Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP15_F_D17
(976 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 44 3e-05
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 42 1e-04
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 42 1e-04
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 42 1e-04
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 39 0.001
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 38 0.002
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 38 0.003
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 38 0.003
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 29 0.006
SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyc... 31 0.19
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 31 0.25
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 30 0.43
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 30 0.43
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 30 0.57
SPCC645.07 |rgf1||RhoGEF for Rho1, Rgf1|Schizosaccharomyces pomb... 28 2.3
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 28 2.3
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 23 3.6
SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces pomb... 27 5.3
SPBC11B10.08 |||conserved fungal protein|Schizosaccharomyces pom... 26 7.0
SPBP8B7.16c |dbp2||ATP-dependent RNA helicase Dbp2|Schizosacchar... 26 7.0
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 26 7.0
SPBC1347.05c |||DNAJ domain protein Scj1|Schizosaccharomyces pom... 26 9.3
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 44.0 bits (99), Expect = 3e-05
Identities = 29/92 (31%), Positives = 29/92 (31%), Gaps = 4/92 (4%)
Frame = +1
Query: 613 PXXPXTRGXPPNPXCXXXAPXPPXPXXGPXXGGXXXXXXXXXKXXKPP-PPPXXXG---P 780
P G P P AP PP P P G PP PPP G P
Sbjct: 342 PPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAP 401
Query: 781 PPPPGLKXXXRPPPPXXPPPXPPPXPPPXXXP 876
PP PP PP PP PP P
Sbjct: 402 ALPPLGNASRTSTPPVPTPPSLPPSAPPSLPP 433
Score = 35.5 bits (78), Expect = 0.011
Identities = 16/38 (42%), Positives = 16/38 (42%)
Frame = +1
Query: 751 PPPPPXXXGPPPPPGLKXXXRPPPPXXPPPXPPPXPPP 864
PP PP PP P P PP P P P P P P
Sbjct: 447 PPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAP 484
Score = 35.1 bits (77), Expect = 0.015
Identities = 27/93 (29%), Positives = 27/93 (29%), Gaps = 5/93 (5%)
Frame = +1
Query: 613 PXXPXTRGXPP--NPXCXXXAPXPPXPXXGPXXGGXXXXXXXXXKXXKPPPPPXXXGPPP 786
P RG PP N P PP P P PPPPP P
Sbjct: 316 PPSRRNRGKPPIGNGSSNSSLPPPPPP---PRSNAAGSIPLPPQGRSAPPPPPPRSAPST 372
Query: 787 ---PPGLKXXXRPPPPXXPPPXPPPXPPPXXXP 876
PP L P PPP P P P
Sbjct: 373 GRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPP 405
Score = 32.7 bits (71), Expect = 0.081
Identities = 16/37 (43%), Positives = 17/37 (45%), Gaps = 2/37 (5%)
Frame = +1
Query: 760 PPXXXGPPPPPGLKXXXRPPP--PXXPPPXPPPXPPP 864
P PP PP + RPP P P PPP PPP
Sbjct: 224 PTSTSAPPIPPSI-PSSRPPERVPSLSAPAPPPIPPP 259
Score = 32.7 bits (71), Expect = 0.081
Identities = 20/69 (28%), Positives = 20/69 (28%)
Frame = +1
Query: 676 PPXPXXGPXXGGXXXXXXXXXKXXKPPPPPXXXGPPPPPGLKXXXRPPPPXXPPPXPPPX 855
PP P G PPPPP PP PP PP PPP
Sbjct: 312 PPPPPPSRRNRGKPPIGNGSSNSSLPPPPP----PPRSNAAGSIPLPPQGRSAPPPPPPR 367
Query: 856 PPPXXXPXP 882
P P
Sbjct: 368 SAPSTGRQP 376
Score = 32.3 bits (70), Expect = 0.11
Identities = 16/45 (35%), Positives = 17/45 (37%), Gaps = 1/45 (2%)
Frame = +1
Query: 751 PPPPPXXXGPPPPPGLKXXXRP-PPPXXPPPXPPPXPPPXXXPXP 882
PP PP PP + P PPP PP PP P P
Sbjct: 230 PPIPPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRP 274
Score = 32.3 bits (70), Expect = 0.11
Identities = 25/95 (26%), Positives = 26/95 (27%), Gaps = 5/95 (5%)
Frame = +1
Query: 613 PXXPXTRGXPPNPXCXXXA----PXPPXPXXGPXXGGXXXXXXXXXKXXKPPPPPXXXGP 780
