Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP15_F_E06
(891 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 193 1e-49
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 193 1e-49
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 193 1e-49
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 193 1e-49
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 193 1e-49
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 193 1e-49
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 193 1e-49
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 193 1e-49
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 193 1e-49
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 192 4e-49
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 192 4e-49
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 116 2e-26
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 97 1e-20
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 97 1e-20
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 96 3e-20
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 96 3e-20
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 94 1e-19
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 93 2e-19
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 65 7e-11
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 38 0.013
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 38 0.013
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 32 0.63
Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical pr... 31 0.84
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 31 1.1
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 31 1.1
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 31 1.1
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 31 1.1
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 31 1.5
AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen pro... 30 2.6
AF067937-4|AAF99911.2| 352|Caenorhabditis elegans Hypothetical ... 29 3.4
Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical pr... 29 5.9
AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical ... 28 7.8
AC199170-9|ABO33267.1| 388|Caenorhabditis elegans Hypothetical ... 28 7.8
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 193 bits (471), Expect = 1e-49
Identities = 86/88 (97%), Positives = 88/88 (100%)
Frame = +3
Query: 246 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 425
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
Query: 426 VLLTEAPLNPKANREKMTQIMFETFNSP 509
VLLTEAPLNPKANREKMTQIMFETFN+P
Sbjct: 104 VLLTEAPLNPKANREKMTQIMFETFNTP 131
Score = 95.9 bits (228), Expect = 3e-20
Identities = 42/43 (97%), Positives = 43/43 (100%)
Frame = +2
Query: 116 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 244
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
Score = 95.1 bits (226), Expect = 6e-20
Identities = 47/57 (82%), Positives = 51/57 (89%)
Frame = +1
Query: 508 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYQGYALAHAHPPVWDLAGXDL 678
PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIY+GYAL HA + DLAG DL
Sbjct: 131 PAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRL-DLAGRDL 186
Score = 33.1 bits (72), Expect = 0.27
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +2
Query: 680 TDYLMKILTEXGYSF 724
TDYLMKILTE GYSF
Sbjct: 187 TDYLMKILTERGYSF 201
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 193 bits (471), Expect = 1e-49
Identities = 86/88 (97%), Positives = 88/88 (100%)
Frame = +3
Query: 246 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 425
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
Query: 426 VLLTEAPLNPKANREKMTQIMFETFNSP 509
VLLTEAPLNPKANREKMTQIMFETFN+P
Sbjct: 104 VLLTEAPLNPKANREKMTQIMFETFNTP 131
Score = 97.5 bits (232), Expect = 1e-20
Identities = 43/43 (100%), Positives = 43/43 (100%)
Frame = +2
Query: 116 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 244
MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
Score = 95.5 bits (227), Expect = 5e-20
Identities = 48/57 (84%), Positives = 51/57 (89%)
Frame = +1
Query: 508 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYQGYALAHAHPPVWDLAGXDL 678
PAMYVAIQAVLSLYASGRTTGIVLDSGDGV+HTVPIY+GYAL HA + DLAG DL
Sbjct: 131 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRL-DLAGRDL 186
Score = 33.1 bits (72), Expect = 0.27
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +2
Query: 680 TDYLMKILTEXGYSF 724
TDYLMKILTE GYSF
Sbjct: 187 TDYLMKILTERGYSF 201
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 193 bits (471), Expect = 1e-49
Identities = 86/88 (97%), Positives = 88/88 (100%)
Frame = +3
Query: 246 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 425
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
Query: 426 VLLTEAPLNPKANREKMTQIMFETFNSP 509
VLLTEAPLNPKANREKMTQIMFETFN+P
Sbjct: 104 VLLTEAPLNPKANREKMTQIMFETFNTP 131
Score = 95.9 bits (228), Expect = 3e-20
Identities = 42/43 (97%), Positives = 43/43 (100%)
Frame = +2
Query: 116 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 244
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
Score = 95.1 bits (226), Expect = 6e-20
Identities = 47/57 (82%), Positives = 51/57 (89%)
Frame = +1
Query: 508 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYQGYALAHAHPPVWDLAGXDL 678
PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIY+GYAL HA + DLAG DL
Sbjct: 131 PAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRL-DLAGRDL 186
Score = 33.1 bits (72), Expect = 0.27
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +2
Query: 680 TDYLMKILTEXGYSF 724
TDYLMKILTE GYSF
Sbjct: 187 TDYLMKILTERGYSF 201
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 193 bits (471), Expect = 1e-49
Identities = 86/88 (97%), Positives = 88/88 (100%)
Frame = +3
Query: 246 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 425
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
Query: 426 VLLTEAPLNPKANREKMTQIMFETFNSP 509
VLLTEAPLNPKANREKMTQIMFETFN+P
Sbjct: 104 VLLTEAPLNPKANREKMTQIMFETFNTP 131
Score = 95.9 bits (228), Expect = 3e-20
Identities = 42/43 (97%), Positives = 43/43 (100%)
Frame = +2
Query: 116 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 244
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
Score = 95.1 bits (226), Expect = 6e-20
Identities = 47/57 (82%), Positives = 51/57 (89%)
Frame = +1
Query: 508 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYQGYALAHAHPPVWDLAGXDL 678
PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIY+GYAL HA + DLAG DL
Sbjct: 131 PAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRL-DLAGRDL 186
Score = 33.1 bits (72), Expect = 0.27
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +2
Query: 680 TDYLMKILTEXGYSF 724
TDYLMKILTE GYSF
Sbjct: 187 TDYLMKILTERGYSF 201
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 193 bits (471), Expect = 1e-49
Identities = 86/88 (97%), Positives = 88/88 (100%)
Frame = +3
Query: 246 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 425
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
Query: 426 VLLTEAPLNPKANREKMTQIMFETFNSP 509
VLLTEAPLNPKANREKMTQIMFETFN+P
Sbjct: 104 VLLTEAPLNPKANREKMTQIMFETFNTP 131
Score = 95.9 bits (228), Expect = 3e-20
Identities = 42/43 (97%), Positives = 43/43 (100%)
Frame = +2
Query: 116 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 244
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
Score = 95.1 bits (226), Expect = 6e-20
Identities = 47/57 (82%), Positives = 51/57 (89%)
Frame = +1
Query: 508 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYQGYALAHAHPPVWDLAGXDL 678
PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIY+GYAL HA + DLAG DL
Sbjct: 131 PAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRL-DLAGRDL 186
Score = 33.1 bits (72), Expect = 0.27
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +2
