Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP15_F_E04
(1228 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 40 7e-04
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 38 0.003
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 36 0.009
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 36 0.011
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 35 0.020
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 35 0.020
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 31 0.33
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 31 0.43
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 31 0.43
SPBC660.05 |||conserved fungal protein|Schizosaccharomyces pombe... 29 1.7
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 28 2.3
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 27 7.0
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 39.9 bits (89), Expect = 7e-04
Identities = 25/60 (41%), Positives = 25/60 (41%), Gaps = 3/60 (5%)
Frame = -1
Query: 685 GGEXGGXGGX---RGGXGGRXGXAXXGGDGXXRXRGXXXTGGVXGXXXXPXXAPGGLXGG 515
GG GG GG RGG GG G A GG G R G GG G GG GG
Sbjct: 12 GGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARG-GRGGRGGARGGRGGSSGGRGGAKGG 70
Score = 34.3 bits (75), Expect = 0.035
Identities = 19/44 (43%), Positives = 20/44 (45%)
Frame = -1
Query: 703 WGXXXXGGEXGGXGGXRGGXGGRXGXAXXGGDGXXRXRGXXXTG 572
+G G GG GG RGG GGR G A G G RG G
Sbjct: 28 FGGGRGGARGGGRGGARGGRGGR-GGARGGRGGSSGGRGGAKGG 70
Score = 33.1 bits (72), Expect = 0.081
Identities = 21/57 (36%), Positives = 21/57 (36%)
Frame = -1
Query: 685 GGEXGGXGGXRGGXGGRXGXAXXGGDGXXRXRGXXXTGGVXGXXXXPXXAPGGLXGG 515
GG G GG G GGR G GG G R G G G GG GG
Sbjct: 9 GGRGGSRGGRGGFNGGRGGFG--GGRGGARGGGRGGARGGRGGRGGARGGRGGSSGG 63
Score = 27.5 bits (58), Expect = 4.0
Identities = 18/45 (40%), Positives = 20/45 (44%)
Frame = -1
Query: 1228 GGXGRKRGAXGXG*SWGGRRXAGXGVXXXWGRAGWWXGXXGGAXV 1094
GG G RG G G + GGR G G +G G GGA V
Sbjct: 30 GGRGGARGG-GRGGARGGRGGRGGARGGRGGSSGGRGGAKGGAKV 73
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 37.9 bits (84), Expect = 0.003
Identities = 33/146 (22%), Positives = 40/146 (27%), Gaps = 1/146 (0%)
Frame = +3
Query: 267 TTAPXXKXPMSTPPXPXTAXXXPHXPXXEAPRTPTPXTXHXHXXVTXTXSTXXXXXXXXX 446
+TAP P STPP P ++ P P P P P +
Sbjct: 1038 STAPPVPIPTSTPPVPKSSSGAPSAP----PPVPAPSSEIPSIPAPSGAPPVPAPSGIPP 1093
Query: 447 RXKKXXGXRXXPXPXXHSHXXXPPPXXPPGAXXGXXXXPXTPPVXXXPLXR-XXPSPPXX 623
K P P P PP P P P+ + +PP
Sbjct: 1094 VPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVP 1153
Query: 624 AXPXRPPXPPRXPPXPPXSPPXXXXP 701
A PP P PP P P
Sbjct: 1154 APSGAPPVPKPSVAAPPVPAPSSGIP 1179
Score = 29.9 bits (64), Expect = 0.75
Identities = 30/143 (20%), Positives = 34/143 (23%), Gaps = 1/143 (0%)
Frame = +3
Query: 276 PXXKXPMSTPPXPXTAXXXPHXPXXE-APRTPTPXTXHXHXXVTXTXSTXXXXXXXXXRX 452
P K ++ PP P + P P AP P P V
Sbjct: 1093 PVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPV 1152
Query: 453 KKXXGXRXXPXPXXHSHXXXPPPXXPPGAXXGXXXXPXTPPVXXXPLXRXXPSPPXXAXP 632
G P P + P P P PP P P P P
Sbjct: 1153 PAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAP---PVPKPSVGVPP 1209
Query: 633 XRPPXPPRXPPXPPXSPPXXXXP 701
PP P P P P
Sbjct: 1210 VPPPSTAPPVPTPSAGLPPVPVP 1232
Score = 29.9 bits (64), Expect = 0.75