P + G P P A P PP G P P P P
Sbjct: 366 PRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPP 425
Query: 781 PPPPGLKXXXRPPPPXXPPPXPP-PXPPPXXXPXP 882
PP L P P P PP P P P P
Sbjct: 426 SAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLP 460
Score = 30.7 bits (66), Expect = 0.33
Identities = 20/72 (27%), Positives = 21/72 (29%)
Frame = +1
Query: 643 PNPXCXXXAPXPPXPXXGPXXGGXXXXXXXXXKXXKPPPPPXXXGPPPPPGLKXXXRPPP 822
P P + P P P P PP G P P L PP
Sbjct: 418 PTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPL-----PPA 472
Query: 823 PXXPPPXPPPXP 858
PPP P P P
Sbjct: 473 APAPPPAPAPAP 484
Score = 29.9 bits (64), Expect = 0.57
Identities = 19/55 (34%), Positives = 19/55 (34%), Gaps = 11/55 (20%)
Frame = +1
Query: 751 PPPPPXXXGPPPPPGLKXXXRPPPPXXP-----PPXP------PPXPPPXXXPXP 882
PP P P PP L PP P PP P PP PP P P
Sbjct: 424 PPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPP 478
Score = 28.3 bits (60), Expect = 1.7
Identities = 14/33 (42%), Positives = 14/33 (42%), Gaps = 4/33 (12%)
Frame = +1
Query: 778 PPPPPGLKXXXRPPPP----XXPPPXPPPXPPP 864
PPPPP R PP PPP PPP
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPP 343
Score = 27.5 bits (58), Expect = 3.0
Identities = 14/35 (40%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
Frame = +1
Query: 739 KXXKPPPPPXXXGPPPPP-GLKXXXRPPPPXXPPP 840
K PPPPP PP G PP PPP
Sbjct: 309 KRPPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPP 343
Score = 27.1 bits (57), Expect = 4.0
Identities = 21/75 (28%), Positives = 22/75 (29%), Gaps = 2/75 (2%)
Frame = +2
Query: 671 PXPPTPXXXPGXGXXPXAPP--PPXKXXNXXXXXXXXXXXXXRA*XXXXAPPPPXTPPXX 844
P PTP P P APP PP + A P P
Sbjct: 415 PPVPTPPSLP-----PSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPL 469
Query: 845 PPXXPPPXXXPXPXP 889
PP P P P P P
Sbjct: 470 PPAAPAPPPAPAPAP 484
Score = 26.2 bits (55), Expect = 7.0
Identities = 12/27 (44%), Positives = 12/27 (44%), Gaps = 1/27 (3%)
Frame = +2
Query: 812 APP-PPXTPPXXPPXXPPPXXXPXPXP 889
APP PP P PP P P P P
Sbjct: 229 APPIPPSIPSSRPPERVPSLSAPAPPP 255
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 42.3 bits (95), Expect = 1e-04
Identities = 31/95 (32%), Positives = 31/95 (32%), Gaps = 7/95 (7%)
Frame = +1
Query: 613 PXXPXTRGXPPNPXCXXXAPXPPXPXXGPXXGGXXXXXXXXXKXXKPPPPPXXXGPPPPP 792
P P G PP P AP P P P PP P G PP P
Sbjct: 1131 PPVPVPSGAPPVPKPSVAAPPVPAPSGAPPV--------PKPSVAAPPVPAPSSGIPPVP 1182
Query: 793 GLKXXXRP-PPPXXPPPXP------PPXPPPXXXP 876
P PPP PP P PP PPP P
Sbjct: 1183 KPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAP 1217
Score = 41.5 bits (93), Expect = 2e-04
Identities = 29/90 (32%), Positives = 30/90 (33%), Gaps = 2/90 (2%)
Frame = +1
Query: 613 PXXPXTRGXPPNPXCXXXAPXPPXPXXGPXXGGXXXXXXXXXKXXKPPPPPXXXGPP-PP 789
P P G PP P AP P P G PP PP PP P
Sbjct: 1150 PPVPAPSGAPPVPKPSVAAPPVPAPSSG-------IPPVPKPAAGVPPVPPPSEAPPVPK 1202
Query: 790 PGLKXXXRPPPPXXPP-PXPPPXPPPXXXP 876
P + PPP PP P P PP P
Sbjct: 1203 PSVGVPPVPPPSTAPPVPTPSAGLPPVPVP 1232
Score = 39.9 bits (89), Expect = 5e-04
Identities = 27/92 (29%), Positives = 27/92 (29%), Gaps = 2/92 (2%)
Frame = +1
Query: 613 PXXPXTRGXPPNPXCXXXAPXPPXPXXG-PXXGGXXXXXXXXXKXXKPPPPPXXXGPPPP 789
P P G PP P AP P P P PP P G PP
Sbjct: 1083 PPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPV 1142
Query: 790 PGLKXXXRP-PPPXXPPPXPPPXPPPXXXPXP 882
P P P P PP P P P P
Sbjct: 1143 PKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAP 1174
Score = 38.3 bits (85), Expect = 0.002
Identities = 25/89 (28%), Positives = 26/89 (29%), Gaps = 1/89 (1%)
Frame = +1
Query: 613 PXXPXTRGXPPNPXCXXXAPXPPXPXXGPXXGGXXXXXXXXXKXXKPPPPPXXXGPPPPP 792
P P PP P AP P P P P P P P P P
Sbjct: 1041 PPVPIPTSTPPVPKSSSGAPSAPPPVPAP---SSEIPSIPAPSGAPPVPAPSGIPPVPKP 1097
Query: 793 GLKXXXRPPPPXXPPPXP-PPXPPPXXXP 876