Query: 680 TDYLMKILTEXGYSF 724
TDYLMKILTE GYSF
Sbjct: 187 TDYLMKILTERGYSF 201
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 193 bits (471), Expect = 1e-49
Identities = 86/88 (97%), Positives = 88/88 (100%)
Frame = +3
Query: 246 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 425
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
Query: 426 VLLTEAPLNPKANREKMTQIMFETFNSP 509
VLLTEAPLNPKANREKMTQIMFETFN+P
Sbjct: 104 VLLTEAPLNPKANREKMTQIMFETFNTP 131
Score = 95.9 bits (228), Expect = 3e-20
Identities = 41/43 (95%), Positives = 43/43 (100%)
Frame = +2
Query: 116 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 244
MCDDDVAAL++DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
Score = 95.5 bits (227), Expect = 5e-20
Identities = 48/57 (84%), Positives = 51/57 (89%)
Frame = +1
Query: 508 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYQGYALAHAHPPVWDLAGXDL 678
PAMYVAIQAVLSLYASGRTTGIVLDSGDGV+HTVPIY+GYAL HA + DLAG DL
Sbjct: 131 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRL-DLAGRDL 186
Score = 33.1 bits (72), Expect = 0.27
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +2
Query: 680 TDYLMKILTEXGYSF 724
TDYLMKILTE GYSF
Sbjct: 187 TDYLMKILTERGYSF 201
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 193 bits (471), Expect = 1e-49
Identities = 86/88 (97%), Positives = 88/88 (100%)
Frame = +3
Query: 246 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 425
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
Query: 426 VLLTEAPLNPKANREKMTQIMFETFNSP 509
VLLTEAPLNPKANREKMTQIMFETFN+P
Sbjct: 104 VLLTEAPLNPKANREKMTQIMFETFNTP 131
Score = 95.9 bits (228), Expect = 3e-20
Identities = 42/43 (97%), Positives = 43/43 (100%)
Frame = +2
Query: 116 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 244
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
Score = 95.1 bits (226), Expect = 6e-20
Identities = 47/57 (82%), Positives = 51/57 (89%)
Frame = +1
Query: 508 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYQGYALAHAHPPVWDLAGXDL 678
PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIY+GYAL HA + DLAG DL
Sbjct: 131 PAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRL-DLAGRDL 186
Score = 33.1 bits (72), Expect = 0.27
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +2
Query: 680 TDYLMKILTEXGYSF 724
TDYLMKILTE GYSF
Sbjct: 187 TDYLMKILTERGYSF 201
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 193 bits (471), Expect = 1e-49
Identities = 86/88 (97%), Positives = 88/88 (100%)
Frame = +3
Query: 246 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 425
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 30 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 89
Query: 426 VLLTEAPLNPKANREKMTQIMFETFNSP 509
VLLTEAPLNPKANREKMTQIMFETFN+P
Sbjct: 90 VLLTEAPLNPKANREKMTQIMFETFNTP 117
Score = 95.1 bits (226), Expect = 6e-20
Identities = 47/57 (82%), Positives = 51/57 (89%)
Frame = +1
Query: 508 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYQGYALAHAHPPVWDLAGXDL 678
PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIY+GYAL HA + DLAG DL
Sbjct: 117 PAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRL-DLAGRDL 172
Score = 56.8 bits (131), Expect = 2e-08
Identities = 24/25 (96%), Positives = 25/25 (100%)
Frame = +2
Query: 170 KAGFAGDDAPRAVFPSIVGRPRHQG 244
+AGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQG 29
Score = 33.1 bits (72), Expect = 0.27
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +2
Query: 680 TDYLMKILTEXGYSF 724
TDYLMKILTE GYSF
Sbjct: 173 TDYLMKILTERGYSF 187
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 193 bits (471), Expect = 1e-49
Identities = 86/88 (97%), Positives = 88/88 (100%)
Frame = +3
Query: 246 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 425
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
Query: 426 VLLTEAPLNPKANREKMTQIMFETFNSP 509
VLLTEAPLNPKANREKMTQIMFETFN+P
