Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP15_F_D16
(977 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U94832-1|AAB53222.1| 711|Homo sapiens KSRP protein. 34 0.69
BC085004-1|AAH85004.1| 710|Homo sapiens KHSRP protein protein. 34 0.69
AF093747-1|AAD29861.1| 115|Homo sapiens KH type splicing regula... 34 0.69
M76729-1|AAA59993.1| 1838|Homo sapiens pro-alpha-1 type V collag... 33 2.1
D90279-1|BAA14323.1| 1838|Homo sapiens collagen alpha 1(V) chain... 33 2.1
BC008760-1|AAH08760.3| 591|Homo sapiens COL5A1 protein protein. 33 2.1
AL645768-1|CAI17261.1| 1838|Homo sapiens collagen type V alpha 1... 33 2.1
AL603650-2|CAI39859.1| 1838|Homo sapiens collagen type V alpha 1... 33 2.1
AL591890-1|CAI15483.1| 1838|Homo sapiens collagen type V alpha 1... 33 2.1
AL163302-2|CAB90482.1| 1519|Homo sapiens human type XVIII collag... 33 2.1
AF406780-1|AAN03620.1| 1626|Homo sapiens alpha 1 type XXII colla... 33 2.1
AB209864-1|BAD93101.1| 1792|Homo sapiens Pro-alpha-1 type V coll... 33 2.1
X70944-1|CAA50283.1| 707|Homo sapiens PTB-associated splicing f... 32 3.7
BC051192-1|AAH51192.1| 707|Homo sapiens splicing factor proline... 32 3.7
BC027708-1|AAH27708.1| 525|Homo sapiens SFPQ protein protein. 32 3.7
BC004534-1|AAH04534.2| 634|Homo sapiens SFPQ protein protein. 32 3.7
AL590434-2|CAI12467.1| 707|Homo sapiens splicing factor proline... 32 3.7
X05562-1|CAA29076.1| 1043|Homo sapiens protein ( Human mRNA for ... 31 4.8
U32169-3|AAC50215.1| 1629|Homo sapiens Pro-a2(XI) protein. 31 4.8
U32169-2|AAC50213.1| 1650|Homo sapiens Pro-a2(XI) protein. 31 4.8
U32169-1|AAC50214.1| 1736|Homo sapiens Pro-a2(XI) protein. 31 4.8
J04974-1|AAA52034.1| 961|Homo sapiens COL11A2 protein. 31 4.8
BX248309-1|CAM26005.1| 1622|Homo sapiens collagen, type XI, alph... 31 4.8
AL845446-3|CAI95551.1| 1650|Homo sapiens collagen, type XI, alph... 31 4.8
AL844527-6|CAI41834.1| 1650|Homo sapiens collagen, type XI, alph... 31 4.8
AL662824-16|CAI17611.2| 1650|Homo sapiens collagen, type XI, alp... 31 4.8
AL645940-2|CAI18063.2| 1650|Homo sapiens collagen type XI alpha ... 31 4.8
AL161773-3|CAH71366.2| 1712|Homo sapiens collagen type IV alpha ... 31 4.8
AL159153-1|CAH72050.2| 1712|Homo sapiens collagen type IV alpha ... 31 4.8
AL139385-2|CAI17005.2| 1712|Homo sapiens collagen type IV alpha ... 31 4.8
AL031228-16|CAA20240.1| 1736|Homo sapiens collagen type XI alpha... 31 4.8
AL031228-15|CAI95623.1| 1650|Homo sapiens collagen type XI alpha... 31 4.8
L41162-1|AAC41947.1| 684|Homo sapiens alpha-3 type IX collagen ... 31 6.4
BC011705-1|AAH11705.1| 684|Homo sapiens collagen, type IX, alph... 31 6.4
AL035669-10|CAC12750.1| 684|Homo sapiens collagen type IX alpha... 31 6.4
AF026802-1|AAD47357.1| 684|Homo sapiens alpha-3 type IX collage... 31 6.4
>U94832-1|AAB53222.1| 711|Homo sapiens KSRP protein.