+ P P PP P P PP P
Sbjct: 1098 SVAAPPVPKPSVAVPPVPAPSGAPPVPKP 1126
Score = 31.5 bits (68), Expect = 0.19
Identities = 25/90 (27%), Positives = 26/90 (28%), Gaps = 2/90 (2%)
Frame = +1
Query: 613 PXXPXTRGXPPNPXCXXXAPXPPXPXXGPXXGGXXXXXXXXXKXXKPPPPPXXXGPP-PP 789
P P G PP P P P P PP P PP P
Sbjct: 1074 PSIPAPSGAPPVPAPSGIPPVPKPSVAAPPV--------PKPSVAVPPVPAPSGAPPVPK 1125
Query: 790 PGLKXXXRPPPPXXPP-PXPPPXPPPXXXP 876
P + P P PP P P PP P
Sbjct: 1126 PSVAAPPVPVPSGAPPVPKPSVAAPPVPAP 1155
Score = 31.5 bits (68), Expect = 0.19
Identities = 21/90 (23%), Positives = 23/90 (25%)
Frame = +1
Query: 613 PXXPXTRGXPPNPXCXXXAPXPPXPXXGPXXGGXXXXXXXXXKXXKPPPPPXXXGPPPPP 792
P + G PP P P P P P PP P PP
Sbjct: 1170 PVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPV 1229
Query: 793 GLKXXXRPPPPXXPPPXPPPXPPPXXXPXP 882
+ PP P P P P P
Sbjct: 1230 PVPTAKAPPVPAPSSEAPSVSTPRSSVPSP 1259
Score = 31.1 bits (67), Expect = 0.25
Identities = 26/90 (28%), Positives = 26/90 (28%), Gaps = 2/90 (2%)
Frame = +1
Query: 613 PXXPXTRGXPPNPXCXXXAPXPPXPXXGPXXGGXXXXXXXXXKXXKPPPPPXXXGPPPPP 792
P P G PP P AP P P P P P P PP P
Sbjct: 1112 PPVPAPSGAPPVPKPSVAAPPVPVPSGAP-----------------PVPKPSVAAPPVPA 1154
Query: 793 GLKXXXRPPPPXXPPPXPPPXP--PPXXXP 876
P P PP P P PP P
Sbjct: 1155 PSGAPPVPKPSVAAPPVPAPSSGIPPVPKP 1184
Score = 27.9 bits (59), Expect = 2.3
Identities = 15/41 (36%), Positives = 15/41 (36%)
Frame = +1
Query: 754 PPPPXXXGPPPPPGLKXXXRPPPPXXPPPXPPPXPPPXXXP 876
PP P PP L PP P P PP P P P
Sbjct: 1012 PPVPKLSSKAPPVPLPSADAPPIPV--PSTAPPVPIPTSTP 1050
Score = 27.9 bits (59), Expect = 2.3
Identities = 13/38 (34%), Positives = 13/38 (34%)
Frame = +1
Query: 751 PPPPPXXXGPPPPPGLKXXXRPPPPXXPPPXPPPXPPP 864
PP P PP P P P PPP P P
Sbjct: 1032 PPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAP 1069
Score = 27.9 bits (59), Expect = 2.3
Identities = 18/73 (24%), Positives = 19/73 (26%)
Frame = +2
Query: 671 PXPPTPXXXPGXGXXPXAPPPPXKXXNXXXXXXXXXXXXXRA*XXXXAPPPPXTPPXXPP 850
P P P P A PP + APP P PP
Sbjct: 1150 PPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPP 1209
Query: 851 XXPPPXXXPXPXP 889
PP P P P
Sbjct: 1210 VPPPSTAPPVPTP 1222
Score = 26.6 bits (56), Expect = 5.3
Identities = 17/50 (34%), Positives = 18/50 (36%), Gaps = 7/50 (14%)
Frame = +1
Query: 748 KPPPPPXXXGPPPPPGLKXXXRPPP-PXXPPPXP------PPXPPPXXXP 876
K PP P PP + P P P PP P P PPP P
Sbjct: 1020 KAPPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAP 1069
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 42.3 bits (95), Expect = 1e-04
Identities = 19/38 (50%), Positives = 19/38 (50%)
Frame = +1
Query: 751 PPPPPXXXGPPPPPGLKXXXRPPPPXXPPPXPPPXPPP 864
PPP P GPPPP PPPP PPP PPP
Sbjct: 752 PPPAPIMGGPPPP--------PPPPGVAGAGPPPPPPP 781
Score = 40.3 bits (90), Expect = 4e-04
Identities = 22/51 (43%), Positives = 22/51 (43%), Gaps = 13/51 (25%)
Frame = +1
Query: 751 PPPPPXXXGPPP-------PPGLKXXXRPPPPXXPP------PXPPPXPPP 864
PPPPP P P PP PPPP PP P PPP PPP
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 32.7 bits (71), Expect = 0.081
Identities = 17/39 (43%), Positives = 18/39 (46%), Gaps = 4/39 (10%)
Frame = +1
Query: 778 PPPPPGLKXXXRPPPPXXPPPXPPPXP----PPXXXPXP 882
PPPPP + P P P P PPP P PP P P
Sbjct: 733 PPPPPAVIV---PTPAPAPIPVPPPAPIMGGPPPPPPPP 768
Score = 32.7 bits (71), Expect = 0.081
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +2
Query: 668 PPXPPTPXXXPGXGXXPXAPPPP 736
PP PP P G G P PPPP
Sbjct: 761 PPPPPPPPGVAGAGPPPPPPPPP 783
Score = 31.9 bits (69), Expect = 0.14
Identities = 15/36 (41%), Positives = 15/36 (41%), Gaps = 3/36 (8%)
Frame = +1
Query: 778 PPPPPGLKXXXRPPPPXXPPPXPPP---XPPPXXXP 876
PPPPP P P P P P P PPP P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPP 767
Score = 28.3 bits (60), Expect = 1.7
