Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP15_F_E05
         (913 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z54281-5|CAA91047.1|  191|Caenorhabditis elegans Hypothetical pr...   206   2e-53
AC024831-7|AAY86310.1|  711|Caenorhabditis elegans Hypothetical ...    31   1.1  
AC006708-19|AAF60423.3|  588|Caenorhabditis elegans Mtm (myotubu...    31   1.5  
U80839-3|AAB37909.1|  344|Caenorhabditis elegans Serpentine rece...    29   3.5  
Z79757-8|CAB02128.2|  355|Caenorhabditis elegans Hypothetical pr...    28   8.1  
Z49128-4|CAA88954.1|  541|Caenorhabditis elegans Hypothetical pr...    28   8.1  
U41990-1|AAZ91352.1|  107|Caenorhabditis elegans Hypothetical pr...    28   8.1  

>Z54281-5|CAA91047.1|  191|Caenorhabditis elegans Hypothetical
           protein F46C5.8 protein.
          Length = 191

 Score =  206 bits (502), Expect = 2e-53
 Identities = 91/163 (55%), Positives = 120/163 (73%)
 Frame = +2

Query: 329 RKGILSQGWTRISQVYQSTLDRWTPHAKTRWVGSALVMAAFIIRIITKQGWYIVTYALGI 508
           R G+ S+ +  +   YQ  LDR TPH   RWV + + +  F  RII  QG+YIV YA+GI
Sbjct: 8   RPGVTSRFFHSLEVKYQYYLDRLTPHTAFRWVIALISLVFFASRIILLQGFYIVAYAVGI 67

Query: 509 YHLNLFIAFLTPKIDPAMDLDDDENGPALPTRASEEFRPFIRRLPEFKFWLSVTKSTLIA 688
           Y+LNLF+ FLTP IDPA++ +D+++GP LP++ ++EFRPF+RRLPEFKFW S  K+TLIA
Sbjct: 68  YYLNLFLLFLTPSIDPALEFEDEDDGPVLPSKTNDEFRPFMRRLPEFKFWHSFMKATLIA 127

Query: 689 FCCTFVDAFNIPVFWPILVMYFITLFCITMKRPIKHMIKYXYL 817
             CTF + F++PVFWPILVMYF  L  +T+KR I HMIKY Y+
Sbjct: 128 ITCTFFEFFDVPVFWPILVMYFFILTFLTLKRQIMHMIKYRYI 170


>AC024831-7|AAY86310.1|  711|Caenorhabditis elegans Hypothetical
           protein Y55F3C.9 protein.
          Length = 711

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
 Frame = +1

Query: 361 NIAGLSEYIRQMDPSRKDTVGWKCVGHGCIYYPHNY*TRMVYCH-ICVGYLPFKLVHC 531
           N     EY+ ++  +R   + W   G   I+YP  +  +M+  H +C+G++ F +VHC
Sbjct: 80  NFCAQREYVPRLIFNRISILIW---GSLWIFYPLIHSDKMLLIHSVCLGFIIFIVVHC 134


>AC006708-19|AAF60423.3|  588|Caenorhabditis elegans Mtm
           (myotubularin) family protein 1 protein.
          Length = 588

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
 Frame = +2

Query: 431 ALVMAAFIIRIITKQGWYIVTYALGIYHLNLFIAFLTPKIDPAMDLDDDENGP---ALPT 601
           A V AA   R++ K GW I +       L +  + L  ++D   D    E  P    +PT
Sbjct: 150 ASVHAAETPRLM-KDGWKIYSAEKEYERLGIPNSRLWKEVDINKDYKFSETYPRTFVIPT 208

Query: 602 RASEEFRPFIRRLPEFK 652
            + EE +PF+++L EF+
Sbjct: 209 VSWEEGKPFVKKLGEFR 225


>U80839-3|AAB37909.1|  344|Caenorhabditis elegans Serpentine
           receptor, class h protein72 protein.
          Length = 344

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
 Frame = +2

Query: 683 IAFCCTFVDAFNIPVFWPILVMYFITLFCITMKRP--IKHM 799
           +AFCC  +   ++P       M+F T +CI MK P  +KH+
Sbjct: 31  LAFCCQIIGFISLP-------MHFFTGYCILMKTPATMKHV 64


>Z79757-8|CAB02128.2|  355|Caenorhabditis elegans Hypothetical
           protein F55B12.7 protein.
          Length = 355

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 15/78 (19%), Positives = 32/78 (41%)
 Frame = +2

Query: 650 KFWLSVTKSTLIAFCCTFVDAFNIPVFWPILVMYFITLFCITMKRPIKHMIKYXYLAIYT 829
           K W+ +   +++  C   VD+ N    W +    +     +T+     + +    + ++ 
Sbjct: 264 KRWMIMFLQSVMQDCLHLVDSINATYLWKLSEELWFQCIFLTLSFITIYTLDGFVMLVFN 323

Query: 830 QQTKVXKCRSYSTSELTT 883
           Q  +   CRS S  E T+
Sbjct: 324 QDIQPKWCRSGSKGERTS 341


>Z49128-4|CAA88954.1|  541|Caenorhabditis elegans Hypothetical
           protein M03C11.4 protein.
          Length = 541

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +2

Query: 320 EITRKGILSQGWTRISQVYQSTLDRWTPH 406
           E T+   LSQ + R+ + YQ T+DR   H
Sbjct: 509 EETKFSTLSQNYDRLMEAYQKTIDRIEQH 537


>U41990-1|AAZ91352.1|  107|Caenorhabditis elegans Hypothetical
           protein F52B10.3 protein.
          Length = 107

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 13/42 (30%), Positives = 23/42 (54%)
 Frame = +2

Query: 737 ILVMYFITLFCITMKRPIKHMIKYXYLAIYTQQTKVXKCRSY 862
           + + +FIT  CIT++  IKH+ K+     Y +     K ++Y
Sbjct: 9   VCIGFFIT--CITVRALIKHLNKFVLKVFYEEVVDFVKIQTY 48


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,083,718
Number of Sequences: 27780
Number of extensions: 434618
Number of successful extensions: 1182
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1121
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1181
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2328783996
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)