Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP15_F_D24
(981 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC132972-1|AAI32973.1| 297|Homo sapiens ribosomal protein L5 pr... 101 5e-21
BC132970-1|AAI32971.1| 297|Homo sapiens ribosomal protein L5 pr... 101 5e-21
BC109370-1|AAI09371.1| 297|Homo sapiens ribosomal protein L5 pr... 101 5e-21
AL162740-1|CAI22505.1| 297|Homo sapiens ribosomal protein L5 pr... 101 5e-21
AK222604-1|BAD96324.1| 297|Homo sapiens ribosomal protein L5 va... 101 5e-21
AB208980-1|BAD92217.1| 303|Homo sapiens ribosomal protein L5 va... 101 5e-21
U14966-1|AAA85654.1| 297|Homo sapiens ribosomal protein L5 prot... 99 2e-20
BC001882-1|AAH01882.1| 101|Homo sapiens RPL5 protein protein. 99 2e-20
AL162740-2|CAI22506.1| 126|Homo sapiens ribosomal protein L5 pr... 72 3e-12
D88460-1|BAA20128.1| 505|Homo sapiens N-WASP protein. 31 4.9
>BC132972-1|AAI32973.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 101 bits (241), Expect = 5e-21
Identities = 44/82 (53%), Positives = 55/82 (67%)
Frame = +1
Query: 217 VQDKNKYNTPKYRLXVRLSNKDVTCQVXYSRIEGDHIVCAAYSHXLPRYGVXVGLTXXXX 396
+QDKNKYNTPKYR+ VR++N+D+ CQ+ Y+RIEGD IVCAAY+H LP+YGV VGLT
Sbjct: 38 IQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAA 97
Query: 397 XXXTGXXXXXXXXXXXXXDTLY 462
TG D +Y
Sbjct: 98 AYCTGLLLARRLLNRFGMDKIY 119
Score = 76.6 bits (180), Expect = 1e-13
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +3
Query: 105 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 212
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRL
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRL 36
>BC132970-1|AAI32971.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 101 bits (241), Expect = 5e-21
Identities = 44/82 (53%), Positives = 55/82 (67%)
Frame = +1
Query: 217 VQDKNKYNTPKYRLXVRLSNKDVTCQVXYSRIEGDHIVCAAYSHXLPRYGVXVGLTXXXX 396
+QDKNKYNTPKYR+ VR++N+D+ CQ+ Y+RIEGD IVCAAY+H LP+YGV VGLT
Sbjct: 38 IQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAA 97
Query: 397 XXXTGXXXXXXXXXXXXXDTLY 462
TG D +Y
Sbjct: 98 AYCTGLLLARRLLNRFGMDKIY 119
Score = 76.6 bits (180), Expect = 1e-13
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +3
Query: 105 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 212
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRL
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRL 36
>BC109370-1|AAI09371.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 101 bits (241), Expect = 5e-21
Identities = 44/82 (53%), Positives = 55/82 (67%)
Frame = +1
Query: 217 VQDKNKYNTPKYRLXVRLSNKDVTCQVXYSRIEGDHIVCAAYSHXLPRYGVXVGLTXXXX 396
+QDKNKYNTPKYR+ VR++N+D+ CQ+ Y+RIEGD IVCAAY+H LP+YGV VGLT
Sbjct: 38 IQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAA 97
Query: 397 XXXTGXXXXXXXXXXXXXDTLY 462
TG D +Y
Sbjct: 98 AYCTGLLLARRLLNRFGMDKIY 119
Score = 76.6 bits (180), Expect = 1e-13
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +3
Query: 105 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 212
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRL
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRL 36
>AL162740-1|CAI22505.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 101 bits (241), Expect = 5e-21
Identities = 44/82 (53%), Positives = 55/82 (67%)
Frame = +1
Query: 217 VQDKNKYNTPKYRLXVRLSNKDVTCQVXYSRIEGDHIVCAAYSHXLPRYGVXVGLTXXXX 396
+QDKNKYNTPKYR+ VR++N+D+ CQ+ Y+RIEGD IVCAAY+H LP+YGV VGLT
Sbjct: 38 IQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAA 97
Query: 397 XXXTGXXXXXXXXXXXXXDTLY 462
TG D +Y
Sbjct: 98 AYCTGLLLARRLLNRFGMDKIY 119
Score = 76.6 bits (180), Expect = 1e-13
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +3
Query: 105 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 212
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRL
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRL 36
>AK222604-1|BAD96324.1| 297|Homo sapiens ribosomal protein L5
variant protein.