Identities = 16/55 (29%), Positives = 17/55 (30%)
Frame = +2
Query: 812 APPPPXTPPXXPPXXPPPXXXPXPXPXXXXXXXXXXXXXXXGGXPXXGGXXPPPA 976
+PPPP P P P P P P G P PPPA
Sbjct: 731 SPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPP-PPPPPPA 784
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 41.9 bits (94), Expect = 1e-04
Identities = 27/68 (39%), Positives = 29/68 (42%)
Frame = -1
Query: 796 GPGGGGGXPXXGGGGVXXFXRGGGGXGXXPPPXXPXGGXGXXGXXXXKXGWGGXPGXGGX 617
G GGG G P G GG F G GG G GG G G G+GG PG G
Sbjct: 192 GFGGGSGGPPPGPGGFGGFG-GFGGEGHHHGGHGGFGG-GPGGFEGGPGGFGGGPGGFGG 249
Query: 616 XVSXPGGG 593
+ GGG
Sbjct: 250 GLGGFGGG 257
Score = 41.1 bits (92), Expect = 2e-04
Identities = 26/68 (38%), Positives = 27/68 (39%), Gaps = 1/68 (1%)
Frame = -1
Query: 796 GPGGGGGXPXXGGGGVXXFXRGGGGXGXXPPPXXPXG-GXGXXGXXXXKXGWGGXPGXGG 620
GPGG GG GG G GG G G P G G G G G+GG PG G
Sbjct: 203 GPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFG 262
Query: 619 XXVSXPGG 596
GG
Sbjct: 263 GGPGGHGG 270
Score = 37.5 bits (83), Expect = 0.003
Identities = 21/44 (47%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = -3
Query: 881 GXGXXXGGGXGGGXGGGXXGGGGRXXXFRPGG-GGGPXXXGGGG 753
G G GG G G G G GGG PGG GGGP GG G
Sbjct: 229 GPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGGPGGHGGPG 272
Score = 36.7 bits (81), Expect = 0.005
Identities = 26/76 (34%), Positives = 26/76 (34%), Gaps = 2/76 (2%)
Frame = -3
Query: 971 GGGXXPPXXXXXXXXXXXXXXXXXXXXXGXGXGXXXGG--GXGGGXGGGXXGGGGRXXXF 798
GG PP G G GG G GG GGG G GG F
Sbjct: 195 GGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGF 254
Query: 797 RPGGGGGPXXXGGGGG 750
GGGP GGG G
Sbjct: 255 ----GGGPGGFGGGPG 266
Score = 34.7 bits (76), Expect = 0.020
Identities = 21/55 (38%), Positives = 21/55 (38%)
Frame = -1
Query: 760 GGGVXXFXRGGGGXGXXPPPXXPXGGXGXXGXXXXKXGWGGXPGXGGXXVSXPGG 596
GGG F GGG G P P G G G G GG G G PGG
Sbjct: 187 GGGFGGF--GGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGG 239
Score = 31.9 bits (69), Expect = 0.14
Identities = 30/88 (34%), Positives = 31/88 (35%), Gaps = 3/88 (3%)
Frame = -3
Query: 863 GGGXGG-GXG-GGXXGGGGRXXXFRPGGGGGPXXXGGGGGLXXFXXXXXXXXXPPXXGPX 690
GGG GG G G GG G G F G GG GG GG GP
Sbjct: 187 GGGFGGFGGGSGGPPPGPGGFGGF-GGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPG 245
Query: 689 XGXGGXGA-XXXQXGLGGXPRVXGXXGF 609
GG G G GG P G G+
Sbjct: 246 GFGGGLGGFGGGPGGFGGGPGGHGGPGW 273
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 38.7 bits (86), Expect = 0.001
Identities = 18/42 (42%), Positives = 18/42 (42%)
Frame = +1
Query: 751 PPPPPXXXGPPPPPGLKXXXRPPPPXXPPPXPPPXPPPXXXP 876
P PPP PPPP PP P PP PPP P P
Sbjct: 1705 PTPPPPPMSVPPPPS-----APPMPAGPPSAPPPPLPASSAP 1741
Score = 37.1 bits (82), Expect = 0.004
Identities = 19/41 (46%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Frame = +1
Query: 760 PPXXXGP-PPPPGLKXXXRPPPPXXPP-PXPPPXPPPXXXP 876
PP P PPPP + PPPP PP P PP PP P
Sbjct: 1699 PPQMSAPTPPPPPMSV---PPPPSAPPMPAGPPSAPPPPLP 1736
Score = 35.9 bits (79), Expect = 0.009
Identities = 17/40 (42%), Positives = 17/40 (42%), Gaps = 2/40 (5%)
Frame = +1
Query: 751 PPPPPXXXGPPP--PPGLKXXXRPPPPXXPPPXPPPXPPP 864
PPPPP PPP PP PPP P P P P
Sbjct: 1707 PPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
Score = 35.5 bits (78), Expect = 0.011
Identities = 18/45 (40%), Positives = 19/45 (42%), Gaps = 4/45 (8%)
Frame = +1
Query: 760 PPXXXGPPPPPGLKXXXRPPPPXX--PPPXPPPXP--PPXXXPXP 882
PP PP + PPPP PPP PP P PP P P
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 26.6 bits (56), Expect = 5.3
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +2
Query: 677 PPTPXXXPGXGXXPXAPPPP 736
PP P P P APPPP
Sbjct: 1715 PPPPSAPPMPAGPPSAPPPP 1734
Score = 26.2 bits (55), Expect = 7.0