Sbjct: 104 VLLTEAPLNPKANREKMTQIMFETFNTP 131
Score = 95.9 bits (228), Expect = 3e-20
Identities = 42/43 (97%), Positives = 43/43 (100%)
Frame = +2
Query: 116 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 244
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
Score = 95.1 bits (226), Expect = 6e-20
Identities = 47/57 (82%), Positives = 51/57 (89%)
Frame = +1
Query: 508 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYQGYALAHAHPPVWDLAGXDL 678
PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIY+GYAL HA + DLAG DL
Sbjct: 131 PAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRL-DLAGRDL 186
Score = 33.1 bits (72), Expect = 0.27
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +2
Query: 680 TDYLMKILTEXGYSF 724
TDYLMKILTE GYSF
Sbjct: 187 TDYLMKILTERGYSF 201
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 192 bits (467), Expect = 4e-49
Identities = 84/88 (95%), Positives = 88/88 (100%)
Frame = +3
Query: 246 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 425
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELR+APEEHP
Sbjct: 43 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHP 102
Query: 426 VLLTEAPLNPKANREKMTQIMFETFNSP 509
VLLTEAPLNPK+NREKMTQIMFETFN+P
Sbjct: 103 VLLTEAPLNPKSNREKMTQIMFETFNTP 130
Score = 92.7 bits (220), Expect = 3e-19
Identities = 46/57 (80%), Positives = 50/57 (87%)
Frame = +1
Query: 508 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYQGYALAHAHPPVWDLAGXDL 678
PAMYV IQAVLSLYASGRTTGIVLD+GDGV+HTVPIY+GYAL HA + DLAG DL
Sbjct: 130 PAMYVNIQAVLSLYASGRTTGIVLDTGDGVTHTVPIYEGYALPHAIQRL-DLAGRDL 185
Score = 86.6 bits (205), Expect = 2e-17
Identities = 37/41 (90%), Positives = 41/41 (100%)
Frame = +2
Query: 122 DDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 244
++++AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 42
Score = 31.1 bits (67), Expect = 1.1
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = +2
Query: 680 TDYLMKILTEXGYSF 724
TDY+MKILTE GY+F
Sbjct: 186 TDYMMKILTERGYTF 200
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 192 bits (467), Expect = 4e-49
Identities = 85/87 (97%), Positives = 87/87 (100%)
Frame = +3
Query: 249 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPV 428
MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPV
Sbjct: 1 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 60
Query: 429 LLTEAPLNPKANREKMTQIMFETFNSP 509
LLTEAPLNPKANREKMTQIMFETFN+P
Sbjct: 61 LLTEAPLNPKANREKMTQIMFETFNTP 87
Score = 95.1 bits (226), Expect = 6e-20
Identities = 47/57 (82%), Positives = 51/57 (89%)
Frame = +1
Query: 508 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYQGYALAHAHPPVWDLAGXDL 678
PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIY+GYAL HA + DLAG DL
Sbjct: 87 PAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRL-DLAGRDL 142
Score = 33.1 bits (72), Expect = 0.27
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +2
Query: 680 TDYLMKILTEXGYSF 724
TDYLMKILTE GYSF
Sbjct: 143 TDYLMKILTERGYSF 157
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 116 bits (280), Expect = 2e-26
Identities = 49/89 (55%), Positives = 67/89 (75%), Gaps = 1/89 (1%)
Frame = +3
Query: 246 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTF-YNELRVAPEEH 422
VM G D ++G +A+S RG+ +++YP+EHGI+ NW DMEKIW + F ++L++ PEEH
Sbjct: 46 VMAGGLDGDIFIGPKAESNRGLFSIEYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEH 105
Query: 423 PVLLTEAPLNPKANREKMTQIMFETFNSP 509
PVLLT+APLNP NRE+ +I FETFN P
Sbjct: 106 PVLLTDAPLNPLKNRERSAEIFFETFNVP 134
Score = 80.6 bits (190), Expect = 1e-15
Identities = 37/57 (64%), Positives = 48/57 (84%)
Frame = +1
Query: 508 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYQGYALAHAHPPVWDLAGXDL 678
PA+Y+ +QAVLSLYA+GRTTG+VLDSGDGV+H VPI +G+A+ HA + DLAG D+
Sbjct: 134 PALYIQMQAVLSLYATGRTTGVVLDSGDGVTHAVPIVKGFAMKHAIQRM-DLAGRDV 189
Score = 47.2 bits (107), Expect = 2e-05