Length = 711
Score = 34.3 bits (75), Expect = 0.69
Identities = 18/35 (51%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = -3
Query: 501 TGXPPXXPGRPXP-GGGXGXXXPGGAXXXGXPGPG 400
TG PP PG P P GGG G GG G PG G
Sbjct: 6 TGGPP--PGPPPPAGGGGGAGGAGGGPPPGPPGAG 38
>BC085004-1|AAH85004.1| 710|Homo sapiens KHSRP protein protein.
Length = 710
Score = 34.3 bits (75), Expect = 0.69
Identities = 18/35 (51%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = -3
Query: 501 TGXPPXXPGRPXP-GGGXGXXXPGGAXXXGXPGPG 400
TG PP PG P P GGG G GG G PG G
Sbjct: 6 TGGPP--PGPPPPAGGGGGAGGAGGGPPPGPPGAG 38
>AF093747-1|AAD29861.1| 115|Homo sapiens KH type splicing
regulatory protein protein.
Length = 115
Score = 34.3 bits (75), Expect = 0.69
Identities = 18/35 (51%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = -3
Query: 501 TGXPPXXPGRPXP-GGGXGXXXPGGAXXXGXPGPG 400
TG PP PG P P GGG G GG G PG G
Sbjct: 6 TGGPP--PGPPPPAGGGGGAGGAGGGPPPGPPGAG 38
>M76729-1|AAA59993.1| 1838|Homo sapiens pro-alpha-1 type V collagen
protein.
Length = 1838
Score = 32.7 bits (71), Expect = 2.1
Identities = 16/38 (42%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Frame = -3
Query: 492 PPXXPGRPXPGGGXGXXXP-GGAXXXGXPGPGXXPXXP 382
PP PG P P G G P G G PGP P P
Sbjct: 1532 PPGLPGPPGPKGAKGSSGPTGPKGEAGHPGPPGPPGPP 1569
>D90279-1|BAA14323.1| 1838|Homo sapiens collagen alpha 1(V) chain
precursor protein.
Length = 1838
Score = 32.7 bits (71), Expect = 2.1
Identities = 16/38 (42%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Frame = -3
Query: 492 PPXXPGRPXPGGGXGXXXP-GGAXXXGXPGPGXXPXXP 382
PP PG P P G G P G G PGP P P
Sbjct: 1532 PPGLPGPPGPKGAKGSSGPTGPRGEAGHPGPPGPPGPP 1569
>BC008760-1|AAH08760.3| 591|Homo sapiens COL5A1 protein protein.
Length = 591
Score = 32.7 bits (71), Expect = 2.1
Identities = 16/38 (42%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Frame = -3
Query: 492 PPXXPGRPXPGGGXGXXXP-GGAXXXGXPGPGXXPXXP 382
PP PG P P G G P G G PGP P P
Sbjct: 285 PPGLPGPPGPKGAKGSSGPTGPKGEAGHPGPPGPPGPP 322
>AL645768-1|CAI17261.1| 1838|Homo sapiens collagen type V alpha 1
protein.
Length = 1838
Score = 32.7 bits (71), Expect = 2.1
Identities = 16/38 (42%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Frame = -3
Query: 492 PPXXPGRPXPGGGXGXXXP-GGAXXXGXPGPGXXPXXP 382
PP PG P P G G P G G PGP P P
Sbjct: 1532 PPGLPGPPGPKGAKGSSGPTGPKGEAGHPGPPGPPGPP 1569
>AL603650-2|CAI39859.1| 1838|Homo sapiens collagen type V alpha 1
protein.
Length = 1838
Score = 32.7 bits (71), Expect = 2.1
Identities = 16/38 (42%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Frame = -3
Query: 492 PPXXPGRPXPGGGXGXXXP-GGAXXXGXPGPGXXPXXP 382
PP PG P P G G P G G PGP P P
Sbjct: 1532 PPGLPGPPGPKGAKGSSGPTGPKGEAGHPGPPGPPGPP 1569
>AL591890-1|CAI15483.1| 1838|Homo sapiens collagen type V alpha 1
protein.
Length = 1838
Score = 32.7 bits (71), Expect = 2.1
Identities = 16/38 (42%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Frame = -3
Query: 492 PPXXPGRPXPGGGXGXXXP-GGAXXXGXPGPGXXPXXP 382
PP PG P P G G P G G PGP P P
Sbjct: 1532 PPGLPGPPGPKGAKGSSGPTGPKGEAGHPGPPGPPGPP 1569
>AL163302-2|CAB90482.1| 1519|Homo sapiens human type XVIII collagen
protein.
Length = 1519
Score = 32.7 bits (71), Expect = 2.1
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = -3
Query: 492 PPXXPGRPXPGGGXGXXXPGGAXXXGXPGP 403
PP PG P P G G P G G PGP
Sbjct: 1120 PPGPPGPPGPRGYPGIPGPKGESIRGQPGP 1149
>AF406780-1|AAN03620.1| 1626|Homo sapiens alpha 1 type XXII collagen
protein.
Length = 1626
Score = 32.7 bits (71), Expect = 2.1
Identities = 15/30 (50%), Positives = 15/30 (50%)
Frame = -3
Query: 492 PPXXPGRPXPGGGXGXXXPGGAXXXGXPGP 403
PP PG P PGG G PG G PGP
Sbjct: 718 PPGVPGPPGPGGSPG--LPGEIGFPGKPGP 745
>AB209864-1|BAD93101.1| 1792|Homo sapiens Pro-alpha-1 type V collagen
variant protein.
Length = 1792
Score = 32.7 bits (71), Expect = 2.1
Identities = 16/38 (42%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Frame = -3
Query: 492 PPXXPGRPXPGGGXGXXXP-GGAXXXGXPGPGXXPXXP 382
PP PG P P G G P G G PGP P P
Sbjct: 1486 PPGLPGPPGPKGAKGSSGPTGPKGEAGHPGPPGPPGPP 1523
>X70944-1|CAA50283.1| 707|Homo sapiens PTB-associated splicing
factor protein.
Length = 707
Score = 31.9 bits (69), Expect = 3.7
Identities = 17/42 (40%), Positives = 17/42 (40%), Gaps = 3/42 (7%)
Frame = -3
Query: 498 GXPPXXPGRPXPGGGXGXXXPGGAXXXGXPG---PGXXPXXP 382
G P P PGG G PGG G PG PG P P
Sbjct: 193 GPGPGPKQGPGPGGPKGGKMPGGPKPGGGPGLSTPGGHPKPP 234
>BC051192-1|AAH51192.1| 707|Homo sapiens splicing factor
proline/glutamine-rich (polypyrimidine tract binding
protein as protein.
Length = 707
Score = 31.9 bits (69), Expect = 3.7
Identities = 17/42 (40%), Positives = 17/42 (40%), Gaps = 3/42 (7%)
Frame = -3
Query: 498 GXPPXXPGRPXPGGGXGXXXPGGAXXXGXPG---PGXXPXXP 382
G P P PGG G PGG G PG PG P P
Sbjct: 193 GPGPGPKQGPGPGGPKGGKMPGGPKPGGGPGLSTPGGHPKPP 234
>BC027708-1|AAH27708.1| 525|Homo sapiens SFPQ protein protein.
Length = 525
Score = 31.9 bits (69), Expect = 3.7
Identities = 17/42 (40%), Positives = 17/42 (40%), Gaps = 3/42 (7%)
Frame = -3
Query: 498 GXPPXXPGRPXPGGGXGXXXPGGAXXXGXPG---PGXXPXXP 382
G P P PGG G PGG G PG PG P P
Sbjct: 193 GPGPGPKQGPGPGGPKGGKMPGGPKPGGGPGLSTPGGHPKPP 234
>BC004534-1|AAH04534.2| 634|Homo sapiens SFPQ protein protein.