Length = 297
Score = 101 bits (241), Expect = 5e-21
Identities = 44/82 (53%), Positives = 55/82 (67%)
Frame = +1
Query: 217 VQDKNKYNTPKYRLXVRLSNKDVTCQVXYSRIEGDHIVCAAYSHXLPRYGVXVGLTXXXX 396
+QDKNKYNTPKYR+ VR++N+D+ CQ+ Y+RIEGD IVCAAY+H LP+YGV VGLT
Sbjct: 38 IQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAA 97
Query: 397 XXXTGXXXXXXXXXXXXXDTLY 462
TG D +Y
Sbjct: 98 AYCTGLLLARRLLNRFGMDKIY 119
Score = 76.6 bits (180), Expect = 1e-13
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +3
Query: 105 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 212
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRL
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRL 36
>AB208980-1|BAD92217.1| 303|Homo sapiens ribosomal protein L5
variant protein.
Length = 303
Score = 101 bits (241), Expect = 5e-21
Identities = 44/82 (53%), Positives = 55/82 (67%)
Frame = +1
Query: 217 VQDKNKYNTPKYRLXVRLSNKDVTCQVXYSRIEGDHIVCAAYSHXLPRYGVXVGLTXXXX 396
+QDKNKYNTPKYR+ VR++N+D+ CQ+ Y+RIEGD IVCAAY+H LP+YGV VGLT
Sbjct: 45 IQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAA 104
Query: 397 XXXTGXXXXXXXXXXXXXDTLY 462
TG D +Y
Sbjct: 105 AYCTGLLLARRLLNRFGMDKIY 126
Score = 76.6 bits (180), Expect = 1e-13
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +3
Query: 105 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 212
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRL
Sbjct: 8 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRL 43
>U14966-1|AAA85654.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 99.1 bits (236), Expect = 2e-20
Identities = 43/82 (52%), Positives = 54/82 (65%)
Frame = +1
Query: 217 VQDKNKYNTPKYRLXVRLSNKDVTCQVXYSRIEGDHIVCAAYSHXLPRYGVXVGLTXXXX 396
+QDKNKYNTPKYR+ VR++N+D+ CQ+ Y+RIEGD IVCA Y+H LP+YGV VGLT
Sbjct: 38 IQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCARYAHELPKYGVKVGLTNYAA 97
Query: 397 XXXTGXXXXXXXXXXXXXDTLY 462
TG D +Y
Sbjct: 98 AYCTGLLLARRLLNRFGMDKIY 119
Score = 76.6 bits (180), Expect = 1e-13
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +3
Query: 105 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 212
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRL
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRL 36
>BC001882-1|AAH01882.1| 101|Homo sapiens RPL5 protein protein.
Length = 101
Score = 99.1 bits (236), Expect = 2e-20
Identities = 40/56 (71%), Positives = 50/56 (89%)
Frame = +1
Query: 217 VQDKNKYNTPKYRLXVRLSNKDVTCQVXYSRIEGDHIVCAAYSHXLPRYGVXVGLT 384
+QDKNKYNTPKYR+ VR++N+D+ CQ+ Y+RIEGD IVCAAY+H LP+YGV VGLT
Sbjct: 38 IQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLT 93
Score = 76.6 bits (180), Expect = 1e-13
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +3
Query: 105 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 212
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRL
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRL 36
>AL162740-2|CAI22506.1| 126|Homo sapiens ribosomal protein L5
protein.
Length = 126
Score = 72.1 bits (169), Expect = 3e-12
Identities = 32/69 (46%), Positives = 42/69 (60%)
Frame = +1
Query: 256 LXVRLSNKDVTCQVXYSRIEGDHIVCAAYSHXLPRYGVXVGLTXXXXXXXTGXXXXXXXX 435
+ VR++N+D+ CQ+ Y+RIEGD IVCAAY+H LP+YGV VGLT TG
Sbjct: 1 MIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLL 60
Query: 436 XXXXXDTLY 462
D +Y
Sbjct: 61 NRFGMDKIY 69
>D88460-1|BAA20128.1| 505|Homo sapiens N-WASP protein.
Length = 505
Score = 31.5 bits (68), Expect = 4.9
Identities = 17/57 (29%), Positives = 20/57 (35%)
Frame = +2
Query: 728 PPPXCSTXXXQRLXPPPXXXFXXPXXLXPXXXXTTDLPXXPSSXXHSPXXPX*PPSP 898
PPP S + PPP + P P + P PS P P PP P
Sbjct: 323 PPPPPSRPSVEVPPPPPNRMYPPPPPALPSSAPSGPPPPPPSVLGVGPVAPPPPPPP 379
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,626,197
Number of Sequences: 237096
Number of extensions: 1560778
Number of successful extensions: 2553
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2346
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2522
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 13102819592
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -