Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP15_F_D24
         (981 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_1660 + 38966999-38967001,38967685-38967757,38967841-389679...    80   2e-15
01_06_1659 + 38961637-38961639,38962361-38962433,38962531-389626...    80   2e-15

>01_06_1660 +
           38966999-38967001,38967685-38967757,38967841-38967923,
           38968042-38968168,38968260-38968339,38968428-38968544,
           38968711-38968845,38969046-38969215,38969300-38969417
          Length = 301

 Score = 80.2 bits (189), Expect = 2e-15
 Identities = 37/64 (57%), Positives = 45/64 (70%)
 Frame = +1

Query: 220 QDKNKYNTPKYRLXVRLSNKDVTCQVXYSRIEGDHIVCAAYSHXLPRYGVXVGLTXXXXX 399
           QDKNKYNTPKYR    ++NKD+T Q+ Y+ I GD ++ AAYSH LPRYG+ VGLT     
Sbjct: 40  QDKNKYNTPKYRF---VTNKDITAQIVYATIAGDIVMAAAYSHELPRYGLEVGLTNYAAA 96

Query: 400 XXTG 411
             TG
Sbjct: 97  YCTG 100



 Score = 54.8 bits (126), Expect = 1e-07
 Identities = 25/35 (71%), Positives = 27/35 (77%)
 Frame = +3

Query: 108 GFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 212
           GFVK  K   Y KR+QVKFKRRR+GKTDY AR RL
Sbjct: 3   GFVKTQKTNAYHKRFQVKFKRRRQGKTDYRARIRL 37


>01_06_1659 +
           38961637-38961639,38962361-38962433,38962531-38962613,
           38962732-38962858,38962950-38963029,38963112-38963228,
           38963393-38963527,38963714-38963883,38963970-38964087
          Length = 301

 Score = 80.2 bits (189), Expect = 2e-15
 Identities = 37/64 (57%), Positives = 45/64 (70%)
 Frame = +1

Query: 220 QDKNKYNTPKYRLXVRLSNKDVTCQVXYSRIEGDHIVCAAYSHXLPRYGVXVGLTXXXXX 399
           QDKNKYNTPKYR    ++NKD+T Q+ Y+ I GD ++ AAYSH LPRYG+ VGLT     
Sbjct: 40  QDKNKYNTPKYRF---VTNKDITAQIVYATIAGDIVMAAAYSHELPRYGLEVGLTNYAAA 96

Query: 400 XXTG 411
             TG
Sbjct: 97  YCTG 100



 Score = 57.2 bits (132), Expect = 2e-08
 Identities = 26/35 (74%), Positives = 28/35 (80%)
 Frame = +3

Query: 108 GFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 212
           GFVK  K   YFKR+QVKFKRRR+GKTDY AR RL
Sbjct: 3   GFVKTQKTHAYFKRFQVKFKRRRQGKTDYRARIRL 37


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,001,346
Number of Sequences: 37544
Number of extensions: 278593
Number of successful extensions: 536
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 485
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 529
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2858396560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)