Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP15_F_D22
         (952 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    22   0.56 
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       24   1.8  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    23   5.4  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    23   5.4  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   5.4  

>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 22.2 bits (45), Expect(2) = 0.56
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +2

Query: 911 PXPPPPXPXTPXP 949
           P PPPP P +  P
Sbjct: 341 PAPPPPPPSSSGP 353



 Score = 21.8 bits (44), Expect(2) = 0.56
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = +2

Query: 905 TPPXPPPPXP 934
           TPP P PP P
Sbjct: 337 TPPKPAPPPP 346



 Score = 21.8 bits (44), Expect = 9.4
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = +1

Query: 859 PPGXXPPPPXP 891
           PP   PPPP P
Sbjct: 338 PPKPAPPPPPP 348


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 24.2 bits (50), Expect = 1.8
 Identities = 10/27 (37%), Positives = 10/27 (37%)
 Frame = +1

Query: 856 PPPGXXPPPPXPXGXHNPPPXPPPXXP 936
           P P   P  P      NP   PPP  P
Sbjct: 25  PSPHQSPQAPQRGSPPNPSQGPPPGGP 51


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 22.6 bits (46), Expect = 5.4
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = -2

Query: 924 GGGXGGVVXXXXGWGGGA 871
           G G  G+V    GWGG A
Sbjct: 601 GRGQYGIVFACDGWGGKA 618


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 22.6 bits (46), Expect = 5.4
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = -2

Query: 924 GGGXGGVVXXXXGWGGGA 871
           G G  G+V    GWGG A
Sbjct: 639 GRGQYGIVFACDGWGGKA 656


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.6 bits (46), Expect = 5.4
 Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 3/35 (8%)
 Frame = +3

Query: 540  TPGKXM*PKGXQKASNXKKAPXLPFSP---*XPPP 635
            +PG    P G +  S  +  P LPF+P     PPP
Sbjct: 1134 SPGGIPGPNGIKMPSFMEGMPHLPFTPFNFWNPPP 1168


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,325
Number of Sequences: 438
Number of extensions: 4734
Number of successful extensions: 18
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 31202262
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)