Bombyx BLAST Result against spombe

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP15_F_E07
         (873 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAC8E11.10 |||sorbose reductase |Schizosaccharomyces pombe|chr ...    32   0.12 
SPBP23A10.11c |||conserved fungal protein|Schizosaccharomyces po...    28   1.5  
SPBC27B12.06 |gpi13||pig-O |Schizosaccharomyces pombe|chr 2|||Ma...    28   1.5  
SPAC23H3.04 |||conserved fungal protein|Schizosaccharomyces pomb...    26   6.1  
SPAC56F8.12 |||conserved fungal protein|Schizosaccharomyces pomb...    26   6.1  

>SPAC8E11.10 |||sorbose reductase |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 255

 Score = 31.9 bits (69), Expect = 0.12
 Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
 Frame = +1

Query: 118 MLAASAGVV--ELSADTSNQDLXXKLYNSILTGDYDSAVRQSLEYESQGKGS 267
           ++ A+AG+    LS +  N+D+  K+    L G Y +A      ++ QGKGS
Sbjct: 91  VMIANAGIAIPHLSLEDKNEDIWTKVVGINLNGAYYTAQAAGHHFKKQGKGS 142


>SPBP23A10.11c |||conserved fungal protein|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 507

 Score = 28.3 bits (60), Expect = 1.5
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = +1

Query: 580 HNTKYNQYLKMSTTTCNCNSRDRVVYGGXSADSTRE 687
           +++ YN+   M T++C+C+S  +  YGG  A    E
Sbjct: 47  YSSTYNEITNMDTSSCSCSSTPK-SYGGNLAPFDEE 81


>SPBC27B12.06 |gpi13||pig-O |Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 918

 Score = 28.3 bits (60), Expect = 1.5
 Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 5/42 (11%)
 Frame = -1

Query: 381 WEVLXNNFLS--VADPQL---VAVLHGVPSXVNDQVVNYIXD 271
           W+VL +++L+  ++ P     V  LHGV + VN  V +YI D
Sbjct: 188 WDVLFHDYLNETLSQPAFSFNVPDLHGVDNKVNQYVFDYIKD 229


>SPAC23H3.04 |||conserved fungal protein|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 300

 Score = 26.2 bits (55), Expect = 6.1
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = -1

Query: 243 FQALTDSTVVVAGEDAVVQFXLEVLV 166
           F  +T   V+V  EDAVV+F L +LV
Sbjct: 181 FLGVTVQYVMVLPEDAVVEFVLTILV 206


>SPAC56F8.12 |||conserved fungal protein|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 394

 Score = 26.2 bits (55), Expect = 6.1
 Identities = 10/35 (28%), Positives = 20/35 (57%)
 Frame = +1

Query: 640 RDRVVYGGXSADSTREQWFFQPAKYXNXVLFFIYN 744
           R R+V G  +A  + + W F   +Y   ++F+++N
Sbjct: 162 RQRIVVGKHAAHFSLDHWIF-VVEYYAPIVFYVFN 195


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,986,529
Number of Sequences: 5004
Number of extensions: 55278
Number of successful extensions: 172
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 166
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 172
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 436477420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)