Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP15_F_E10
(935 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 33 0.39
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 33 0.39
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 33 0.39
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 33 0.39
Z30317-2|CAA82968.2| 1142|Caenorhabditis elegans Hypothetical pr... 31 1.6
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 31 1.6
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 31 1.6
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 31 1.6
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 31 1.6
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 29 3.6
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 29 3.6
Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical pr... 29 4.8
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 29 4.8
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 29 4.8
AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical... 29 4.8
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 29 4.8
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 29 4.8
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 6.3
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 6.3
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 28 8.3
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 28 8.3
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 28 8.3
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 32.7 bits (71), Expect = 0.39
Identities = 18/55 (32%), Positives = 18/55 (32%)
Frame = -2
Query: 931 GGXXXXGGGXXXXXXXXXXXGGXXXXXXXGXGXGGXXXGXXXXXGGGXGXXXXGG 767
GG GGG GG G G GG G GGG G GG
Sbjct: 131 GGCGGGGGGGCGGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGGGGG 185
Score = 29.1 bits (62), Expect = 4.8
Identities = 17/55 (30%), Positives = 17/55 (30%)
Frame = -2
Query: 931 GGXXXXGGGXXXXXXXXXXXGGXXXXXXXGXGXGGXXXGXXXXXGGGXGXXXXGG 767
GG GGG GG G GG G GGG G GG
Sbjct: 43 GGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGG 97
Score = 28.3 bits (60), Expect = 8.3
Identities = 18/55 (32%), Positives = 18/55 (32%)
Frame = -2
Query: 931 GGXXXXGGGXXXXXXXXXXXGGXXXXXXXGXGXGGXXXGXXXXXGGGXGXXXXGG 767
GG GGG GG G G GG G GGG G GG
Sbjct: 130 GGGCGGGGGGGCGGGGGGGCGG--GGGGCGGGGGGCGGGGGGCGGGGGGGCGGGG 182
Score = 28.3 bits (60), Expect = 8.3
Identities = 18/55 (32%), Positives = 18/55 (32%)
Frame = -2
Query: 931 GGXXXXGGGXXXXXXXXXXXGGXXXXXXXGXGXGGXXXGXXXXXGGGXGXXXXGG 767
GG GGG GG G G GG G GGG G GG
Sbjct: 137 GGGGCGGGGGGGCGGGGGGCGG--GGGGCGGGGGGCGGGGGGGCGGGGGGGCGGG 189
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 32.7 bits (71), Expect = 0.39
Identities = 18/55 (32%), Positives = 18/55 (32%)
Frame = -2
Query: 931 GGXXXXGGGXXXXXXXXXXXGGXXXXXXXGXGXGGXXXGXXXXXGGGXGXXXXGG 767
GG GGG GG G G GG G GGG G GG
Sbjct: 92 GGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGG 146
Score = 30.3 bits (65), Expect = 2.1
Identities = 17/55 (30%), Positives = 17/55 (30%)
Frame = -2
Query: 931 GGXXXXGGGXXXXXXXXXXXGGXXXXXXXGXGXGGXXXGXXXXXGGGXGXXXXGG 767
GG GGG GG G GG G GGG G GG
Sbjct: 112 GGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGGGGGCGGG 166
Score = 30.3 bits (65), Expect = 2.1
Identities = 17/55 (30%), Positives = 17/55 (30%)
Frame = -2
