Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP15_F_D23
(941 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 39 0.001
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 33 0.077
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 32 0.10
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 32 0.13
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 31 0.24
SPAPB1A10.08 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 30 0.41
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 30 0.41
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 29 0.72
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 29 0.72
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 29 0.95
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 29 1.3
SPAC22F8.11 |plc1||phosphoinositide phospholipase C Plc1|Schizos... 28 2.2
SPAC589.03c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 28 2.2
SPBC21D10.06c |map4||cell agglutination protein Map4|Schizosacch... 27 2.9
SPBC646.09c |int6|yin6|translation initiation factor eIF3e|Schiz... 27 2.9
SPBC30D10.07c |||biotin-protein ligase |Schizosaccharomyces pomb... 27 2.9
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 27 3.8
SPBC1A4.03c |top2|ptr11|DNA topoisomerase II|Schizosaccharomyces... 27 5.1
SPAC32A11.04c |tif212|tif22, SPAC6B12.17c|translation initiation... 26 6.7
SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78 |Schizosacch... 26 6.7
SPAC15A10.13 |ppk3||serine/threonine protein kinase Ppk3|Schizos... 26 8.8
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 26 8.8
SPAC18B11.02c |||pseudouridylate synthase |Schizosaccharomyces p... 26 8.8
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 38.7 bits (86), Expect = 0.001
Identities = 27/79 (34%), Positives = 28/79 (35%), Gaps = 3/79 (3%)
Frame = +3
Query: 687 LPXFTNXFFHLXPPPPXXPPXPP--PPXPPXXAGPXFPLXXXXXXPXXXXPPXAPXA-PX 857
LP N PP P P PP PP P A P P+ P PP AP A P
Sbjct: 403 LPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPP---LPPSAPIAPPL 459
Query: 858 PXXTXXXPXAXSXXXXPPP 914
P P PPP
Sbjct: 460 PAGMPAAPPLPPAAPAPPP 478
Score = 32.3 bits (70), Expect = 0.10
Identities = 20/66 (30%), Positives = 21/66 (31%), Gaps = 1/66 (1%)
Frame = +1
Query: 739 PXPPPXPPPPXXXXGPXFPSXXGXXXPXXXTPPXXXXP-PXXLPPXXPXXLPXXXXXPPP 915
P PPP P P + P TPP P LPP P LP PP
Sbjct: 389 PAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPP 448
Query: 916 XXXXPP 933
P
Sbjct: 449 LPPSAP 454
Score = 31.1 bits (67), Expect = 0.24
Identities = 19/67 (28%), Positives = 21/67 (31%)
Frame = +1
Query: 739 PXPPPXPPPPXXXXGPXFPSXXGXXXPXXXTPPXXXXPPXXLPPXXPXXLPXXXXXPPPX 918
P PP PP P P P PP P + P P +P PP
Sbjct: 418 PTPPSLPPSAPPSLPPSAPPSLPMGAPA--APPLPPSAP--IAPPLPAGMPAAPPLPPAA 473
Query: 919 XXXPPXP 939
PP P
Sbjct: 474 PAPPPAP 480