Identities = 22/42 (52%), Positives = 30/42 (71%), Gaps = 3/42 (7%)
Frame = +2
Query: 122 DDDVAA---LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH 238
D DV A +V+DNGSG+ KAGFAG+ P+ F + VGRP++
Sbjct: 2 DYDVIANQPVVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKY 43
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 97.5 bits (232), Expect = 1e-20
Identities = 43/43 (100%), Positives = 43/43 (100%)
Frame = +2
Query: 116 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 244
MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
Score = 95.1 bits (226), Expect = 6e-20
Identities = 42/43 (97%), Positives = 43/43 (100%)
Frame = +3
Query: 246 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKI 374
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKI
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 97.5 bits (232), Expect = 1e-20
Identities = 43/43 (100%), Positives = 43/43 (100%)
Frame = +2
Query: 116 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 244
MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
Score = 89.4 bits (212), Expect = 3e-18
Identities = 39/40 (97%), Positives = 40/40 (100%)
Frame = +3
Query: 246 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDM 365
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDM
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM 83
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 95.9 bits (228), Expect = 3e-20
Identities = 42/43 (97%), Positives = 43/43 (100%)
Frame = +2
Query: 116 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 244
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
Score = 95.1 bits (226), Expect = 6e-20
Identities = 42/43 (97%), Positives = 43/43 (100%)
Frame = +3
Query: 246 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKI 374
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKI
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 95.9 bits (228), Expect = 3e-20
Identities = 42/43 (97%), Positives = 43/43 (100%)
Frame = +2
Query: 116 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 244
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
Score = 95.1 bits (226), Expect = 6e-20
Identities = 42/43 (97%), Positives = 43/43 (100%)
Frame = +3
Query: 246 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKI 374
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKI
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 93.9 bits (223), Expect = 1e-19
Identities = 44/90 (48%), Positives = 55/90 (61%), Gaps = 1/90 (1%)
Frame = +3
Query: 246 VMVGMGQKDSYVGDEAQSKRGI-LTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEH 422
V G+ D ++GDEA S T+KYPI HGI+ +WD ME+ W + LR PE+H
Sbjct: 56 VGAGIDDLDFFIGDEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDH 115
Query: 423 PVLLTEAPLNPKANREKMTQIMFETFNSPG 512
LLTE PLN NRE +IMFE+FN PG
Sbjct: 116 FFLLTEPPLNTPENREYTAEIMFESFNVPG 145
Score = 50.8 bits (116), Expect = 1e-06
Identities = 26/65 (40%), Positives = 40/65 (61%), Gaps = 8/65 (12%)
Frame = +1
Query: 508 PAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVSHTVPIYQGYALAHAHPPVWDL 663
P +Y+A+QAVL+L AS + TG+V+DSGDGV+H +P+ GY + + +
Sbjct: 144 PGLYIAVQAVLALTASWNSREANERSLTGLVIDSGDGVTHCIPVADGYVIGSCIKHI-PI 202
Query: 664 AGXDL 678
AG D+
Sbjct: 203 AGRDI 207
Score = 35.5 bits (78), Expect = 0.051
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +2
Query: 116 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 223
M + A V+DNG+G K G+AG+ P+ + PS +
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAI 36
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 93.1 bits (221), Expect = 2e-19
Identities = 48/107 (44%), Positives = 67/107 (62%), Gaps = 1/107 (0%)
Frame = +3
Query: 183 PATTRPAPSSRPSWVALATRXVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDD 362
PA P+ RP + +T+ V + KD VG+E R +L + YP+++GI+ NWDD
Sbjct: 28 PAHIFPSMVGRP--IVRSTQRVG-NIEIKDLMVGEECSQLRQMLDINYPMDNGIVRNWDD 84
