Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP15_F_D24
(981 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC11C11.09c |rpl502|rpl5-2, rpl5b|60S ribosomal protein L5|Sch... 76 9e-15
SPAC3H5.12c |rpl501|rpl5-1, rpl5|60S ribosomal protein L5|Schizo... 76 9e-15
SPAC24C9.07c |bgs2|meu21, pgs2|1,3-beta-glucan synthase subunit ... 30 0.43
SPCC1840.02c |bgs4|orb11, cwg1|1,3-beta-glucan synthase subunit ... 30 0.57
SPBC19G7.05c |bgs1|cps1, drc1|1,3-beta-glucan synthase catalytic... 29 1.0
SPAC19B12.03 |bgs3||1,3-beta-glucan synthase subunit Bgs3|Schizo... 29 1.3
SPAC1B1.02c |||NAD/NADH kinase |Schizosaccharomyces pombe|chr 1|... 26 7.1
>SPBC11C11.09c |rpl502|rpl5-2, rpl5b|60S ribosomal protein
L5|Schizosaccharomyces pombe|chr 2|||Manual
Length = 294
Score = 75.8 bits (178), Expect = 9e-15
Identities = 34/64 (53%), Positives = 42/64 (65%)
Frame = +1
Query: 220 QDKNKYNTPKYRLXVRLSNKDVTCQVXYSRIEGDHIVCAAYSHXLPRYGVXVGLTXXXXX 399
Q KNKYN PKYRL VR SN+ VTCQ+ SR+ GD+++ A+S LPRYG+ GL
Sbjct: 39 QAKNKYNAPKYRLVVRFSNRFVTCQIVSSRVNGDYVLAHAHSSELPRYGIKWGLANWTAA 98
Query: 400 XXTG 411
TG
Sbjct: 99 YATG 102
Score = 62.9 bits (146), Expect = 7e-11
Identities = 26/43 (60%), Positives = 32/43 (74%)
Frame = +3
Query: 105 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLXCSGQEQ 233
M F+K VK+ YF RYQ K++RRREGKTDYYARKRL + +
Sbjct: 1 MPFIKAVKSSPYFSRYQTKYRRRREGKTDYYARKRLIAQAKNK 43
>SPAC3H5.12c |rpl501|rpl5-1, rpl5|60S ribosomal protein
L5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 294
Score = 75.8 bits (178), Expect = 9e-15
Identities = 34/64 (53%), Positives = 42/64 (65%)
Frame = +1
Query: 220 QDKNKYNTPKYRLXVRLSNKDVTCQVXYSRIEGDHIVCAAYSHXLPRYGVXVGLTXXXXX 399
Q KNKYN PKYRL VR SN+ VTCQ+ SR+ GD+++ A+S LPRYG+ GL
Sbjct: 39 QAKNKYNAPKYRLVVRFSNRFVTCQIVSSRVNGDYVLAHAHSSELPRYGIKWGLANWTAA 98
Query: 400 XXTG 411
TG
Sbjct: 99 YATG 102
Score = 62.9 bits (146), Expect = 7e-11
Identities = 26/43 (60%), Positives = 32/43 (74%)
Frame = +3
Query: 105 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLXCSGQEQ 233
M F+K VK+ YF RYQ K++RRREGKTDYYARKRL + +
Sbjct: 1 MPFIKAVKSSPYFSRYQTKYRRRREGKTDYYARKRLIAQAKNK 43
>SPAC24C9.07c |bgs2|meu21, pgs2|1,3-beta-glucan synthase subunit
Bgs2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1894
Score = 30.3 bits (65), Expect = 0.43
Identities = 27/99 (27%), Positives = 41/99 (41%), Gaps = 3/99 (3%)
Frame = +1
Query: 40 DLPFFLLGVPSVDATL*LRFKIWDSLKL*RTNNTSRGTK*NSRGVVKGKLIIMLVNASXV 219
DLPF+ +G + LR +IW SL+ T G SR + KL+ + N
Sbjct: 959 DLPFYCIGFKNATPEYTLRTRIWASLRSQTLYRTVSGFMNYSRAI---KLLYRVENPDVA 1015
Query: 220 Q-DKNKYNTPKYRLXVRLSNKDVTC--QVXYSRIEGDHI 327
Q + + + +Y L S K C Y++ D I
Sbjct: 1016 QLFEGQMDVLEYELDRMASRKFKMCVSMQRYAKFTADEI 1054
>SPCC1840.02c |bgs4|orb11, cwg1|1,3-beta-glucan synthase subunit
Bgs4|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1955
Score = 29.9 bits (64), Expect = 0.57
Identities = 21/61 (34%), Positives = 28/61 (45%)
Frame = +1
Query: 40 DLPFFLLGVPSVDATL*LRFKIWDSLKL*RTNNTSRGTK*NSRGVVKGKLIIMLVNASXV 219
DLPF+ +G S LR +IW SL+ T G SR + KL+ + N V
Sbjct: 983 DLPFYCIGFKSAMPEYTLRTRIWASLRSQTLYRTISGFMNYSRAI---KLLYRVENPEIV 1039
Query: 220 Q 222
Q
Sbjct: 1040 Q 1040
>SPBC19G7.05c |bgs1|cps1, drc1|1,3-beta-glucan synthase catalytic
subunit Bgs1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1729
Score = 29.1 bits (62), Expect = 1.0
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = +1
Query: 40 DLPFFLLGVPSVDATL*LRFKIWDSLKL*RTNNTSRGTK*NSRGV 174
DLPF+ +G S LR +IW SL+ T G SR +
Sbjct: 801 DLPFYCVGFKSATPEYTLRTRIWASLRTQTLYRTINGFSNYSRAI 845
>SPAC19B12.03 |bgs3||1,3-beta-glucan synthase subunit
Bgs3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1826
Score = 28.7 bits (61), Expect = 1.3
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = +1
Query: 40 DLPFFLLGVPSVDATL*LRFKIWDSLKL*RTNNTSRGTK*NSRGV 174
DLPF+ +G S LR +IW SL+ T+ G SR +
Sbjct: 897 DLPFYCIGFKSTAPEYTLRTRIWASLRSQTLYRTASGMMNYSRAL 941
>SPAC1B1.02c |||NAD/NADH kinase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 537
Score = 26.2 bits (55), Expect = 7.1
Identities = 10/35 (28%), Positives = 18/35 (51%)
Frame = -3
Query: 409 QWXMXQHNXSDQXSHHNVAXHVNKQRTQYGHLQSE 305
QW + + + SH+N+A + TQ ++SE
Sbjct: 184 QWLLDTFSFTPSSSHNNMASSNTQSNTQLSEMESE 218
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,356,214
Number of Sequences: 5004
Number of extensions: 38588
Number of successful extensions: 82
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 79
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 82
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 505288058
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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