Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP15_F_D24
         (981 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z49967-5|CAA90251.1|  293|Caenorhabditis elegans Hypothetical pr...    95   5e-20
Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical pr...    28   8.8  
Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical p...    28   8.8  

>Z49967-5|CAA90251.1|  293|Caenorhabditis elegans Hypothetical
           protein F54C9.5 protein.
          Length = 293

 Score = 95.5 bits (227), Expect = 5e-20
 Identities = 43/65 (66%), Positives = 50/65 (76%)
 Frame = +1

Query: 217 VQDKNKYNTPKYRLXVRLSNKDVTCQVXYSRIEGDHIVCAAYSHXLPRYGVXVGLTXXXX 396
           VQDKNKYNTPKYRL VR++NKDV  Q+ YS+IEGD +V +AYSH LPRYG+ VGLT    
Sbjct: 38  VQDKNKYNTPKYRLIVRITNKDVVAQLAYSKIEGDVVVASAYSHELPRYGLKVGLTNYAA 97

Query: 397 XXXTG 411
              TG
Sbjct: 98  AYATG 102



 Score = 71.3 bits (167), Expect = 1e-12
 Identities = 31/36 (86%), Positives = 33/36 (91%)
 Frame = +3

Query: 105 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 212
           MG VKV+KNK YFKRYQVK +RRREGKTDYYARKRL
Sbjct: 1   MGLVKVIKNKAYFKRYQVKLRRRREGKTDYYARKRL 36


>Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical protein
            F25H8.3 protein.
          Length = 2165

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
 Frame = -3

Query: 340  KQRTQYGHLQSESXPPGMLHLCWRDAXSDDI*VCYI-CS 227
            +QR     ++ +   P   HLC R++   DI  CYI CS
Sbjct: 980  RQRVSCVKMEGDRQTPASEHLCDRNSKPSDIASCYIDCS 1018


>Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical
            protein F25H8.3 protein.
          Length = 2165

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
 Frame = -3

Query: 340  KQRTQYGHLQSESXPPGMLHLCWRDAXSDDI*VCYI-CS 227
            +QR     ++ +   P   HLC R++   DI  CYI CS
Sbjct: 980  RQRVSCVKMEGDRQTPASEHLCDRNSKPSDIASCYIDCS 1018


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,622,179
Number of Sequences: 27780
Number of extensions: 229258
Number of successful extensions: 499
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 473
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 497
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2552786072
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)