Score = 29.5 bits (63), Expect = 0.72
Identities = 14/30 (46%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
Frame = +2
Query: 749 PPXPXPPXXRXAXXSPL-PXXXSPPPXXPP 835
PP P PP A PL P S PP PP
Sbjct: 337 PPPPPPPRSNAAGSIPLPPQGRSAPPPPPP 366
Score = 28.7 bits (61), Expect = 1.3
Identities = 18/65 (27%), Positives = 21/65 (32%), Gaps = 1/65 (1%)
Frame = +3
Query: 723 PPPPXXPPXPPPPXPPXXAGPXFPLXXXXXXPXXXXPPXAPXAP-XPXXTXXXPXAXSXX 899
P PP P PP P + P P PP +P P P + S
Sbjct: 231 PIPPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKP 290
Query: 900 XXPPP 914
PPP
Sbjct: 291 PLPPP 295
Score = 28.7 bits (61), Expect = 1.3
Identities = 14/46 (30%), Positives = 14/46 (30%)
Frame = +3
Query: 723 PPPPXXPPXPPPPXPPXXAGPXFPLXXXXXXPXXXXPPXAPXAPXP 860
P P P PP P P P P P P AP P
Sbjct: 437 PSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAP 482
Score = 27.9 bits (59), Expect = 2.2
Identities = 16/58 (27%), Positives = 18/58 (31%)
Frame = +3
Query: 741 PPXPPPPXPPXXAGPXFPLXXXXXXPXXXXPPXAPXAPXPXXTXXXPXAXSXXXXPPP 914
PP PPPP P P+ PP P + P S PPP
Sbjct: 311 PPPPPPPSRRNRGKP--PIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPP 366
Score = 27.5 bits (58), Expect = 2.9
Identities = 16/60 (26%), Positives = 17/60 (28%)
Frame = +2
Query: 749 PPXPXPPXXRXAXXSPLPXXXSPPPXXPPLRXXRPXXXXHXPXPXXXLXXXXXPPXXXXP 928
PP P PP R P+ S PP R P P PP P
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAP 370
Score = 26.2 bits (55), Expect = 6.7
Identities = 13/34 (38%), Positives = 15/34 (44%)
Frame = +2
Query: 749 PPXPXPPXXRXAXXSPLPXXXSPPPXXPPLRXXR 850
PP P PP R + + PPP PP R R
Sbjct: 290 PPLP-PPSSRVSAAALAANKKRPPPPPPPSRRNR 322
Score = 26.2 bits (55), Expect = 6.7
Identities = 14/43 (32%), Positives = 14/43 (32%)
Frame = +3
Query: 723 PPPPXXPPXPPPPXPPXXAGPXFPLXXXXXXPXXXXPPXAPXA 851
PP P P PP A P P P P AP A
Sbjct: 447 PPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAPAAPVA 489
Score = 25.8 bits (54), Expect = 8.8
Identities = 16/67 (23%), Positives = 16/67 (23%)
Frame = +1
Query: 739 PXPPPXPPPPXXXXGPXFPSXXGXXXPXXXTPPXXXXPPXXLPPXXPXXLPXXXXXPPPX 918
P PPP P P S P P LPP P P
Sbjct: 362 PPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPP 421
Query: 919 XXXPPXP 939
P P
Sbjct: 422 SLPPSAP 428
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 32.7 bits (71), Expect = 0.077
Identities = 17/51 (33%), Positives = 17/51 (33%), Gaps = 5/51 (9%)
Frame = +3
Query: 723 PPPPXXPPXPPP-----PXPPXXAGPXFPLXXXXXXPXXXXPPXAPXAPXP 860
PPP PP P P P PP P P P AP P P
Sbjct: 1192 PPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAP 1242
Score = 31.1 bits (67), Expect = 0.24
Identities = 18/69 (26%), Positives = 19/69 (27%), Gaps = 1/69 (1%)
Frame = +3
Query: 726 PPPXXPPXPPPPXPPXXAGPXFPLXXXXXXPXXXXPPXAPXAPXPXXTXXXP-XAXSXXX 902
PP P PP P A P P P P P P P +