Query: 363 MEKIWHHTFYNE-LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 500
M +W HTF E L + P+E +LLTE PLNP +NREKM Q+MFE +
Sbjct: 85 MAHVWDHTFGPEKLDIDPKECKLLLTEPPLNPNSNREKMFQVMFEQY 131
Score = 70.9 bits (166), Expect = 1e-12
Identities = 31/58 (53%), Positives = 45/58 (77%)
Frame = +1
Query: 511 AMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYQGYALAHAHPPVWDLAGXDLNR 684
++YVA+QAVL+LYA G TG+V+DSGDGV+H P+Y+G+AL H + D+AG D+ +
Sbjct: 135 SIYVAVQAVLTLYAQGLLTGVVVDSGDGVTHICPVYEGFALHHLTRRL-DIAGRDITK 191
Score = 45.6 bits (103), Expect = 5e-05
Identities = 18/31 (58%), Positives = 24/31 (77%)
Frame = +2
Query: 140 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 232
+VVDNG+G K G+AG + P +FPS+VGRP
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRP 39
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 64.9 bits (151), Expect = 7e-11
Identities = 28/62 (45%), Positives = 41/62 (66%)
Frame = +3
Query: 330 IEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSP 509
++ G+I +W+ EKI H++ N L P EHPVL +E+ N +A REK+T+IMFE F P
Sbjct: 94 MKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLFSESSWNDRARREKLTEIMFEKFQVP 153
Query: 510 GH 515
+
Sbjct: 154 AY 155
Score = 50.4 bits (115), Expect = 2e-06
Identities = 21/45 (46%), Positives = 31/45 (68%)
Frame = +1
Query: 508 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYQGYALAHA 642
PA Y++ VLS +A GRT G+++DSG + VP++ GYA+ HA
Sbjct: 153 PAYYLSKNVVLSCFAQGRTHGLMVDSGATQTSVVPVFDGYAVTHA 197
Score = 33.9 bits (74), Expect = 0.16
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +2
Query: 125 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 223
D+V+ LV D GS + GFAG++ P+ PS +
Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYI 41
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 37.5 bits (83), Expect = 0.013
Identities = 23/81 (28%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Frame = +3
Query: 264 QKDSYVGDEAQSKRGILTLKY--PIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLT 437
+K +V E + +L Y PIE G + NWD ++IW TF + V + LT
Sbjct: 39 KKRVFVAHEQEECSDKFSLFYVRPIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALT 97
Query: 438 EAPLNPKANREKMTQIMFETF 500
+ A + ++I+F+ F
Sbjct: 98 DNNYLIPALPDVSSEILFDYF 118
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 37.5 bits (83), Expect = 0.013
Identities = 23/81 (28%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Frame = +3
Query: 264 QKDSYVGDEAQSKRGILTLKY--PIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLT 437
+K +V E + +L Y PIE G + NWD ++IW TF + V + LT
Sbjct: 39 KKRVFVAHEQEECSDKFSLFYVRPIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALT 97
Query: 438 EAPLNPKANREKMTQIMFETF 500
+ A + ++I+F+ F
Sbjct: 98 DNNYLIPALPDVSSEILFDYF 118
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 31.9 bits (69), Expect = 0.63
Identities = 17/38 (44%), Positives = 23/38 (60%)
Frame = +1
Query: 529 QAVLSLYASGRTTGIVLDSGDGVSHTVPIYQGYALAHA 642
Q L LYA TTG+V+D G+ V + VP+ GY + A
Sbjct: 310 QPSLILYAYDVTTGVVVDIGERV-NIVPVIDGYVVESA 346
>Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical
protein T10B10.1 protein.
Length = 428
Score = 31.5 bits (68), Expect = 0.84
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +3
Query: 147 STMAPACARPVSPATTRPAPSSRP 218
+T AP PATTRPAP+S+P
Sbjct: 317 ATRAPPATTRAPPATTRPAPASQP 340
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical
protein W01B6.7 protein.
Length = 301
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = -1
Query: 294 GPRHPRRSLSGPYRPSRPWWRGRPTMDGKTARGASSPAKPALHMP 160
GP P S P +P +P G P G +GAS+P +P P
Sbjct: 105 GPPGPGGSPGKPGKPGKP---GAPGAPGNPGKGASAPCEPVTQPP 146
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = -1
Query: 294 GPRHPRRSLSGPYRPSRPWWRGRPTMDGKTARGASSPAKPALHMP 160
GP P S P +P +P G P G +GAS+P +P P
Sbjct: 105 GPPGPGGSPGKPGKPGKP---GAPGAPGNPGKGASAPCEPVTQPP 146
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 2 (col-2) gene, complete
cds. ).
