Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP15_F_D21
         (831 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41538-2|AAG00010.1|  997|Caenorhabditis elegans Hypothetical pr...    30   2.3  
AL110477-13|CAB54337.2|  789|Caenorhabditis elegans Hypothetical...    30   2.3  
AF230279-1|AAG16654.1|  789|Caenorhabditis elegans SWI3-like pro...    30   2.3  
Z66565-6|CAA91483.1|  165|Caenorhabditis elegans Hypothetical pr...    29   4.1  
Z81034-4|CAB02729.1|  541|Caenorhabditis elegans Hypothetical pr...    28   7.1  
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def...    28   7.1  
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def...    28   7.1  
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.    28   7.1  

>U41538-2|AAG00010.1|  997|Caenorhabditis elegans Hypothetical
           protein R04E5.8a protein.
          Length = 997

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 12/31 (38%), Positives = 14/31 (45%)
 Frame = +1

Query: 508 PPPPPPXXKKKXFFFXXPPPXGXXXKKIXPP 600
           PPPPPP  K +      PPP      +  PP
Sbjct: 122 PPPPPPPRKSRAGGSSPPPPPPPRVPRTPPP 152


>AL110477-13|CAB54337.2|  789|Caenorhabditis elegans Hypothetical
           protein Y113G7B.23 protein.
          Length = 789

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 14/49 (28%), Positives = 23/49 (46%)
 Frame = +2

Query: 176 PNGQNFHLXPXKNXXGXGPPQFYXXRNQKTPGKXEIPPFLGSPXPXKKK 322
           P GQ ++  P       GPP  Y  + Q+ P   +  P+ G P P +++
Sbjct: 684 PQGQQYYGGPPPPGQPYGPPGGYPPQQQRPP--YQAQPYPGPPPPQQQR 730


>AF230279-1|AAG16654.1|  789|Caenorhabditis elegans SWI3-like
           protein protein.
          Length = 789

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 14/49 (28%), Positives = 23/49 (46%)
 Frame = +2

Query: 176 PNGQNFHLXPXKNXXGXGPPQFYXXRNQKTPGKXEIPPFLGSPXPXKKK 322
           P GQ ++  P       GPP  Y  + Q+ P   +  P+ G P P +++
Sbjct: 684 PQGQQYYGGPPPPGQPYGPPGGYPPQQQRPP--YQAQPYPGPPPPQQQR 730


>Z66565-6|CAA91483.1|  165|Caenorhabditis elegans Hypothetical
           protein T04F8.8 protein.
          Length = 165

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 14/46 (30%), Positives = 19/46 (41%)
 Frame = +1

Query: 466 GGGGXXXKKXKXXXPPPPPPXXKKKXFFFXXPPPXGXXXKKIXPPP 603
           GGGG    + +   PPPPPP  + +      P P      +  P P
Sbjct: 83  GGGGGGYGRPQGYVPPPPPPPTQPEPEPEPRPEPQPEPQPEPQPEP 128


>Z81034-4|CAB02729.1|  541|Caenorhabditis elegans Hypothetical
           protein C15C6.3 protein.
          Length = 541

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +1

Query: 508 PPPPPPXXKKKXFFFXXPPP 567
           PPPPPP  + +   F  PPP
Sbjct: 477 PPPPPPPPENEPEEFPPPPP 496


>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
           protein 1, isoformb protein.
          Length = 1437

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 16/44 (36%), Positives = 16/44 (36%), Gaps = 3/44 (6%)
 Frame = +1

Query: 508 PPPPPPXXKKKXFFF---XXPPPXGXXXKKIXPPPXXFFFXXPP 630
           PPPPPP              PPP G       PPP   F   PP
Sbjct: 742 PPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPP 785


>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
           protein 1, isoforma protein.
          Length = 1435

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 16/44 (36%), Positives = 16/44 (36%), Gaps = 3/44 (6%)
 Frame = +1

Query: 508 PPPPPPXXKKKXFFF---XXPPPXGXXXKKIXPPPXXFFFXXPP 630
           PPPPPP              PPP G       PPP   F   PP
Sbjct: 742 PPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPP 785


>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
          Length = 1018

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 16/44 (36%), Positives = 16/44 (36%), Gaps = 3/44 (6%)
 Frame = +1

Query: 508 PPPPPPXXKKKXFFF---XXPPPXGXXXKKIXPPPXXFFFXXPP 630
           PPPPPP              PPP G       PPP   F   PP
Sbjct: 325 PPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPP 368


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,448,965
Number of Sequences: 27780
Number of extensions: 319888
Number of successful extensions: 3920
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 606
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2822
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2061488408
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)