Sbjct: 1150 PPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPP 1209
Query: 903 XPPPXXXXP 929
PPP P
Sbjct: 1210 VPPPSTAPP 1218
Score = 29.9 bits (64), Expect = 0.54
Identities = 20/67 (29%), Positives = 22/67 (32%), Gaps = 1/67 (1%)
Frame = +3
Query: 732 PXXPPXPPPPXPPXXA-GPXFPLXXXXXXPXXXXPPXAPXAPXPXXTXXXPXAXSXXXXP 908
P P PP P + P PL P P AP P P T P + S
Sbjct: 1004 PAAPLARVPPVPKLSSKAPPVPLPSADAPPIPV-PSTAPPVPIPTSTPPVPKSSSGAPSA 1062
Query: 909 PPXXXXP 929
PP P
Sbjct: 1063 PPPVPAP 1069
Score = 27.1 bits (57), Expect = 3.8
Identities = 15/45 (33%), Positives = 15/45 (33%)
Frame = +3
Query: 726 PPPXXPPXPPPPXPPXXAGPXFPLXXXXXXPXXXXPPXAPXAPXP 860
PP P PP P A P P P P AP P P
Sbjct: 1083 PPVPAPSGIPPVPKPSVAAPPVP-KPSVAVPPVPAPSGAPPVPKP 1126
Score = 26.6 bits (56), Expect = 5.1
Identities = 17/62 (27%), Positives = 19/62 (30%)
Frame = +3
Query: 726 PPPXXPPXPPPPXPPXXAGPXFPLXXXXXXPXXXXPPXAPXAPXPXXTXXXPXAXSXXXX 905
PP P PP P P P P P AP P P + P +
Sbjct: 1102 PPVPKPSVAVPPVPAPSGAPPVP-KPSVAAPPVPVPSGAPPVPKP--SVAAPPVPAPSGA 1158
Query: 906 PP 911
PP
Sbjct: 1159 PP 1160
Score = 26.2 bits (55), Expect = 6.7
Identities = 18/69 (26%), Positives = 21/69 (30%), Gaps = 1/69 (1%)
Frame = +3
Query: 726 PPPXXPPXPPPPXPPXXAGPXFPLXXXXXXPXXXXPPXAPXAPXPXXTXXXP-XAXSXXX 902
PP P PP P A P P+ P AP P P P + +
Sbjct: 1112 PPVPAPSGAPPVPKPSVAAPPVPV-PSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPP 1170
Query: 903 XPPPXXXXP 929
P P P
Sbjct: 1171 VPAPSSGIP 1179
Score = 26.2 bits (55), Expect = 6.7
Identities = 18/64 (28%), Positives = 20/64 (31%)
Frame = +3
Query: 723 PPPPXXPPXPPPPXPPXXAGPXFPLXXXXXXPXXXXPPXAPXAPXPXXTXXXPXAXSXXX 902
PP P PP PP A P P P PP + P P + P
Sbjct: 1179 PPVPKPAAGVPPVPPPSEA-PPVPKPSVGVPP---VPPPSTAPPVPTPSAGLPPVPVPTA 1234
Query: 903 XPPP 914
PP
Sbjct: 1235 KAPP 1238
Score = 25.8 bits (54), Expect = 8.8
Identities = 14/45 (31%), Positives = 15/45 (33%)
Frame = +3
Query: 726 PPPXXPPXPPPPXPPXXAGPXFPLXXXXXXPXXXXPPXAPXAPXP 860
PP P PP P P P+ P AP AP P
Sbjct: 1022 PPVPLPSADAPPIPVPSTAPPVPI-PTSTPPVPKSSSGAPSAPPP 1065
Score = 25.8 bits (54), Expect = 8.8
Identities = 19/64 (29%), Positives = 19/64 (29%)
Frame = +1
Query: 739 PXPPPXPPPPXXXXGPXFPSXXGXXXPXXXTPPXXXXPPXXLPPXXPXXLPXXXXXPPPX 918
P PPP PP PS P T P P LPP P P P
Sbjct: 1190 PVPPPSEAPPVPK-----PSVGVPPVPPPSTAPPVPTPSAGLPP-VPVPTAKAPPVPAPS 1243
Query: 919 XXXP 930
P
Sbjct: 1244 SEAP 1247
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 32.3 bits (70), Expect = 0.10
Identities = 16/48 (33%), Positives = 17/48 (35%), Gaps = 3/48 (6%)
Frame = +3
Query: 726 PPPXXPPXPPPP---XPPXXAGPXFPLXXXXXXPXXXXPPXAPXAPXP 860
PP P PPPP PP + P P P AP P P
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
Score = 32.3 bits (70), Expect = 0.10
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = +3