Length = 634
Score = 31.9 bits (69), Expect = 3.7
Identities = 17/42 (40%), Positives = 17/42 (40%), Gaps = 3/42 (7%)
Frame = -3
Query: 498 GXPPXXPGRPXPGGGXGXXXPGGAXXXGXPG---PGXXPXXP 382
G P P PGG G PGG G PG PG P P
Sbjct: 120 GPGPGPKQGPGPGGPKGGKMPGGPKPGGGPGLSTPGGHPKPP 161
>AL590434-2|CAI12467.1| 707|Homo sapiens splicing factor
proline/glutamine-rich (polypyrimidine tract binding
protein as protein.
Length = 707
Score = 31.9 bits (69), Expect = 3.7
Identities = 17/42 (40%), Positives = 17/42 (40%), Gaps = 3/42 (7%)
Frame = -3
Query: 498 GXPPXXPGRPXPGGGXGXXXPGGAXXXGXPG---PGXXPXXP 382
G P P PGG G PGG G PG PG P P
Sbjct: 193 GPGPGPKQGPGPGGPKGGKMPGGPKPGGGPGLSTPGGHPKPP 234
>X05562-1|CAA29076.1| 1043|Homo sapiens protein ( Human mRNA for
alpha-2 chain of collagen IV N-terminus. ).
Length = 1043
Score = 31.5 bits (68), Expect = 4.8
Identities = 19/61 (31%), Positives = 19/61 (31%), Gaps = 1/61 (1%)
Frame = -3
Query: 489 PXXPGRPXPGGGXGXXX-PGGAXXXGXPGPGXXPXXPXXXXXFXXPAFXGXXXGXXVAXF 313
P PG P P G G PG A G PGP P P F G
Sbjct: 689 PGLPGPPGPTGAKGLRGIPGFAGADGGPGPRGLPGDAGREGFPGPPGFIGPRGSKGAVGL 748
Query: 312 P 310
P
Sbjct: 749 P 749
>U32169-3|AAC50215.1| 1629|Homo sapiens Pro-a2(XI) protein.
Length = 1629
Score = 31.5 bits (68), Expect = 4.8
Identities = 16/40 (40%), Positives = 16/40 (40%), Gaps = 1/40 (2%)
Frame = -3
Query: 498 GXPPXXPGRPXPGGGXGXXXPGG-AXXXGXPGPGXXPXXP 382
G PP PG P G G PGG G GP P P
Sbjct: 1351 GGPPGLPGPAGPKGAKGATGPGGPKGEKGVQGPPGHPGPP 1390
>U32169-2|AAC50213.1| 1650|Homo sapiens Pro-a2(XI) protein.
Length = 1650
Score = 31.5 bits (68), Expect = 4.8
Identities = 16/40 (40%), Positives = 16/40 (40%), Gaps = 1/40 (2%)
Frame = -3
Query: 498 GXPPXXPGRPXPGGGXGXXXPGG-AXXXGXPGPGXXPXXP 382
G PP PG P G G PGG G GP P P
Sbjct: 1372 GGPPGLPGPAGPKGAKGATGPGGPKGEKGVQGPPGHPGPP 1411
>U32169-1|AAC50214.1| 1736|Homo sapiens Pro-a2(XI) protein.
Length = 1736
Score = 31.5 bits (68), Expect = 4.8
Identities = 16/40 (40%), Positives = 16/40 (40%), Gaps = 1/40 (2%)
Frame = -3
Query: 498 GXPPXXPGRPXPGGGXGXXXPGG-AXXXGXPGPGXXPXXP 382
G PP PG P G G PGG G GP P P
Sbjct: 1458 GGPPGLPGPAGPKGAKGATGPGGPKGEKGVQGPPGHPGPP 1497
>J04974-1|AAA52034.1| 961|Homo sapiens COL11A2 protein.