Identities = 13/39 (33%), Positives = 15/39 (38%), Gaps = 4/39 (10%)
Frame = +1
Query: 778 PPPPPGLKXXXRPPPPXXPPPXPPP----XPPPXXXPXP 882
P P ++ PP P PPP PPP P P
Sbjct: 1686 PVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMP 1724
Score = 26.2 bits (55), Expect = 7.0
Identities = 10/25 (40%), Positives = 11/25 (44%)
Frame = +2
Query: 815 PPPPXTPPXXPPXXPPPXXXPXPXP 889
PPPP + P P P P P P
Sbjct: 1708 PPPPMSVPPPPSAPPMPAGPPSAPP 1732
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 37.9 bits (84), Expect = 0.002
Identities = 20/44 (45%), Positives = 20/44 (45%)
Frame = -3
Query: 881 GXGXXXGGGXGGGXGGGXXGGGGRXXXFRPGGGGGPXXXGGGGG 750
G G GG GGG GG G GGR R G GG GG G
Sbjct: 27 GFGGGRGGARGGGRGGARGGRGGRGGA-RGGRGGSSGGRGGAKG 69
Score = 35.9 bits (79), Expect = 0.009
Identities = 20/46 (43%), Positives = 20/46 (43%), Gaps = 2/46 (4%)
Frame = -3
Query: 881 GXGXXXGG--GXGGGXGGGXXGGGGRXXXFRPGGGGGPXXXGGGGG 750
G G GG G GGG GG GG G R G GG GG G
Sbjct: 17 GRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSG 62
Score = 32.3 bits (70), Expect = 0.11
Identities = 17/37 (45%), Positives = 17/37 (45%)
Frame = -3
Query: 860 GGXGGGXGGGXXGGGGRXXXFRPGGGGGPXXXGGGGG 750
GG GG GG GGGR G GG GG GG
Sbjct: 16 GGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGG 52
Score = 32.3 bits (70), Expect = 0.11
Identities = 18/42 (42%), Positives = 18/42 (42%)
Frame = -3
Query: 881 GXGXXXGGGXGGGXGGGXXGGGGRXXXFRPGGGGGPXXXGGG 756
G G GGG GG GG GG R R G GG GG
Sbjct: 31 GRGGARGGGRGGARGGRGGRGGARGG--RGGSSGGRGGAKGG 70
Score = 30.3 bits (65), Expect = 0.43
Identities = 17/37 (45%), Positives = 17/37 (45%)
Frame = -3
Query: 860 GGXGGGXGGGXXGGGGRXXXFRPGGGGGPXXXGGGGG 750
GG GG GG GGR GGG G GG GG
Sbjct: 9 GGRGGSRGGRGGFNGGRGGF---GGGRGGARGGGRGG 42
Score = 28.7 bits (61), Expect = 1.3
Identities = 19/46 (41%), Positives = 19/46 (41%), Gaps = 2/46 (4%)
Frame = -3
Query: 881 GXGXXXGGGXG-GGXGGGXXGG-GGRXXXFRPGGGGGPXXXGGGGG 750
G G GG G G GG GG GG R G GG GG G
Sbjct: 10 GRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARG 55
Score = 27.1 bits (57), Expect = 4.0
Identities = 16/35 (45%), Positives = 16/35 (45%)
Frame = -3
Query: 857 GXGGGXGGGXXGGGGRXXXFRPGGGGGPXXXGGGG 753
G GG GG GG G R G GGG GGG
Sbjct: 6 GSRGGRGGS-RGGRGGFNGGRGGFGGGRGGARGGG 39
Score = 27.1 bits (57), Expect = 4.0
Identities = 14/26 (53%), Positives = 14/26 (53%)
Frame = -2
Query: 888 GXGXGXXXGGGXXGGXXGGVXGGGGA 811
G G G GGG GG GG G GGA
Sbjct: 29 GGGRGGARGGG-RGGARGGRGGRGGA 53
Score = 25.8 bits (54), Expect = 9.3
Identities = 18/41 (43%), Positives = 18/41 (43%), Gaps = 3/41 (7%)
Frame = -3
Query: 863 GGGXGG-GXGGGXXGGGGRXXXFRPG--GGGGPXXXGGGGG 750
GG G G GG GG G R G GGG GG GG
Sbjct: 9 GGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGG 49
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 37.5 bits (83), Expect = 0.003
Identities = 15/28 (53%), Positives = 17/28 (60%)
Frame = +1
Query: 757 PPPXXXGPPPPPGLKXXXRPPPPXXPPP 840
PP PPPPPG + +PPPP PPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPP--PPP 30
Score = 37.1 bits (82), Expect = 0.004
Identities = 16/29 (55%), Positives = 16/29 (55%)
Frame = +1
Query: 778 PPPPPGLKXXXRPPPPXXPPPXPPPXPPP 864
PPPPP PPP PP PPP PPP
Sbjct: 9 PPPPP-------PPPGFEPPSQPPPPPPP 30
Score = 31.5 bits (68), Expect = 0.19
Identities = 16/31 (51%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Frame = +1
Query: 775 GPPPPPGLKXXXRPPPPXXPPPX--PPPXPP 861
G PPPP PPPP PP PPP PP
Sbjct: 7 GNPPPP-------PPPPGFEPPSQPPPPPPP 30
Score = 31.1 bits (67), Expect = 0.25
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = +1
Query: 787 PPGLKXXXRPPPPXXPPPXPPPXPPPXXXP 876
PPG PPPP PP PP PP P
Sbjct: 5 PPG-----NPPPPPPPPGFEPPSQPPPPPP 29
Score = 30.7 bits (66), Expect = 0.33
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +2