Query: 931 GGXXXXGGGXXXXXXXXXXXGGXXXXXXXGXGXGGXXXGXXXXXGGGXGXXXXGG 767
GG GGG GG G GG G GGG G GG
Sbjct: 120 GGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGGGGGCGGGGGGGCGGG 174
Score = 29.1 bits (62), Expect = 4.8
Identities = 17/55 (30%), Positives = 17/55 (30%)
Frame = -2
Query: 931 GGXXXXGGGXXXXXXXXXXXGGXXXXXXXGXGXGGXXXGXXXXXGGGXGXXXXGG 767
GG GGG GG G GG G GGG G GG
Sbjct: 61 GGGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGG 115
Score = 29.1 bits (62), Expect = 4.8
Identities = 17/55 (30%), Positives = 17/55 (30%)
Frame = -2
Query: 931 GGXXXXGGGXXXXXXXXXXXGGXXXXXXXGXGXGGXXXGXXXXXGGGXGXXXXGG 767
GG GGG GG G GG G GGG G GG
Sbjct: 81 GGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGG 135
Score = 29.1 bits (62), Expect = 4.8
Identities = 17/55 (30%), Positives = 17/55 (30%)
Frame = -2
Query: 931 GGXXXXGGGXXXXXXXXXXXGGXXXXXXXGXGXGGXXXGXXXXXGGGXGXXXXGG 767
GG GGG GG G GG G GGG G GG
Sbjct: 88 GGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGG 142
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 32.7 bits (71), Expect = 0.39
Identities = 18/55 (32%), Positives = 18/55 (32%)
Frame = -2
Query: 931 GGXXXXGGGXXXXXXXXXXXGGXXXXXXXGXGXGGXXXGXXXXXGGGXGXXXXGG 767
GG GGG GG G G GG G GGG G GG
Sbjct: 92 GGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGG 146
Score = 30.3 bits (65), Expect = 2.1
Identities = 17/55 (30%), Positives = 17/55 (30%)
Frame = -2
Query: 931 GGXXXXGGGXXXXXXXXXXXGGXXXXXXXGXGXGGXXXGXXXXXGGGXGXXXXGG 767
GG GGG GG G GG G GGG G GG
Sbjct: 112 GGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGGGGGCGGG 166
Score = 30.3 bits (65), Expect = 2.1
Identities = 17/55 (30%), Positives = 17/55 (30%)
Frame = -2
Query: 931 GGXXXXGGGXXXXXXXXXXXGGXXXXXXXGXGXGGXXXGXXXXXGGGXGXXXXGG 767
GG GGG GG G GG G GGG G GG
Sbjct: 120 GGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGGGGGCGGGGGGGCGGG 174
Score = 29.1 bits (62), Expect = 4.8
Identities = 17/55 (30%), Positives = 17/55 (30%)
Frame = -2
Query: 931 GGXXXXGGGXXXXXXXXXXXGGXXXXXXXGXGXGGXXXGXXXXXGGGXGXXXXGG 767
GG GGG GG G GG G GGG G GG
Sbjct: 61 GGGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGG 115
Score = 29.1 bits (62), Expect = 4.8
Identities = 17/55 (30%), Positives = 17/55 (30%)
Frame = -2
Query: 931 GGXXXXGGGXXXXXXXXXXXGGXXXXXXXGXGXGGXXXGXXXXXGGGXGXXXXGG 767
GG GGG GG G GG G GGG G GG
Sbjct: 81 GGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGG 135
Score = 29.1 bits (62), Expect = 4.8
Identities = 17/55 (30%), Positives = 17/55 (30%)
Frame = -2
Query: 931 GGXXXXGGGXXXXXXXXXXXGGXXXXXXXGXGXGGXXXGXXXXXGGGXGXXXXGG 767
GG GGG GG G GG G GGG G GG
Sbjct: 88 GGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGG 142
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 32.7 bits (71), Expect = 0.39
Identities = 18/55 (32%), Positives = 18/55 (32%)
Frame = -2
Query: 931 GGXXXXGGGXXXXXXXXXXXGGXXXXXXXGXGXGGXXXGXXXXXGGGXGXXXXGG 767
GG GGG GG G G GG G GGG G GG
Sbjct: 77 GGYGGSGGGAFGGFNGGYGQGGYGGGGDFGGGMGGGGYGGGGYGGGGDGGGGYGG 131
Score = 29.5 bits (63), Expect = 3.6
Identities = 17/55 (30%), Positives = 17/55 (30%)
Frame = -2
Query: 931 GGXXXXGGGXXXXXXXXXXXGGXXXXXXXGXGXGGXXXGXXXXXGGGXGXXXXGG 767
GG GGG GG G G G G GGG G GG
Sbjct: 110 GGGGYGGGGYGGGGDGGGGYGGYGGGGYGGMGGGPGGYGMGGYGGGGGGGGDFGG 164
>Z30317-2|CAA82968.2| 1142|Caenorhabditis elegans Hypothetical protein
T16G12.5 protein.