Length = 961
Score = 31.5 bits (68), Expect = 4.8
Identities = 16/40 (40%), Positives = 16/40 (40%), Gaps = 1/40 (2%)
Frame = -3
Query: 498 GXPPXXPGRPXPGGGXGXXXPGG-AXXXGXPGPGXXPXXP 382
G PP PG P G G PGG G GP P P
Sbjct: 729 GGPPGLPGPAGPKGAKGATGPGGPKGEKGVQGPPGHPGPP 768
>BX248309-1|CAM26005.1| 1622|Homo sapiens collagen, type XI, alpha 2
protein.
Length = 1622
Score = 31.5 bits (68), Expect = 4.8
Identities = 16/40 (40%), Positives = 16/40 (40%), Gaps = 1/40 (2%)
Frame = -3
Query: 498 GXPPXXPGRPXPGGGXGXXXPGG-AXXXGXPGPGXXPXXP 382
G PP PG P G G PGG G GP P P
Sbjct: 1344 GGPPGLPGPAGPKGAKGATGPGGPKGEKGVQGPPGHPGPP 1383
>AL845446-3|CAI95551.1| 1650|Homo sapiens collagen, type XI, alpha 2
protein.
Length = 1650
Score = 31.5 bits (68), Expect = 4.8
Identities = 16/40 (40%), Positives = 16/40 (40%), Gaps = 1/40 (2%)
Frame = -3
Query: 498 GXPPXXPGRPXPGGGXGXXXPGG-AXXXGXPGPGXXPXXP 382
G PP PG P G G PGG G GP P P
Sbjct: 1372 GGPPGLPGPAGPKGAKGATGPGGPKGEKGVQGPPGHPGPP 1411
>AL844527-6|CAI41834.1| 1650|Homo sapiens collagen, type XI, alpha 2
protein.
Length = 1650
Score = 31.5 bits (68), Expect = 4.8
Identities = 16/40 (40%), Positives = 16/40 (40%), Gaps = 1/40 (2%)
Frame = -3
Query: 498 GXPPXXPGRPXPGGGXGXXXPGG-AXXXGXPGPGXXPXXP 382
G PP PG P G G PGG G GP P P
Sbjct: 1372 GGPPGLPGPAGPKGAKGATGPGGPKGEKGVQGPPGHPGPP 1411
>AL662824-16|CAI17611.2| 1650|Homo sapiens collagen, type XI, alpha 2
protein.
Length = 1650
Score = 31.5 bits (68), Expect = 4.8
Identities = 16/40 (40%), Positives = 16/40 (40%), Gaps = 1/40 (2%)
Frame = -3
Query: 498 GXPPXXPGRPXPGGGXGXXXPGG-AXXXGXPGPGXXPXXP 382
G PP PG P G G PGG G GP P P
Sbjct: 1372 GGPPGLPGPAGPKGAKGATGPGGPKGEKGVQGPPGHPGPP 1411
>AL645940-2|CAI18063.2| 1650|Homo sapiens collagen type XI alpha 2
protein.
Length = 1650
Score = 31.5 bits (68), Expect = 4.8
Identities = 16/40 (40%), Positives = 16/40 (40%), Gaps = 1/40 (2%)
Frame = -3
Query: 498 GXPPXXPGRPXPGGGXGXXXPGG-AXXXGXPGPGXXPXXP 382
G PP PG P G G PGG G GP P P
Sbjct: 1372 GGPPGLPGPAGPKGAKGATGPGGPKGEKGVQGPPGHPGPP 1411
>AL161773-3|CAH71366.2| 1712|Homo sapiens collagen type IV alpha 2
protein.
Length = 1712
Score = 31.5 bits (68), Expect = 4.8
Identities = 19/61 (31%), Positives = 19/61 (31%), Gaps = 1/61 (1%)
Frame = -3
Query: 489 PXXPGRPXPGGGXGXXX-PGGAXXXGXPGPGXXPXXPXXXXXFXXPAFXGXXXGXXVAXF 313
P PG P P G G PG A G PGP P P F G
Sbjct: 689 PGLPGPPGPTGAKGLRGIPGFAGADGGPGPRGLPGDAGREGFPGPPGFIGPRGSKGAVGL 748
Query: 312 P 310
P
Sbjct: 749 P 749
>AL159153-1|CAH72050.2| 1712|Homo sapiens collagen type IV alpha 2
protein.