Length = 301
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = -1
Query: 294 GPRHPRRSLSGPYRPSRPWWRGRPTMDGKTARGASSPAKPALHMP 160
GP P S P +P +P G P G +GAS+P +P P
Sbjct: 105 GPPGPGGSPGKPGKPGKP---GAPGAPGNPGKGASAPCEPVTQPP 146
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = -1
Query: 294 GPRHPRRSLSGPYRPSRPWWRGRPTMDGKTARGASSPAKPALHMP 160
GP P S P +P +P G P G +GAS+P +P P
Sbjct: 105 GPPGPGGSPGKPGKPGKP---GAPGAPGNPGKGASAPCEPVTQPP 146
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 30.7 bits (66), Expect = 1.5
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -2
Query: 596 TPSPESSTIPVVRPEAYSESTAWMATYMA 510
TP P SST+PVV P ++ T +Y+A
Sbjct: 865 TPQPLSSTMPVVAPSTSTQPTPTTGSYLA 893
>AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen
protein 142 protein.
Length = 325
Score = 29.9 bits (64), Expect = 2.6
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = -1
Query: 294 GPRHPRRSLSGPYRPSRPWWRGRPTMDGKTARGASSPA 181
GPR P P +P P G P G+ +RG P+
Sbjct: 170 GPRGPAGDAGSPGQPGHPGSPGNPGRGGQRSRGLPGPS 207
>AF067937-4|AAF99911.2| 352|Caenorhabditis elegans Hypothetical
protein F22F7.6 protein.
Length = 352
Score = 29.5 bits (63), Expect = 3.4
Identities = 17/58 (29%), Positives = 24/58 (41%)
Frame = +1
Query: 496 PSTPPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYQGYALAHAHPPVWDLAG 669
PS M+ I A+ + V D +G+ HT IY +AH D+AG
Sbjct: 271 PSRIKVMHSLIYALCRAGYTFHVPSHVFDVHEGIKHTNTIYSKATIAHQEAYAMDIAG 328
>Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical
protein F02D10.1 protein.
Length = 316
Score = 28.7 bits (61), Expect = 5.9
Identities = 15/51 (29%), Positives = 22/51 (43%)
Frame = -1
Query: 312 GYLSCSGPRHPRRSLSGPYRPSRPWWRGRPTMDGKTARGASSPAKPALHMP 160
G C P P P +P P G P G + +GA++P +P+ P
Sbjct: 112 GCTGCCNPGPPGPG-GRPGKPGTPGKPGAPGNPGASGKGAAAPCEPSTPPP 161
>AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical
protein W03G1.5 protein.
Length = 471
Score = 28.3 bits (60), Expect = 7.8
Identities = 14/42 (33%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Frame = +2
Query: 230 PRHQGRDGRYGPERL--LRG*RGPEQERYPHSEVPHRARYHH 349
PR G GR+GP G GP + P R +HH
Sbjct: 376 PRGHGHGGRHGPPHCPGRHGHHGPPHHHHHDGRSPSRHGHHH 417
>AC199170-9|ABO33267.1| 388|Caenorhabditis elegans Hypothetical
protein T08D2.8 protein.
Length = 388
Score = 28.3 bits (60), Expect = 7.8
Identities = 17/35 (48%), Positives = 19/35 (54%)
Frame = +3
Query: 138 RL*STMAPACARPVSPATTRPAPSSRPSWVALATR 242
RL S +AP A P S A TR APS + VA R
Sbjct: 231 RLSSAVAPRRAPPASAAPTRRAPSPKAPVVAPTRR 265
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,702,895
Number of Sequences: 27780
Number of extensions: 383034
Number of successful extensions: 1628
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1369
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1614
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2255353870
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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