Identities = 31/146 (21%), Positives = 34/146 (23%), Gaps = 4/146 (2%)
Frame = +3
Query: 276 PXXKXPMSTPPXPXTAXXXPHXPXXE-APRTPTPXTXHXHXXV-TXTXSTXXXXXXXXXR 449
P P PP P + P P AP P P +
Sbjct: 1112 PPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPV 1171
Query: 450 XKKXXGXRXXPXPXXHSHXXXPPPXXPPGAXXGXXXXPXTPPVXXXPLXRXXPSPPXXAX 629
G P P PP PP P PP P+ P
Sbjct: 1172 PAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPV 1231
Query: 630 P--XRPPXPPRXPPXPPXSPPXXXXP 701
P PP P P S P P
Sbjct: 1232 PTAKAPPVPAPSSEAPSVSTPRSSVP 1257
Score = 27.9 bits (59), Expect = 3.0
Identities = 19/75 (25%), Positives = 22/75 (29%)
Frame = +3
Query: 480 PXPXXHSHXXXPPPXXPPGAXXGXXXXPXTPPVXXXPLXRXXPSPPXXAXPXRPPXPPRX 659
P P + P P P P PP P PS P + P P
Sbjct: 1033 PIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAP-SSEIPSIPAPSGAPPVPAPSGI 1091
Query: 660 PPXPPXSPPXXXXPQ 704
PP P S P+
Sbjct: 1092 PPVPKPSVAAPPVPK 1106
Score = 26.2 bits (55), Expect = 9.3
Identities = 31/148 (20%), Positives = 38/148 (25%)
Frame = +3
Query: 258 GSETTAPXXKXPMSTPPXPXTAXXXPHXPXXEAPRTPTPXTXHXHXXVTXTXSTXXXXXX 437
G + + P P S PP P P E P+ P ++ ST
Sbjct: 955 GRKASGPRPAAPPSIPP-PLPVSNILSSPTSEPPKDHPPSAP-----LSKPVSTSPAAPL 1008
Query: 438 XXXRXKKXXGXRXXPXPXXHSHXXXPPPXXPPGAXXGXXXXPXTPPVXXXPLXRXXPSPP 617
+ P P + PP P TPPV PP
Sbjct: 1009 ARVPPVPKLSSKAPPVPLPSADA---PPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPP 1065
Query: 618 XXAXPXRPPXPPRXPPXPPXSPPXXXXP 701
A P P PP P P
Sbjct: 1066 VPAPSSEIPSIPAPSGAPPVPAPSGIPP 1093
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 36.3 bits (80), Expect = 0.009
Identities = 23/75 (30%), Positives = 24/75 (32%), Gaps = 1/75 (1%)
Frame = +3
Query: 480 PXPXXHSHXXXPPPXXPPGAXXG-XXXXPXTPPVXXXPLXRXXPSPPXXAXPXRPPXPPR 656
P P S PP PP A P PP+ P P P PP PP
Sbjct: 416 PVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPL---PPSAPIAPPLPAGMPAAPPLPPA 472
Query: 657 XPPXPPXSPPXXXXP 701
P PP P P
Sbjct: 473 APAPPPAPAPAPAAP 487
Score = 34.3 bits (75), Expect = 0.035
Identities = 25/79 (31%), Positives = 26/79 (32%), Gaps = 11/79 (13%)
Frame = +3
Query: 480 PXPXXHSHXXXPPPXXPPGAXX---------GXXXXPXTPPVXXXPLX--RXXPSPPXXA 626
P P S PP PP G TPPV P PS P A
Sbjct: 376 PPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSA 435
Query: 627 XPXRPPXPPRXPPXPPXSP 683
P P P PP PP +P
Sbjct: 436 PPSLPMGAPAAPPLPPSAP 454
Score = 29.5 bits (63), Expect = 1.00
Identities = 22/79 (27%), Positives = 24/79 (30%)
Frame = +1
Query: 466 GNARXXHPXXTPTNXXPPPXXPPAXXXDXPXXPPXPPXXSXXXXXXXXXXXXXXLXSAXX 645
GNA PT PP PP+ P PP P + A
Sbjct: 407 GNASRTSTPPVPTPPSLPPSAPPSLP---PSAPPSLPMGAPAAPPLPPSAPIAPPLPAGM 463
Query: 646 PPPGXPPXPPXXPXXPQXP 702
P PP PP P P P
Sbjct: 464 P--AAPPLPPAAPAPPPAP 480
Score = 28.3 bits (60), Expect = 2.3
Identities = 20/76 (26%), Positives = 22/76 (28%), Gaps = 2/76 (2%)
Frame = +3
Query: 480 PXPXXHSHXXXPPPXXPP--GAXXGXXXXPXTPPVXXXPLXRXXPSPPXXAXPXRPPXPP 653
P S+ PPP PP A P P R PS P
Sbjct: 326 PIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAV 385
Query: 654 RXPPXPPXSPPXXXXP 701
PP PP + P P
Sbjct: 386 SNPPAPPPAIPGRSAP 401
Score = 26.2 bits (55), Expect = 9.3
Identities = 17/50 (34%), Positives = 18/50 (36%), Gaps = 3/50 (6%)
Frame = +3
Query: 561 PXTPPVXXXPLXRXXPSPPXXAXPXRPPXPPRXP---PXPPXSPPXXXXP 701
P PP P R P + P PP PP PP SPP P
