Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP15_F_E22
(937 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 34 0.033
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 32 0.10
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 31 0.23
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 29 0.71
SPCC645.07 |rgf1||RhoGEF for Rho1, Rgf1|Schizosaccharomyces pomb... 28 2.2
SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase Ppk29|Schizos... 27 2.9
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 27 5.0
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 26 6.6
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 22 9.8
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 33.9 bits (74), Expect = 0.033
Identities = 17/42 (40%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Frame = +2
Query: 710 PKKXXPPXQGXXXPPPPXKXSPXVPPPXXPPXP--PRXQPRP 829
P+ PP PPPP P PPP PP P P P P
Sbjct: 1694 PQSAAPPQMSAPTPPPPPMSVP--PPPSAPPMPAGPPSAPPP 1733
Score = 28.7 bits (61), Expect = 1.2
Identities = 12/35 (34%), Positives = 13/35 (37%)
Frame = +2
Query: 725 PPXQGXXXPPPPXKXSPXVPPPXXPPXPPRXQPRP 829
PP + PP PPP P PP P P
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMP 1724
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 32.3 bits (70), Expect = 0.10
Identities = 17/54 (31%), Positives = 17/54 (31%)
Frame = +2
Query: 650 KSPPXAGXFSXNXXXXXXXXPKKXXPPXQGXXXPPPPXKXSPXVPPPXXPPXPP 811
KSPP P P G PPPP PP PP PP
Sbjct: 730 KSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 31.1 bits (67), Expect = 0.23
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +2
Query: 725 PPXQGXXXPPPPXKXSPXVPPPXXPP 802
PP PPPP P PPP PP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 28.3 bits (60), Expect = 1.6
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +2
Query: 752 PPPXKXSPXVPPPXXPPXPP 811
PPP P PP PP PP
Sbjct: 9 PPPPPPPPGFEPPSQPPPPP 28
Score = 27.1 bits (57), Expect = 3.8
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = +2
Query: 749 PPPPXKXSPXVPPPXXPPXPP 811
PPPP PP PP PP
Sbjct: 9 PPPPPPPPGFEPPSQPPPPPP 29
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 29.5 bits (63), Expect = 0.71
Identities = 16/42 (38%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Frame = +2
Query: 710 PKKXXPPXQGXXXPPPPXKXSPXVP--PPXXPPXPPRXQPRP 829
P PP Q P P K P P P PP PP+ P P
Sbjct: 168 PSSLPPPAQ----PAAPVKSPPSAPSLPSAVPPMPPKVPPPP 205
Score = 27.9 bits (59), Expect = 2.2
Identities = 15/44 (34%), Positives = 17/44 (38%), Gaps = 4/44 (9%)
Frame = +2
Query: 710 PKKXXPPX-QGXXXPPPPXKXSPXVPPPXX---PPXPPRXQPRP 829
P PP Q PP P +PPP PP P + P P
Sbjct: 125 PSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIP 168
Score = 27.1 bits (57), Expect = 3.8
Identities = 12/34 (35%), Positives = 15/34 (44%)
Frame = +2
Query: 710 PKKXXPPXQGXXXPPPPXKXSPXVPPPXXPPXPP 811
P+ PP PP P K +P +P PP P
Sbjct: 145 PRPSIPPPSPASAPPIPSK-APPIPSSLPPPAQP 177
>SPCC645.07 |rgf1||RhoGEF for Rho1, Rgf1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1334
Score = 27.9 bits (59), Expect = 2.2
Identities = 12/36 (33%), Positives = 15/36 (41%)
Frame = +2
Query: 713 KKXXPPXQGXXXPPPPXKXSPXVPPPXXPPXPPRXQ 820
K PP + P P + + PP PP PP Q
Sbjct: 48 KPLPPPTRRLPRKPLPFRSTSLQPPSSQPPAPPTHQ 83
>SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase
Ppk29|Schizosaccharomyces pombe|chr 2|||Manual
Length = 872
Score = 27.5 bits (58), Expect = 2.9
Identities = 13/35 (37%), Positives = 14/35 (40%)
Frame = +2
Query: 725 PPXQGXXXPPPPXKXSPXVPPPXXPPXPPRXQPRP 829
P QG PPPP +P P P P P P
Sbjct: 349 PQVQGSRPPPPPPMPAPIYNVPNVPTV-PTVSPNP 382
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 26.6 bits (56), Expect = 5.0
Identities = 23/94 (24%), Positives = 28/94 (29%), Gaps = 7/94 (7%)
Frame = +2
Query: 551 PPPRXXIRXPQKP--GXTPRXXXXXXXXXXXPXPXKSPPXAGXFSXNXXXXXXXXPKKXX 724
P P+ + P P P P P +PP + P
Sbjct: 1122 PVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVP---KPSVAAPPVPAPSSGI 1178
Query: 725 PPXQ---GXXXPPPPXKXSPXVPPP--XXPPXPP 811
PP P PP +P VP P PP PP
Sbjct: 1179 PPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPP 1212
Score = 26.6 bits (56), Expect = 5.0
Identities = 11/29 (37%), Positives = 12/29 (41%)
Frame = +2
Query: 728 PXQGXXXPPPPXKXSPXVPPPXXPPXPPR 814
P G P P P VPPP P P+
Sbjct: 1174 PSSGIPPVPKPAAGVPPVPPPSEAPPVPK 1202
Score = 25.8 bits (54), Expect = 8.8
Identities = 10/28 (35%), Positives = 11/28 (39%)
Frame = +2
Query: 725 PPXQGXXXPPPPXKXSPXVPPPXXPPXP 808
PP + P P P PP PP P
Sbjct: 1193 PPSEAPPVPKPSVGVPPVPPPSTAPPVP 1220
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 26.2 bits (55), Expect = 6.6
Identities = 31/134 (23%), Positives = 33/134 (24%), Gaps = 5/134 (3%)
Frame = +2
Query: 443 PHPPXKXXLAXGPPXPXXXXXXXXXXXXXXXXXXXSPPPRXXIRXPQK--PGXTPRXXXX 616
P PP + A PP P S PP P + P P
Sbjct: 352 PLPP-QGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNAS 410
Query: 617 XXXXXXXPXPXKSPPXAGXFSXNXXXXXXXXPKKXXPPXQ-GXXXPPPPXKXSPXVPP-- 787
P P PP A PP PP P PP
Sbjct: 411 RTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLP 470
Query: 788 PXXPPXPPRXQPRP 829
P P PP P P
Sbjct: 471 PAAPAPPPAPAPAP 484
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 22.2 bits (45), Expect(2) = 9.8
Identities = 8/20 (40%), Positives = 9/20 (45%)
Frame = +2
Query: 728 PXQGXXXPPPPXKXSPXVPP 787
P Q P PP P +PP
Sbjct: 229 PKQADPLPAPPPPPPPTLPP 248
Score = 21.4 bits (43), Expect(2) = 9.8
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = +2
Query: 782 PPPXXPPXPPR 814
PPP P PPR
Sbjct: 274 PPPATPSQPPR 284
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,276,651
Number of Sequences: 5004
Number of extensions: 11092
Number of successful extensions: 135
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 90
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 475330268
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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