Query: 723 PPPPXXPPXPPPPXPPXXAGP 785
PPPP PPP PP AGP
Sbjct: 1707 PPPPPMSVPPPPSAPPMPAGP 1727
Score = 29.9 bits (64), Expect = 0.54
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +3
Query: 723 PPPPXXPPXPPPPXPPXXAGPXFP 794
PP P PP PPP P + P P
Sbjct: 1721 PPMPAGPPSAPPPPLPASSAPSVP 1744
Score = 27.1 bits (57), Expect = 3.8
Identities = 12/38 (31%), Positives = 13/38 (34%)
Frame = +2
Query: 740 PXXPPXPXPPXXRXAXXSPLPXXXSPPPXXPPLRXXRP 853
P P PP P P PPP PP+ P
Sbjct: 1691 PVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPP 1728
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 31.9 bits (69), Expect = 0.13
Identities = 18/46 (39%), Positives = 19/46 (41%)
Frame = -2
Query: 853 GAXGAXGGXXXXGXXXXXXRGXXGPAXXGGXGGGGXGGXXGGGGXR 716
G+ G GG RG G GG GGG GG GG G R
Sbjct: 6 GSRGGRGGSRGGRGGFNGGRGGFG-GGRGGARGGGRGGARGGRGGR 50
Score = 30.3 bits (65), Expect = 0.41
Identities = 18/48 (37%), Positives = 19/48 (39%), Gaps = 2/48 (4%)
Frame = -2
Query: 853 GAXGAXGGXXXXGXXXXXXRGXXGPAXXGGXGG--GGXGGXXGGGGXR 716
G G+ GG G G A GG GG GG GG G G R
Sbjct: 10 GRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGR 57
Score = 29.9 bits (64), Expect = 0.54
Identities = 20/61 (32%), Positives = 20/61 (32%)
Frame = -3
Query: 909 GXXXXXRXXXGXGXWXXXXGRXXRRGGXXGGGXXXXGRGEXXAXRXXGGXGXGGXXGXXG 730
G R G GR RGG GG GRG R G GG G G
Sbjct: 12 GGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARG--GRGGRGGARGGRGGSSGGRGGAKG 69
Query: 729 G 727
G
Sbjct: 70 G 70
Score = 29.5 bits (63), Expect = 0.72
Identities = 17/41 (41%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Frame = -3
Query: 837 RGGXXG--GGXXXXGRGEXXAXRXXGGXGXGGXXGXXGGGG 721
RGG G GG GRG R G GG G GG G
Sbjct: 25 RGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRG 65
Score = 28.3 bits (60), Expect = 1.7
Identities = 18/53 (33%), Positives = 19/53 (35%)
Frame = -3
Query: 834 GGXXGGGXXXXGRGEXXAXRXXGGXGXGGXXGXXGGGGXDERXS**XGGVQXG 676
G G G GRG R G G GG G GG R GG + G
Sbjct: 6 GSRGGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGG--RGGARGG 56
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 31.1 bits (67), Expect = 0.24
Identities = 20/63 (31%), Positives = 21/63 (33%)
Frame = +3
Query: 726 PPPXXPPXPPPPXPPXXAGPXFPLXXXXXXPXXXXPPXAPXAPXPXXTXXXPXAXSXXXX 905
PP PP P P P + P P P PP P AP P A S
Sbjct: 139 PPTSAPPRPSIPPPSPASAPPIP-SKAPPIPSSLPPPAQPAAP----VKSPPSAPSLPSA 193
Query: 906 PPP 914
PP
Sbjct: 194 VPP 196
Score = 27.1 bits (57), Expect = 3.8
Identities = 13/41 (31%), Positives = 13/41 (31%)
Frame = +1
Query: 817 PXXXTPPXXXXPPXXLPPXXPXXLPXXXXXPPPXXXXPPXP 939
P TP PP PP P PP PP P
Sbjct: 128 PAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIP 168
Score = 25.8 bits (54), Expect = 8.8
Identities = 17/66 (25%), Positives = 20/66 (30%), Gaps = 1/66 (1%)
Frame = +1