Length = 1142
Score = 30.7 bits (66), Expect = 1.6
Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 4/60 (6%)
Frame = +2
Query: 173 PKEDNSINTLAXSAKKTIEELREKVESALAP----ETVKKNFGTMVDSFNEFYKNLKPAE 340
P ED S N AKK + +L+ V AP T ++ + VD NE+ + L E
Sbjct: 834 PSEDVSFNLAVDEAKKLLRDLKIDVNQVNAPTLPQRTDRQRYNQQVDVCNEWIEELHDDE 893
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 30.7 bits (66), Expect = 1.6
Identities = 16/51 (31%), Positives = 16/51 (31%), Gaps = 2/51 (3%)
Frame = +3
Query: 768 PPXXXXPXPPPXXXXXP--XXXPPXPXPXXXXXXXPPXXXXXXXXXXXPPP 914
PP P PPP P PP P P PP PPP
Sbjct: 736 PPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP 786
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/46 (30%), Positives = 14/46 (30%)
Frame = +2
Query: 785 PPXXPXXXXXSXXXPXPPXXPXXXXXXXPPXXXPXXXXXXPXPPXP 922
PP P P PP P PP P P PP P
Sbjct: 744 PPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPP 789
Score = 28.7 bits (61), Expect = 6.3
Identities = 14/49 (28%), Positives = 14/49 (28%)
Frame = +2
Query: 785 PPXXPXXXXXSXXXPXPPXXPXXXXXXXPPXXXPXXXXXXPXPPXPXPP 931
PP P PP P PP P PP P PP
Sbjct: 742 PPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 790
Score = 28.3 bits (60), Expect = 8.3
Identities = 15/55 (27%), Positives = 15/55 (27%)
Frame = +3
Query: 768 PPXXXXPXPPPXXXXXPXXXPPXPXPXXXXXXXPPXXXXXXXXXXXPPPXXXXPP 932
PP P PPP PP P P PP P PP
Sbjct: 752 PPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPVIPDYLPP 806
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 30.7 bits (66), Expect = 1.6
Identities = 16/51 (31%), Positives = 16/51 (31%), Gaps = 2/51 (3%)
Frame = +3
Query: 768 PPXXXXPXPPPXXXXXP--XXXPPXPXPXXXXXXXPPXXXXXXXXXXXPPP 914
PP P PPP P PP P P PP PPP
Sbjct: 736 PPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP 786
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/46 (30%), Positives = 14/46 (30%)
Frame = +2
Query: 785 PPXXPXXXXXSXXXPXPPXXPXXXXXXXPPXXXPXXXXXXPXPPXP 922
PP P P PP P PP P P PP P
Sbjct: 744 PPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPP 789
Score = 28.7 bits (61), Expect = 6.3
Identities = 14/49 (28%), Positives = 14/49 (28%)
Frame = +2
Query: 785 PPXXPXXXXXSXXXPXPPXXPXXXXXXXPPXXXPXXXXXXPXPPXPXPP 931
PP P PP P PP P PP P PP
Sbjct: 742 PPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 790
Score = 28.3 bits (60), Expect = 8.3
Identities = 15/55 (27%), Positives = 15/55 (27%)
Frame = +3
Query: 768 PPXXXXPXPPPXXXXXPXXXPPXPXPXXXXXXXPPXXXXXXXXXXXPPPXXXXPP 932
PP P PPP PP P P PP P PP
Sbjct: 752 PPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPVIPDYLPP 806
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 30.7 bits (66), Expect = 1.6
Identities = 17/68 (25%), Positives = 17/68 (25%)
Frame = +3
Query: 729 FXXXXGXGXXXXXPPXXXXPXPPPXXXXXPXXXPPXPXPXXXXXXXPPXXXXXXXXXXXP 908
F G PP P PPP P P PP P
Sbjct: 453 FPISTGPSYSSTTPPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPPLPPIATPSSVP 512
Query: 909 PPXXXXPP 932
PP PP
Sbjct: 513 PPPPPPPP 520
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 30.7 bits (66), Expect = 1.6