Query: 815 PPPPXTPPXXPPXXPPPXXXP 877
PPPP P PP PPP P
Sbjct: 10 PPPPPPPGFEPPSQPPPPPPP 30
Score = 29.1 bits (62), Expect = 0.99
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +1
Query: 814 PPPPXXPPPXPPPXPPPXXXPXP 882
PP PPP PP PP P P
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPP 27
Score = 27.9 bits (59), Expect = 2.3
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +2
Query: 815 PPPPXTPPXXPPXXPPPXXXPXPXP 889
PPPP PP P PP P P P
Sbjct: 9 PPPPPPPPGFEPPSQPP---PPPPP 30
Score = 27.1 bits (57), Expect = 4.0
Identities = 14/27 (51%), Positives = 14/27 (51%), Gaps = 2/27 (7%)
Frame = +1
Query: 751 PPPPPXXXGPP--PPPGLKXXXRPPPP 825
PPPPP PP PPP PPPP
Sbjct: 11 PPPPPPGFEPPSQPPP-------PPPP 30
Score = 26.6 bits (56), Expect = 5.3
Identities = 11/18 (61%), Positives = 11/18 (61%), Gaps = 3/18 (16%)
Frame = +1
Query: 751 PPP---PPXXXGPPPPPG 795
PPP PP PPPPPG
Sbjct: 14 PPPGFEPPSQPPPPPPPG 31
Score = 25.8 bits (54), Expect = 9.3
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = +2
Query: 668 PPXPPTPXXXPGXGXXPXAPPPP 736
P PP P PG PPPP
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPP 28
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 37.5 bits (83), Expect = 0.003
Identities = 27/92 (29%), Positives = 28/92 (30%), Gaps = 5/92 (5%)
Frame = +1
Query: 622 PXTRGXPPNPXCXXXAPX--PPXPXXGPXXGGXXXXXXXXXKXXKPPPPPXXXGPPPPPG 795
P + PP P P PP P P K PP P PP P
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPS-----KAPPIPSSLPPPAQPA 178
Query: 796 LKXXXRPPPPXXP---PPXPPPXPPPXXXPXP 882
P P P PP PP PPP P
Sbjct: 179 APVKSPPSAPSLPSAVPPMPPKVPPPPLSQAP 210
Score = 33.5 bits (73), Expect = 0.046
Identities = 20/69 (28%), Positives = 21/69 (30%)
Frame = +1
Query: 676 PPXPXXGPXXGGXXXXXXXXXKXXKPPPPPXXXGPPPPPGLKXXXRPPPPXXPPPXPPPX 855
P P G G K PP PP P + RPP P P PP
Sbjct: 96 PSMPALGGLFAGGMPKLRHIGKSSASAAPPSAPAPPTP---QSELRPPTSAPPRPSIPPP 152
Query: 856 PPPXXXPXP 882
P P P
Sbjct: 153 SPASAPPIP 161
Score = 26.6 bits (56), Expect = 5.3
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +2
Query: 812 APPPPXTPPXXPPXXPPPXXXPXPXP 889
APP P PP P PP P P
Sbjct: 143 APPRPSIPPPSPASAPPIPSKAPPIP 168
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 29.5 bits (63), Expect = 0.75
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +1
Query: 778 PPPPPGLKXXXRPPPPXXPPPXPPPXPP 861
P PP P P PPP PP PP
Sbjct: 221 PEIPPTYTPKQADPLPAPPPPPPPTLPP 248
Score = 28.7 bits (61), Expect = 1.3
Identities = 14/37 (37%), Positives = 14/37 (37%), Gaps = 3/37 (8%)
Frame = +1
Query: 760 PPXXXGPPP---PPGLKXXXRPPPPXXPPPXPPPXPP 861
P PPP PP P PP PPP PP
Sbjct: 161 PNSMVSPPPSFQPPSAAAPATSLPSDYNPPPPPPPPP 197
Score = 27.9 bits (59), Expect(2) = 0.006
Identities = 13/31 (41%), Positives = 13/31 (41%), Gaps = 3/31 (9%)
Frame = +1
Query: 757 PPPXXXGPP---PPPGLKXXXRPPPPXXPPP 840
PPP P P L PPPP PPP
Sbjct: 167 PPPSFQPPSAAAPATSLPSDYNPPPPPPPPP 197
Score = 27.5 bits (58), Expect(2) = 0.006
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +1
Query: 817 PPPXXPPPXPPPXPPPXXXP 876
P P P PPP PPP P
Sbjct: 229 PKQADPLPAPPPPPPPTLPP 248
Score = 26.2 bits (55), Expect = 7.0
Identities = 18/75 (24%), Positives = 19/75 (25%), Gaps = 1/75 (1%)
Frame = +2
Query: 668 PPXPPTPXXX-PGXGXXPXAPPPPXKXXNXXXXXXXXXXXXXRA*XXXXAPPPPXTPPXX 844
PP P P P PPPP + PP TP
Sbjct: 173 PPSAAAPATSLPSDYNPPPPPPPPPAVEDQAADANEPDDYYSSGRAVSPEIPPTYTPKQA 232
Query: 845 PPXXPPPXXXPXPXP 889
P PP P P
Sbjct: 233 DPLPAPPPPPPPTLP 247
>SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 379
Score = 31.5 bits (68), Expect = 0.19
Identities = 15/32 (46%), Positives = 15/32 (46%)
Frame = -3
Query: 851 GGGXGGGXXGGGGRXXXFRPGGGGGPXXXGGG 756
GGG GGG G GG GG G GGG
Sbjct: 136 GGGMGGGMGGMGGMDDDMDMDGGFGTRTRGGG 167
Score = 28.3 bits (60), Expect = 1.7