Query: 739 PXPPPXPPPPXXXXGPXFPSXXGXXXPXXXTPPXXXXP-PXXLPPXXPXXLPXXXXXPPP 915
P P PP P P P+ P + P P P +PP P P
Sbjct: 159 PIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPPLSQAPVANTSSRP 218
Query: 916 XXXXPP 933
PP
Sbjct: 219 SSFAPP 224
Score = 25.8 bits (54), Expect = 8.8
Identities = 13/46 (28%), Positives = 15/46 (32%)
Frame = +3
Query: 723 PPPPXXPPXPPPPXPPXXAGPXFPLXXXXXXPXXXXPPXAPXAPXP 860
PP P P P P P + P P P P P + P
Sbjct: 165 PPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPPLSQAP 210
>SPAPB1A10.08 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 412
Score = 30.3 bits (65), Expect = 0.41
Identities = 27/113 (23%), Positives = 47/113 (41%)
Frame = +3
Query: 84 PHSVSRQYIMAAKFVVLFACIALAQGAMVRRDAPDFFKDIEHHTKEFHKTLEQQFNSLTK 263
P S S + A + L + V R F + +EH+ K+LE+Q + L +
Sbjct: 171 PSSSSCNLVNANSLDIYLNINNLKKSKSVPRLRGQFMEPVEHN-HPLSKSLEEQSSFLEQ 229
Query: 264 SKDAQDFSKAWKDGSESVLQQLNAFAKSLQGALGDANGKAKEALEQSRQNIER 422
SKDA A S+ + S + +L N K++ +L+ ++ R
Sbjct: 230 SKDASSNLTACNRSGSSLSSNFYSSRLSKKTSLASLN-KSRASLQHKIMSLSR 281
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 30.3 bits (65), Expect = 0.41
Identities = 20/67 (29%), Positives = 22/67 (32%)
Frame = +3
Query: 645 PXGXPXPXXSXXIELPXFTNXFFHLXPPPPXXPPXPPPPXPPXXAGPXFPLXXXXXXPXX 824
P G P P +P + PP PP P P P A P P P
Sbjct: 500 PPGVPLPPIPGAPGMPNLNMSQPPMVPPGMALPPGMPAPFPGYPAVPAMP-----GIPGA 554
Query: 825 XXPPXAP 845
PP AP
Sbjct: 555 TAPPGAP 561
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 29.5 bits (63), Expect = 0.72
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +3
Query: 723 PPPPXXPPXPPPPXPP 770
PPP PP PPP PP
Sbjct: 14 PPPGFEPPSQPPPPPP 29
Score = 27.9 bits (59), Expect = 2.2
Identities = 12/22 (54%), Positives = 12/22 (54%), Gaps = 6/22 (27%)
Frame = +3
Query: 723 PPPPXXPP------XPPPPXPP 770
PPPP PP PPPP PP
Sbjct: 9 PPPPPPPPGFEPPSQPPPPPPP 30
Score = 27.9 bits (59), Expect = 2.2
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = +3
Query: 723 PPPPXXPPXPPPPXPPXXAGPXF 791
PPPP P PP PP P +
Sbjct: 10 PPPPPPPGFEPPSQPPPPPPPGY 32
Score = 26.2 bits (55), Expect = 6.7
Identities = 12/25 (48%), Positives = 12/25 (48%), Gaps = 3/25 (12%)
Frame = +3
Query: 729 PPXXPPXPPPP---XPPXXAGPXFP 794
PP PP PPPP PP P P
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPP 29
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 29.5 bits (63), Expect = 0.72
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +3
Query: 723 PPPPXXPPXPPPPXPPXXAGPXFP 794
PP P PPPP PP AG P
Sbjct: 753 PPAPIMGGPPPPPPPPGVAGAGPP 776
Score = 29.5 bits (63), Expect = 0.72
Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 5/24 (20%)
Frame = +3
Query: 723 PPPPXXPPX-----PPPPXPPXXA 779
PPPP PP PPPP PP A
Sbjct: 761 PPPPPPPPGVAGAGPPPPPPPPPA 784
Score = 29.5 bits (63), Expect = 0.72
Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 4/24 (16%)
Frame = +3
Query: 723 PPPPXX----PPXPPPPXPPXXAG 782
PPPP PP PPPP P AG
Sbjct: 765 PPPPGVAGAGPPPPPPPPPAVSAG 788
Score = 27.1 bits (57), Expect = 3.8
Identities = 13/40 (32%), Positives = 13/40 (32%)
Frame = +3
Query: 726 PPPXXPPXPPPPXPPXXAGPXFPLXXXXXXPXXXXPPXAP 845
P P P P PP P GP P PP P
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 26.6 bits (56), Expect = 5.1
Identities = 13/27 (48%), Positives = 13/27 (48%), Gaps = 3/27 (11%)
Frame = +3
Query: 723 PPPPXXPPXPPPPXPP---XXAGPXFP 794
PPP PPPP PP AGP P
Sbjct: 752 PPPAPIMGGPPPPPPPPGVAGAGPPPP 778
Score = 25.8 bits (54), Expect = 8.8
Identities = 19/63 (30%), Positives = 21/63 (33%)
Frame = +1
Query: 751 PXPPPPXXXXGPXFPSXXGXXXPXXXTPPXXXXPPXXLPPXXPXXLPXXXXXPPPXXXXP 930
P PPPP P+ P P PP PP P + PPP P
Sbjct: 732 PPPPPPAVIV----PTPAPAPIPVPPPAPIMGGPP---PPPPPPGVAGAGPPPPP----P 780
Query: 931 PXP 939
P P
Sbjct: 781 PPP 783
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 29.1 bits (62), Expect = 0.95
Identities = 15/29 (51%), Positives = 15/29 (51%), Gaps = 2/29 (6%)
Frame = -2
Query: 796 RGXXGPAXXGGXGGGGXGGXXGG--GGXR 716
RG G GG GGG GG GG GG R
Sbjct: 151 RGGFGGNSRGGFGGGSRGGFGGGSRGGSR 179
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 28.7 bits (61), Expect = 1.3
Identities = 21/72 (29%), Positives = 22/72 (30%)
Frame = -3
Query: 939 GXGXGXXXXGGXXXXXRXXXGXGXWXXXXGRXXRRGGXXGGGXXXXGRGEXXAXRXXGGX 760
G G G GG G G + G GG G G G G
Sbjct: 187 GGGFGGFG-GGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPG 245
Query: 759 GXGGXXGXXGGG 724
G GG G GGG
Sbjct: 246 GFGGGLGGFGGG 257
>SPAC22F8.11 |plc1||phosphoinositide phospholipase C
Plc1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 899
Score = 27.9 bits (59), Expect = 2.2
Identities = 18/70 (25%), Positives = 32/70 (45%), Gaps = 3/70 (4%)
Frame = +3
Query: 171 RRDAPDFFKDIEHHTKEFHKTLEQQFNSLT---KSKDAQDFSKAWKDGSESVLQQLNAFA 341
++ DFFK + ++ H TL ++ NSL+ +K + G + +LN
Sbjct: 56 KKSEQDFFKMLSSRDRDAHSTLRKRSNSLSSFLSTKSTSASENKFHGGLNWLSLKLNLLL 115
Query: 342 KSLQGALGDA 371
+ LQG + A
Sbjct: 116 R-LQGRMNSA 124
>SPAC589.03c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 168
Score = 27.9 bits (59), Expect = 2.2
Identities = 12/44 (27%), Positives = 24/44 (54%)
Frame = +3
Query: 297 KDGSESVLQQLNAFAKSLQGALGDANGKAKEALEQSRQNIERTA 428
KDG+++ +LN FAK L + + +A + + IE+++
Sbjct: 111 KDGTDAFANELNLFAKKLGFSKNSFDARALDTESEDETEIEKSS 154
>SPBC21D10.06c |map4||cell agglutination protein
Map4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 948
Score = 27.5 bits (58), Expect = 2.9
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +2
Query: 41 LTHSSVFAVPVRISSALSLSTVHHGRQVRSSLRLHRSGPRS 163
++HSS ++P+ SS LS +T+H Q S + S P S
Sbjct: 473 ISHSSASSLPITPSSYLSNTTLHSSVQSSQSSQFTVSVPSS 513