Sbjct: 230 PPIPP--SIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAP 277
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 35.9 bits (79), Expect = 0.011
Identities = 18/59 (30%), Positives = 22/59 (37%), Gaps = 1/59 (1%)
Frame = +3
Query: 513 PPPXXPPGAXXGXXXXPX-TPPVXXXPLXRXXPSPPXXAXPXRPPXPPRXPPXPPXSPP 686
P P PP + P PP+ P+ P + P P P PP PP PP
Sbjct: 145 PRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPP 203
Score = 34.3 bits (75), Expect = 0.035
Identities = 21/77 (27%), Positives = 24/77 (31%), Gaps = 3/77 (3%)
Frame = +3
Query: 480 PXPXXHSHXXXPPPXXPPGAXXGXXXXPXTPPVXXX--PLXRXXPSPPXXAXPXR-PPXP 650
P P PP PP PP+ P+ P P A P + PP
Sbjct: 128 PAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSA 187
Query: 651 PRXPPXPPXSPPXXXXP 701
P P P PP P
Sbjct: 188 PSLPSAVPPMPPKVPPP 204
Score = 33.1 bits (72), Expect = 0.081
Identities = 20/66 (30%), Positives = 21/66 (31%), Gaps = 1/66 (1%)
Frame = +1
Query: 499 PTNXXPPPXXPPAXXXDXPXXPPX-PPXXSXXXXXXXXXXXXXXLXSAXXPPPGXPPXPP 675
PT+ P P PP P P PP S SA P PP PP
Sbjct: 140 PTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPP 199
Query: 676 XXPXXP 693
P P
Sbjct: 200 KVPPPP 205
Score = 29.1 bits (62), Expect = 1.3
Identities = 20/61 (32%), Positives = 22/61 (36%), Gaps = 4/61 (6%)
Frame = +3
Query: 516 PPXXPPGAXXGXXXXPXTPPVXXXPLXRXXP--SPPXX-AXPXR-PPXPPRXPPXPPXSP 683
PP P A P P P P SPP + P PP PP+ PP P
Sbjct: 150 PPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPPLSQA 209
Query: 684 P 686
P
Sbjct: 210 P 210
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 35.1 bits (77), Expect = 0.020
Identities = 16/43 (37%), Positives = 20/43 (46%)
Frame = +3
Query: 573 PVXXXPLXRXXPSPPXXAXPXRPPXPPRXPPXPPXSPPXXXXP 701
PV P+ +PP + P PP P PP PP +PP P
Sbjct: 1686 PVSTPPVRPQSAAPPQMSAPTPPPPPMSVPP-PPSAPPMPAGP 1727
Score = 32.3 bits (70), Expect = 0.14
Identities = 22/68 (32%), Positives = 25/68 (36%)
Frame = +3
Query: 498 SHXXXPPPXXPPGAXXGXXXXPXTPPVXXXPLXRXXPSPPXXAXPXRPPXPPRXPPXPPX 677
+H PP P A P TPP + +PP A P P PP PP P
Sbjct: 1684 AHPVSTPPVRPQSAAPPQMSAP-TPPPPPMSVPPPPSAPPMPAGP--PSAPP--PPLPAS 1738
Query: 678 SPPXXXXP 701
S P P
Sbjct: 1739 SAPSVPNP 1746
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 35.1 bits (77), Expect = 0.020
Identities = 16/29 (55%), Positives = 16/29 (55%)
Frame = -1
Query: 673 GGXGGXRGGXGGRXGXAXXGGDGXXRXRG 587
GG G RGG GGR G GG G R RG
Sbjct: 447 GGSRGGRGGFGGRGGFGGRGGFGGGRGRG 475
Score = 31.5 bits (68), Expect = 0.25
Identities = 19/40 (47%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Frame = -1
Query: 685 GGEXGGXGGX--RGGXGGRXGXAXXGGDGXXRXRGXXXTG 572
GG GG GG RGG GGR G G G R RG +G
Sbjct: 447 GGSRGGRGGFGGRGGFGGRGGF----GGGRGRGRGGARSG 482
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 31.1 bits (67), Expect = 0.33
Identities = 20/70 (28%), Positives = 20/70 (28%), Gaps = 1/70 (1%)
Frame = +3
Query: 480 PXPXXHSHXXXPPPXXPPGAXXGXXXXPXTPPVXXXPLXRXXPS-PPXXAXPXRPPXPPR 656
P S PPP PP A P P PP P P
Sbjct: 179 PATSLPSDYNPPPPPPPPPAVEDQAADANEPDDYYSSGRAVSPEIPPTYTPKQADPLPAP 238
Query: 657 XPPXPPXSPP 686
PP PP PP
Sbjct: 239 PPPPPPTLPP 248
Score = 28.3 bits (60), Expect = 2.3
Identities = 20/68 (29%), Positives = 21/68 (30%), Gaps = 2/68 (2%)
Frame = +1
Query: 487 PXXTPTNXXPPPXXPPAXXXDXPXXPPXPPXXSXXXXXXXXXXXXXXLXSAXX--PPPGX 660