Identities = 14/28 (50%), Positives = 14/28 (50%), Gaps = 1/28 (3%)
Frame = -1
Query: 796 GPGGG-GGXPXXGGGGVXXFXRGGGGXG 716
GPG G GG P G GG F GG G
Sbjct: 84 GPGAGFGGFPGAGPGGARTFHFNMGGPG 111
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 31.1 bits (67), Expect = 0.25
Identities = 16/33 (48%), Positives = 16/33 (48%)
Frame = -3
Query: 851 GGGXGGGXXGGGGRXXXFRPGGGGGPXXXGGGG 753
GGG GG G GGR GG GG G GG
Sbjct: 446 GGGSRGGRGGFGGRGGFGGRGGFGGGRGRGRGG 478
Score = 26.2 bits (55), Expect = 7.0
Identities = 13/42 (30%), Positives = 15/42 (35%)
Frame = -1
Query: 703 PXXPXGGXGXXGXXXXKXGWGGXPGXGGXXVSXPGGGEEXXP 578
P G G G + G+GG G GG GG P
Sbjct: 443 PRTGGGSRGGRGGFGGRGGFGGRGGFGGGRGRGRGGARSGNP 484
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 30.3 bits (65), Expect = 0.43
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = +1
Query: 778 PPPPPGLKXXXRPPPPXXPPPXPPPXPPP 864
PPPPP + PP P PP PP
Sbjct: 1882 PPPPPPMALPKAGPPSAAPTSALPPAGPP 1910
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 30.3 bits (65), Expect = 0.43
Identities = 18/41 (43%), Positives = 18/41 (43%)
Frame = -3
Query: 875 GXXXGGGXGGGXGGGXXGGGGRXXXFRPGGGGGPXXXGGGG 753
G GG GG GG G GG R G GGG GGG
Sbjct: 136 GRGGRGGFRGGRGGSRGGFGGNS---RGGFGGGSRGGFGGG 173
Score = 28.7 bits (61), Expect = 1.3
Identities = 20/52 (38%), Positives = 20/52 (38%), Gaps = 4/52 (7%)
Frame = -3
Query: 881 GXGXXXGGGXG--GGXGGGXXG--GGGRXXXFRPGGGGGPXXXGGGGGLXXF 738
G G GG G GG GG G GGG F G GG GG F
Sbjct: 139 GRGGFRGGRGGSRGGFGGNSRGGFGGGSRGGFGGGSRGGSRGGFRGGSRGGF 190
Score = 26.6 bits (56), Expect = 5.3
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -3
Query: 848 GGXGGGXXGGGGRXXXFRPGG 786
GG GGG GG G F P G
Sbjct: 5 GGRGGGFRGGRGGSRPFTPSG 25
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 29.9 bits (64), Expect = 0.57
Identities = 17/43 (39%), Positives = 18/43 (41%), Gaps = 5/43 (11%)
Frame = +1
Query: 751 PPPP----PXXXGPPPPPGLKXXXR-PPPPXXPPPXPPPXPPP 864
PPPP P PPPP + PPPP P PPP
Sbjct: 208 PPPPMHHKPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 250
Score = 29.9 bits (64), Expect = 0.57
Identities = 17/43 (39%), Positives = 18/43 (41%), Gaps = 5/43 (11%)
Frame = +1
Query: 751 PPPP----PXXXGPPPPPGLKXXXR-PPPPXXPPPXPPPXPPP 864
PPPP P PPPP + PPPP P PPP
Sbjct: 221 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 263
Score = 29.9 bits (64), Expect = 0.57
Identities = 17/43 (39%), Positives = 18/43 (41%), Gaps = 5/43 (11%)
Frame = +1
Query: 751 PPPP----PXXXGPPPPPGLKXXXR-PPPPXXPPPXPPPXPPP 864
PPPP P PPPP + PPPP P PPP
Sbjct: 234 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 276
Score = 29.9 bits (64), Expect = 0.57
Identities = 17/43 (39%), Positives = 18/43 (41%), Gaps = 5/43 (11%)
Frame = +1
Query: 751 PPPP----PXXXGPPPPPGLKXXXR-PPPPXXPPPXPPPXPPP 864
PPPP P PPPP + PPPP P PPP
Sbjct: 247 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 289
Score = 29.9 bits (64), Expect = 0.57
Identities = 17/43 (39%), Positives = 18/43 (41%), Gaps = 5/43 (11%)
Frame = +1
Query: 751 PPPP----PXXXGPPPPPGLKXXXR-PPPPXXPPPXPPPXPPP 864
PPPP P PPPP + PPPP P PPP
Sbjct: 260 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 302
Score = 29.9 bits (64), Expect = 0.57
Identities = 17/43 (39%), Positives = 18/43 (41%), Gaps = 5/43 (11%)
Frame = +1
Query: 751 PPPP----PXXXGPPPPPGLKXXXR-PPPPXXPPPXPPPXPPP 864
PPPP P PPPP + PPPP P PPP
Sbjct: 273 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 315
Score = 29.9 bits (64), Expect = 0.57
Identities = 17/43 (39%), Positives = 18/43 (41%), Gaps = 5/43 (11%)
Frame = +1
Query: 751 PPPP----PXXXGPPPPPGLKXXXR-PPPPXXPPPXPPPXPPP 864
PPPP P PPPP + PPPP P PPP
Sbjct: 286 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 328
Score = 29.9 bits (64), Expect = 0.57