>SPBC646.09c |int6|yin6|translation initiation factor
eIF3e|Schizosaccharomyces pombe|chr 2|||Manual
Length = 501
Score = 27.5 bits (58), Expect = 2.9
Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Frame = +3
Query: 276 QDFSKAWKDGSESVLQQLNAFAKSLQGALGD-ANGKAKEALEQSR-QNIE 419
+D + A+ + SVLQ+L+ + +QG LG N AL Q + QN++
Sbjct: 79 EDMANAFAEKRRSVLQELSELEEEVQGILGVLENPDLIAALRQDKGQNLQ 128
>SPBC30D10.07c |||biotin-protein ligase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 631
Score = 27.5 bits (58), Expect = 2.9
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -3
Query: 408 ASTVPKPPWPCRSRLRALPG 349
AST+ K PWP + L +PG
Sbjct: 38 ASTLEKEPWPASTALLVMPG 57
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 27.1 bits (57), Expect = 3.8
Identities = 11/29 (37%), Positives = 13/29 (44%)
Frame = +2
Query: 749 PPXPXPPXXRXAXXSPLPXXXSPPPXXPP 835
PP P A + LP +PPP PP
Sbjct: 167 PPPSFQPPSAAAPATSLPSDYNPPPPPPP 195
Score = 26.2 bits (55), Expect = 6.7
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = +3
Query: 726 PPPXXPPXPPPPXPP 770
P P PP PPP PP
Sbjct: 234 PLPAPPPPPPPTLPP 248
>SPBC1A4.03c |top2|ptr11|DNA topoisomerase II|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1485
Score = 26.6 bits (56), Expect = 5.1
Identities = 12/42 (28%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Frame = +3
Query: 177 DAPDFFKDIEHHTKEFHKTLEQ--QFNSLTKSKDAQDFSKAW 296
D +F D++ H K FH E+ + + +K D K W
Sbjct: 665 DMKSYFSDLDRHMKYFHAMQEKDAELIEMAFAKKKADVRKEW 706
>SPAC32A11.04c |tif212|tif22, SPAC6B12.17c|translation initiation
factor eIF2 beta subunit|Schizosaccharomyces pombe|chr
1|||Manual
Length = 321
Score = 26.2 bits (55), Expect = 6.7
Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = +3
Query: 213 TKEFHKTLEQQFNSLTKSKDAQDFSKAWKDGSESVLQQLNAFAKSLQ-GALGDA 371
+K+ + E+Q +T DFS K + L+AF K L+ + GDA
Sbjct: 89 SKKSSASAEEQTEDITTESGELDFSSMKKKKKKKKSADLSAFEKELEASSTGDA 142
>SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 803
Score = 26.2 bits (55), Expect = 6.7
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 6/71 (8%)
Frame = +3
Query: 231 TLEQQFNSLTKSKDAQDFSKAWKDGSESVLQQLNAFAKSLQGA------LGDANGKAKEA 392
T++ + SL K D + ++ ES L L L A L D+ KAK
Sbjct: 354 TIQIELESLRKETDTTSVER--REKLESKLTDLKEEQDKLSAAWEEERKLLDSIKKAKTE 411
Query: 393 LEQSRQNIERT 425
LEQ+R +ERT
Sbjct: 412 LEQARIELERT 422
>SPAC15A10.13 |ppk3||serine/threonine protein kinase
Ppk3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 637
Score = 25.8 bits (54), Expect = 8.8
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = -1
Query: 452 RVXLAELLGRALDVLPRLFQSLLGLAVRVSERSLETLGEGVELL 321
RV L +LL L+V+P+ + + L + S++T + VELL
Sbjct: 282 RVKLKQLLSSKLEVIPKNYIQKVVLNILFLLLSIDTHSDVVELL 325
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 25.8 bits (54), Expect = 8.8