P TP P P PP P P PP + L S PPP
Sbjct: 225 PTYTPKQADPLPAPPP------PPPPTLPPQSTNTSQLPMPSRNVNNLGSQVNIPPPPAT 278
Query: 661 PPXPPXXP 684
P PP P
Sbjct: 279 PSQPPRPP 286
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 30.7 bits (66), Expect = 0.43
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = -1
Query: 700 GXXXXGGEXGGXGGXRGGXGGRXGXAXXGG 611
G GG GG GG RGG GG GG
Sbjct: 136 GRGGRGGFRGGRGGSRGGFGGNSRGGFGGG 165
Score = 26.2 bits (55), Expect = 9.3
Identities = 17/43 (39%), Positives = 17/43 (39%), Gaps = 1/43 (2%)
Frame = -1
Query: 685 GGEXGGXGGX-RGGXGGRXGXAXXGGDGXXRXRGXXXTGGVXG 560
GG GG GG RGG GG GG RG G G
Sbjct: 148 GGSRGGFGGNSRGGFGG-GSRGGFGGGSRGGSRGGFRGGSRGG 189
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 30.7 bits (66), Expect = 0.43
Identities = 18/51 (35%), Positives = 18/51 (35%), Gaps = 9/51 (17%)
Frame = +3
Query: 561 PXTPPVXXXPLXRXXPSP-----PXXAXPXRPPXPP----RXPPXPPXSPP 686
P PP P P P P P PP PP PP PP PP
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 29.5 bits (63), Expect = 1.00
Identities = 18/54 (33%), Positives = 18/54 (33%)
Frame = +3
Query: 513 PPPXXPPGAXXGXXXXPXTPPVXXXPLXRXXPSPPXXAXPXRPPXPPRXPPXPP 674
PPP PP A P PV P PP PP PP PP
Sbjct: 732 PPP--PPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 27.9 bits (59), Expect = 3.0
Identities = 15/55 (27%), Positives = 16/55 (29%)
Frame = +3
Query: 516 PPXXPPGAXXGXXXXPXTPPVXXXPLXRXXPSPPXXAXPXRPPXPPRXPPXPPXS 680
PP PP P P+ P PP PP PP P S
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVS 786
Score = 27.1 bits (57), Expect = 5.3
Identities = 11/30 (36%), Positives = 11/30 (36%)
Frame = +1
Query: 487 PXXTPTNXXPPPXXPPAXXXDXPXXPPXPP 576
P P PPP PP PP PP
Sbjct: 752 PPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
>SPBC660.05 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 143
Score = 28.7 bits (61), Expect = 1.7
Identities = 14/36 (38%), Positives = 15/36 (41%)
Frame = -1
Query: 703 WGXXXXGGEXGGXGGXRGGXGGRXGXAXXGGDGXXR 596
+G GG G G GG GGR G G G R
Sbjct: 107 FGPRIGGGHHGPLHGPHGGFGGRGGGRMGGRGGRGR 142
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 28.3 bits (60), Expect = 2.3
Identities = 21/86 (24%), Positives = 23/86 (26%), Gaps = 4/86 (4%)
Frame = +2
Query: 554 PPXXHXPRXXXPPXPXXXVPTXRGXSXXXXXXXXXXXXXXRLXPXXXXXPGGXRXPPPP- 730
PP H P PP P P + P G PPPP
Sbjct: 210 PPMHHKPGEHMPPPPMHHEP-----GEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPM 264
Query: 731 ---PXXTRPXPXQAHPXTXXXPXPPL 799
P P P H P PP+
Sbjct: 265 HHEPGEHMPPPPMHHEPGEHMPPPPM 290
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 26.6 bits (56), Expect = 7.0
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = +1
Query: 499 PTNXXPPPXXPPAXXXDXPXXPPXPP 576
P PPP PP + P PP PP
Sbjct: 5 PPGNPPPPPPPPG--FEPPSQPPPPP 28
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,835,329
Number of Sequences: 5004
Number of extensions: 19047
Number of successful extensions: 303
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 62
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 188
length of database: 2,362,478
effective HSP length: 74
effective length of database: 1,992,182
effective search space used: 665388788
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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