Identities = 16/51 (31%), Positives = 16/51 (31%), Gaps = 2/51 (3%)
Frame = +3
Query: 768 PPXXXXPXPPPXXXXXP--XXXPPXPXPXXXXXXXPPXXXXXXXXXXXPPP 914
PP P PPP P PP P P PP PPP
Sbjct: 319 PPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP 369
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/46 (30%), Positives = 14/46 (30%)
Frame = +2
Query: 785 PPXXPXXXXXSXXXPXPPXXPXXXXXXXPPXXXPXXXXXXPXPPXP 922
PP P P PP P PP P P PP P
Sbjct: 327 PPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPP 372
Score = 28.7 bits (61), Expect = 6.3
Identities = 14/49 (28%), Positives = 14/49 (28%)
Frame = +2
Query: 785 PPXXPXXXXXSXXXPXPPXXPXXXXXXXPPXXXPXXXXXXPXPPXPXPP 931
PP P PP P PP P PP P PP
Sbjct: 325 PPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 373
Score = 28.3 bits (60), Expect = 8.3
Identities = 15/55 (27%), Positives = 15/55 (27%)
Frame = +3
Query: 768 PPXXXXPXPPPXXXXXPXXXPPXPXPXXXXXXXPPXXXXXXXXXXXPPPXXXXPP 932
PP P PPP PP P P PP P PP
Sbjct: 335 PPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPVIPDYLPP 389
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 29.5 bits (63), Expect = 3.6
Identities = 17/55 (30%), Positives = 17/55 (30%)
Frame = -2
Query: 931 GGXXXXGGGXXXXXXXXXXXGGXXXXXXXGXGXGGXXXGXXXXXGGGXGXXXXGG 767
GG GGG GG G G G G GGG G GG
Sbjct: 70 GGWGNNGGGGNWGGNGGGGNGGGGRGGGGGGGGGRGGGGGGRGGGGGGGGGRGGG 124
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 29.5 bits (63), Expect = 3.6
Identities = 14/47 (29%), Positives = 14/47 (29%)
Frame = +3
Query: 792 PPPXXXXXPXXXPPXPXPXXXXXXXPPXXXXXXXXXXXPPPXXXXPP 932
PPP P P P P PP PPP PP
Sbjct: 32 PPPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPPPP 78
Score = 29.1 bits (62), Expect = 4.8
Identities = 17/68 (25%), Positives = 17/68 (25%)
Frame = +3
Query: 729 FXXXXGXGXXXXXPPXXXXPXPPPXXXXXPXXXPPXPXPXXXXXXXPPXXXXXXXXXXXP 908
F G PP PPP P PP P PP P
Sbjct: 19 FGGCCSMGPPPCPPPPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPPPP 78
Query: 909 PPXXXXPP 932
PP P
Sbjct: 79 PPMPSYSP 86
>Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical
protein C56A3.1 protein.
Length = 393
Score = 29.1 bits (62), Expect = 4.8
Identities = 19/63 (30%), Positives = 19/63 (30%)
Frame = -2
Query: 931 GGXXXXGGGXXXXXXXXXXXGGXXXXXXXGXGXGGXXXGXXXXXGGGXGXXXXGGKXXXX 752
GG GGG GG G G GG G GGG G GG
Sbjct: 86 GGGGCGGGGCGGGGGGCGGGGGCGGGGGGGCGGGGGG-GCGGGGGGGGGGYASGGSGGFA 144
Query: 751 PXP 743
P
Sbjct: 145 SAP 147
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 29.1 bits (62), Expect = 4.8
Identities = 14/49 (28%), Positives = 14/49 (28%)
Frame = +3
Query: 786 PXPPPXXXXXPXXXPPXPXPXXXXXXXPPXXXXXXXXXXXPPPXXXXPP 932
P PPP PP P P PP PP PP
Sbjct: 124 PPPPPRKSRAGGSSPPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPP 172
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 29.1 bits (62), Expect = 4.8
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +3
Query: 768 PPXXXXPXPPPXXXXXPXXXPPXPXP 845
PP P PPP P PP P P
Sbjct: 66 PPPPICPPPPPPPMPCPPPPPPMPRP 91
>AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical
protein Y116A8C.35 protein.
Length = 285
Score = 29.1 bits (62), Expect = 4.8
Identities = 17/55 (30%), Positives = 17/55 (30%)
Frame = -2
Query: 931 GGXXXXGGGXXXXXXXXXXXGGXXXXXXXGXGXGGXXXGXXXXXGGGXGXXXXGG 767
GG GGG GG G G GG G GGG GG
Sbjct: 217 GGGGGGGGGGYGSGGGWGGGGGGRDRDRGGWGGGGGGRGYGGGGGGGGYGYGGGG 271
Score = 28.7 bits (61), Expect = 6.3
Identities = 18/55 (32%), Positives = 18/55 (32%)
Frame = -2
Query: 931 GGXXXXGGGXXXXXXXXXXXGGXXXXXXXGXGXGGXXXGXXXXXGGGXGXXXXGG 767
GG GGG GG G G GG G GGG G GG
Sbjct: 216 GGGGGGGGGGGYGSGGGWGGGGGGRDRDRG-GWGGGGGGRGYGGGGGGGGYGYGG 269
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 29.1 bits (62), Expect = 4.8
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +3
Query: 768 PPXXXXPXPPPXXXXXPXXXPPXPXP 845
PP P PPP P PP P P
Sbjct: 1338 PPPPPPPPPPPSDDLTPVPPPPPPPP 1363
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 29.1 bits (62), Expect = 4.8
Identities = 12/34 (35%), Positives = 12/34 (35%)
Frame = +2
Query: 827 PXPPXXPXXXXXXXPPXXXPXXXXXXPXPPXPXP 928
P PP P PP P P PP P P
Sbjct: 563 PPPPPLPQNLSGAPPPPPPPPPMLGGPPPPPPPP 596
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 28.7 bits (61), Expect = 6.3
Identities = 14/49 (28%), Positives = 14/49 (28%)
Frame = +3
Query: 786 PXPPPXXXXXPXXXPPXPXPXXXXXXXPPXXXXXXXXXXXPPPXXXXPP 932
P PPP P P P P PP PPP P
Sbjct: 262 PVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGP 310
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 28.7 bits (61), Expect = 6.3
Identities = 14/49 (28%), Positives = 14/49 (28%)
Frame = +3
Query: 786 PXPPPXXXXXPXXXPPXPXPXXXXXXXPPXXXXXXXXXXXPPPXXXXPP 932
P PPP P P P P PP PPP P
Sbjct: 272 PVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGP 320
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 28.3 bits (60), Expect = 8.3
Identities = 16/54 (29%), Positives = 16/54 (29%), Gaps = 5/54 (9%)
Frame = +2
Query: 785 PPXXPXXXXXSXXXPXPPXX-----PXXXXXXXPPXXXPXXXXXXPXPPXPXPP 931
PP P P PP P PP P P PP P PP
Sbjct: 202 PPPVPLTSNIPQAPPAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPPPPPP 255
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 28.3 bits (60), Expect = 8.3
Identities = 16/54 (29%), Positives = 16/54 (29%), Gaps = 5/54 (9%)
Frame = +2
Query: 785 PPXXPXXXXXSXXXPXPPXX-----PXXXXXXXPPXXXPXXXXXXPXPPXPXPP 931
PP P P PP P PP P P PP P PP
Sbjct: 188 PPPVPLTSNIPQAPPAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPPPPPP 241
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 28.3 bits (60), Expect = 8.3
Identities = 16/54 (29%), Positives = 16/54 (29%), Gaps = 5/54 (9%)
Frame = +2
Query: 785 PPXXPXXXXXSXXXPXPPXX-----PXXXXXXXPPXXXPXXXXXXPXPPXPXPP 931
PP P P PP P PP P P PP P PP
Sbjct: 188 PPPVPLTSNIPQAPPAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPPPPPP 241
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,089,442
Number of Sequences: 27780
Number of extensions: 252213
Number of successful extensions: 1231
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 614
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 964
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2412704140
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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