Identities = 17/64 (26%), Positives = 18/64 (28%)
Frame = +1
Query: 739 PXPPPXPPPPXXXXGPXFPSXXGXXXPXXXTPPXXXXPPXXLPPXXPXXLPXXXXXPPPX 918
P PP P P G P PP P +PP P PPP
Sbjct: 208 PPPPMHHKPGEHMPPPPMHHEPGEHMPP---PPMHHEPGEHMPPPPMHHEPGEHMPPPPM 264
Query: 919 XXXP 930
P
Sbjct: 265 HHEP 268
Score = 25.8 bits (54), Expect = 8.8
Identities = 17/64 (26%), Positives = 18/64 (28%)
Frame = +1
Query: 739 PXPPPXPPPPXXXXGPXFPSXXGXXXPXXXTPPXXXXPPXXLPPXXPXXLPXXXXXPPPX 918
P PP P P G P PP P +PP P PPP
Sbjct: 221 PPPPMHHEPGEHMPPPPMHHEPGEHMPP---PPMHHEPGEHMPPPPMHHEPGEHMPPPPM 277
Query: 919 XXXP 930
P
Sbjct: 278 HHEP 281
Score = 25.8 bits (54), Expect = 8.8
Identities = 17/64 (26%), Positives = 18/64 (28%)
Frame = +1
Query: 739 PXPPPXPPPPXXXXGPXFPSXXGXXXPXXXTPPXXXXPPXXLPPXXPXXLPXXXXXPPPX 918
P PP P P G P PP P +PP P PPP
Sbjct: 234 PPPPMHHEPGEHMPPPPMHHEPGEHMPP---PPMHHEPGEHMPPPPMHHEPGEHMPPPPM 290
Query: 919 XXXP 930
P
Sbjct: 291 HHEP 294
Score = 25.8 bits (54), Expect = 8.8
Identities = 17/64 (26%), Positives = 18/64 (28%)
Frame = +1
Query: 739 PXPPPXPPPPXXXXGPXFPSXXGXXXPXXXTPPXXXXPPXXLPPXXPXXLPXXXXXPPPX 918
P PP P P G P PP P +PP P PPP
Sbjct: 247 PPPPMHHEPGEHMPPPPMHHEPGEHMPP---PPMHHEPGEHMPPPPMHHEPGEHMPPPPM 303
Query: 919 XXXP 930
P
Sbjct: 304 HHEP 307
Score = 25.8 bits (54), Expect = 8.8
Identities = 17/64 (26%), Positives = 18/64 (28%)
Frame = +1
Query: 739 PXPPPXPPPPXXXXGPXFPSXXGXXXPXXXTPPXXXXPPXXLPPXXPXXLPXXXXXPPPX 918
P PP P P G P PP P +PP P PPP
Sbjct: 260 PPPPMHHEPGEHMPPPPMHHEPGEHMPP---PPMHHEPGEHMPPPPMHHEPGEHMPPPPM 316
Query: 919 XXXP 930
P
Sbjct: 317 HHEP 320
Score = 25.8 bits (54), Expect = 8.8
Identities = 17/64 (26%), Positives = 18/64 (28%)
Frame = +1
Query: 739 PXPPPXPPPPXXXXGPXFPSXXGXXXPXXXTPPXXXXPPXXLPPXXPXXLPXXXXXPPPX 918
P PP P P G P PP P +PP P PPP
Sbjct: 273 PPPPMHHEPGEHMPPPPMHHEPGEHMPP---PPMHHEPGEHMPPPPMHHEPGEHMPPPPM 329
Query: 919 XXXP 930
P
Sbjct: 330 HHEP 333
>SPAC18B11.02c |||pseudouridylate synthase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 394
Score = 25.8 bits (54), Expect = 8.8
Identities = 16/64 (25%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = +3
Query: 141 CIALAQGAMVRRDAPDFFKDIEHHTKEFH-KTLEQQFNSLTKSKDAQDFSKAWKDGSESV 317
C + +G +RR P +++ I ++ KTL + FN+ + +++ + KA ++G V
Sbjct: 13 CEYVFKGDGLRRVPPYYYEYITFAKLRWYGKTLLEVFNTEFRDRESGYYEKAIRNGQVKV 72
Query: 318 LQQL 329
Q+
Sbjct: 73 NNQI 76
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,589,228
Number of Sequences: 5004
Number of extensions: 46611
Number of successful extensions: 500
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 165
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 332
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 479324640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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