Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP15_F_D16
         (977 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    27   1.1  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    25   3.4  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    24   8.0  

>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 26.6 bits (56), Expect = 1.1
 Identities = 12/22 (54%), Positives = 12/22 (54%), Gaps = 1/22 (4%)
 Frame = -3

Query: 462 GGGXGXXXPGGAXXX-GXPGPG 400
           GGG G   PGG     G PGPG
Sbjct: 204 GGGSGGGAPGGGGGSSGGPGPG 225


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 25.0 bits (52), Expect = 3.4
 Identities = 16/54 (29%), Positives = 16/54 (29%), Gaps = 1/54 (1%)
 Frame = -3

Query: 501 TGXPPXXPGRPXPGGGXGXXXPGG-AXXXGXPGPGXXPXXPXXXXXFXXPAFXG 343
           T  PP  PG   P G  G   P G     G PG       P        P   G
Sbjct: 147 TPGPPGYPGDVGPKGEPGPKGPAGHPGAPGRPGVDGVKGLPGLKGDIGAPGVIG 200


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 23.8 bits (49), Expect = 8.0
 Identities = 12/31 (38%), Positives = 12/31 (38%)
 Frame = -3

Query: 492 PPXXPGRPXPGGGXGXXXPGGAXXXGXPGPG 400
           P   PGR    G  G   P GA   G   PG
Sbjct: 381 PKGEPGRDGIPGQPGIAGPAGAPGGGEGRPG 411


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 215,727
Number of Sequences: 2352
Number of extensions: 1979
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 563,979
effective HSP length: 65
effective length of database: 411,099
effective search space used: 106885740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)