Identities = 17/43 (39%), Positives = 18/43 (41%), Gaps = 5/43 (11%)
Frame = +1
Query: 751 PPPP----PXXXGPPPPPGLKXXXR-PPPPXXPPPXPPPXPPP 864
PPPP P PPPP + PPPP P PPP
Sbjct: 299 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 341
Score = 27.1 bits (57), Expect = 4.0
Identities = 14/35 (40%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
Frame = +1
Query: 763 PXXXGPPPPPGLKXXXR-PPPPXXPPPXPPPXPPP 864
P PPPP K PPPP P PPP
Sbjct: 203 PGEHMPPPPMHHKPGEHMPPPPMHHEPGEHMPPPP 237
>SPCC645.07 |rgf1||RhoGEF for Rho1, Rgf1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1334
Score = 27.9 bits (59), Expect = 2.3
Identities = 14/39 (35%), Positives = 16/39 (41%), Gaps = 4/39 (10%)
Frame = +1
Query: 757 PPPXXXGPPPPPGLKXXXRPPP----PXXPPPXPPPXPP 861
P P P PPP + +P P PP PP PP
Sbjct: 42 PAPVSKKPLPPPTRRLPRKPLPFRSTSLQPPSSQPPAPP 80
Score = 26.2 bits (55), Expect = 7.0
Identities = 12/33 (36%), Positives = 13/33 (39%)
Frame = +1
Query: 748 KPPPPPXXXGPPPPPGLKXXXRPPPPXXPPPXP 846
KP PPP P P + PP PP P
Sbjct: 48 KPLPPPTRRLPRKPLPFRSTSLQPPSSQPPAPP 80
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 27.9 bits (59), Expect = 2.3
Identities = 14/38 (36%), Positives = 15/38 (39%)
Frame = +1
Query: 748 KPPPPPXXXGPPPPPGLKXXXRPPPPXXPPPXPPPXPP 861
KP P P P P +K PPPP P PP
Sbjct: 724 KPQVTPAPPTPAPTPAVKHH--PPPPPVRSSISPSMPP 759
Score = 25.8 bits (54), Expect = 9.3
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +2
Query: 671 PXPPTPXXXPGXGXXPXAPPPPXK 742
P PPTP P P PPPP +
Sbjct: 729 PAPPTPAPTPAVKHHP--PPPPVR 750
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 23.0 bits (47), Expect(2) = 3.6
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +1
Query: 838 PXPPPXPPP 864
P PPP PPP
Sbjct: 945 PPPPPPPPP 953
Score = 22.2 bits (45), Expect(2) = 3.6
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = +1
Query: 820 PPXXPPPXPPP 852
P PPP PPP
Sbjct: 942 PAFPPPPPPPP 952
>SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 331
Score = 26.6 bits (56), Expect = 5.3
Identities = 13/37 (35%), Positives = 14/37 (37%)
Frame = +1
Query: 748 KPPPPPXXXGPPPPPGLKXXXRPPPPXXPPPXPPPXP 858
+PP P P PG P P P P PP P
Sbjct: 106 EPPLPNEPVPEEPLPGEPPLPDEPVPEEPLPGEPPLP 142
>SPBC11B10.08 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 204
Score = 26.2 bits (55), Expect = 7.0
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = +2
Query: 815 PPPPXTPPXXPPXXPPP 865
PPPP PP PPP
Sbjct: 48 PPPPSVDHSAPPSGPPP 64
>SPBP8B7.16c |dbp2||ATP-dependent RNA helicase
Dbp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 550
Score = 26.2 bits (55), Expect = 7.0
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = -3
Query: 848 GGXGGGXXGGGGRXXXFRPGGGGGPXXXGGGG 753
GG GG GG FR GGG G G G
Sbjct: 508 GGRGGNYRRGGYGRGGFRRGGGYGNRNRGFTG 539
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 26.2 bits (55), Expect = 7.0
Identities = 15/39 (38%), Positives = 16/39 (41%), Gaps = 4/39 (10%)
Frame = +1
Query: 760 PPXXXGPPPP--PGLKXXXRPPPPXXPP--PXPPPXPPP 864
PP PP P PG+ PP PP PP P P
Sbjct: 500 PPGVPLPPIPGAPGMPNLNMSQPPMVPPGMALPPGMPAP 538
>SPBC1347.05c |||DNAJ domain protein Scj1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 381
Score = 25.8 bits (54), Expect = 9.3
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -3
Query: 860 GGXGGGXGGGXXGGG 816
GG GGG G G GGG
Sbjct: 81 GGPGGGPGEGFPGGG 95
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,164,683
Number of Sequences: 5004
Number of extensions: 38681
Number of successful extensions: 808
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 83
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 370
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 501293686
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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