Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP15_F_E12
         (921 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodops...    23   3.9  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    23   3.9  
AB178034-1|BAD27112.1|   76|Apis mellifera apiceropsin protein.        23   3.9  
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    22   6.8  
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    22   6.8  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              22   9.0  

>U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodopsin
           protein.
          Length = 377

 Score = 23.0 bits (47), Expect = 3.9
 Identities = 14/54 (25%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
 Frame = -2

Query: 329 RNTFASFRVPDIRPVAEALWYVAWAHVVNEIVDF-GILT-VRLGHLRAIQNRMF 174
           +NT A  ++  +  +  +LW++AW   +  +++F GI   V++  L  I   +F
Sbjct: 268 QNTSAECKLAKVALMTISLWFMAWTPYL--VINFSGIFNLVKISPLFTIWGSLF 319


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 23.0 bits (47), Expect = 3.9
 Identities = 8/26 (30%), Positives = 12/26 (46%)
 Frame = +3

Query: 411 FFNTCI*IYIRYIHQNNIFYXKKXPK 488
           F+  C+     Y+H  NI Y    P+
Sbjct: 470 FYTACVVEAFDYLHSRNIIYRDLKPE 495


>AB178034-1|BAD27112.1|   76|Apis mellifera apiceropsin protein.
          Length = 76

 Score = 23.0 bits (47), Expect = 3.9
 Identities = 14/54 (25%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
 Frame = -2

Query: 329 RNTFASFRVPDIRPVAEALWYVAWAHVVNEIVDF-GILT-VRLGHLRAIQNRMF 174
           +NT A  ++  +  +  +LW++AW   +  +++F GI   V++  L  I   +F
Sbjct: 18  QNTSAECKLAKVALMTISLWFMAWTPYL--VINFSGIFNLVKISPLFTIWGSLF 69


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 22.2 bits (45), Expect = 6.8
 Identities = 7/26 (26%), Positives = 17/26 (65%)
 Frame = -1

Query: 459 YFGVCTVYIFICMY*KTVISILQTDT 382
           +  VCTV++F+ +    +++I+  D+
Sbjct: 310 FMSVCTVFVFMALMEYCLVNIVLGDS 335


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 22.2 bits (45), Expect = 6.8
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -3

Query: 793 GGGXDXLXGXKPAPPXPG 740
           G G D + G + A P PG
Sbjct: 101 GSGMDGMGGYRSASPSPG 118


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 21.8 bits (44), Expect = 9.0
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +2

Query: 77  LTMKSFICIVVCCGSCRLRHR 139
           L+  S I + VC   C  RHR
Sbjct: 95  LSPNSTIAVCVCMRKCPRRHR 115


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 226,956
Number of Sequences: 438
Number of extensions: 5191
Number of successful extensions: 17
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29992872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)