Length = 1712
Score = 31.5 bits (68), Expect = 4.8
Identities = 19/61 (31%), Positives = 19/61 (31%), Gaps = 1/61 (1%)
Frame = -3
Query: 489 PXXPGRPXPGGGXGXXX-PGGAXXXGXPGPGXXPXXPXXXXXFXXPAFXGXXXGXXVAXF 313
P PG P P G G PG A G PGP P P F G
Sbjct: 689 PGLPGPPGPTGAKGLRGIPGFAGADGGPGPRGLPGDAGREGFPGPPGFIGPRGSKGAVGL 748
Query: 312 P 310
P
Sbjct: 749 P 749
>AL139385-2|CAI17005.2| 1712|Homo sapiens collagen type IV alpha 2
protein.
Length = 1712
Score = 31.5 bits (68), Expect = 4.8
Identities = 19/61 (31%), Positives = 19/61 (31%), Gaps = 1/61 (1%)
Frame = -3
Query: 489 PXXPGRPXPGGGXGXXX-PGGAXXXGXPGPGXXPXXPXXXXXFXXPAFXGXXXGXXVAXF 313
P PG P P G G PG A G PGP P P F G
Sbjct: 689 PGLPGPPGPTGAKGLRGIPGFAGADGGPGPRGLPGDAGREGFPGPPGFIGPRGSKGAVGL 748
Query: 312 P 310
P
Sbjct: 749 P 749
>AL031228-16|CAA20240.1| 1736|Homo sapiens collagen type XI alpha 2
protein.
Length = 1736
Score = 31.5 bits (68), Expect = 4.8
Identities = 16/40 (40%), Positives = 16/40 (40%), Gaps = 1/40 (2%)
Frame = -3
Query: 498 GXPPXXPGRPXPGGGXGXXXPGG-AXXXGXPGPGXXPXXP 382
G PP PG P G G PGG G GP P P
Sbjct: 1458 GGPPGLPGPAGPKGAKGATGPGGPKGEKGVQGPPGHPGPP 1497
>AL031228-15|CAI95623.1| 1650|Homo sapiens collagen type XI alpha 2
protein.
Length = 1650
Score = 31.5 bits (68), Expect = 4.8
Identities = 16/40 (40%), Positives = 16/40 (40%), Gaps = 1/40 (2%)
Frame = -3
Query: 498 GXPPXXPGRPXPGGGXGXXXPGG-AXXXGXPGPGXXPXXP 382
G PP PG P G G PGG G GP P P
Sbjct: 1372 GGPPGLPGPAGPKGAKGATGPGGPKGEKGVQGPPGHPGPP 1411
>L41162-1|AAC41947.1| 684|Homo sapiens alpha-3 type IX collagen
protein.
Length = 684
Score = 31.1 bits (67), Expect = 6.4
Identities = 17/50 (34%), Positives = 18/50 (36%)
Frame = -3
Query: 492 PPXXPGRPXPGGGXGXXXPGGAXXXGXPGPGXXPXXPXXXXXFXXPAFXG 343
PP PG+P G G P G G PGP P P P G
Sbjct: 36 PPGRPGKPGQDGIDGEAGPPG--LPGPPGPKGAPGKPGKPGEAGLPGLPG 83
>BC011705-1|AAH11705.1| 684|Homo sapiens collagen, type IX, alpha 3
protein.
Length = 684
Score = 31.1 bits (67), Expect = 6.4
Identities = 17/50 (34%), Positives = 18/50 (36%)
Frame = -3
Query: 492 PPXXPGRPXPGGGXGXXXPGGAXXXGXPGPGXXPXXPXXXXXFXXPAFXG 343
PP PG+P G G P G G PGP P P P G
Sbjct: 36 PPGPPGKPGQDGIDGEAGPPG--LPGPPGPKGAPGKPGKPGEAGLPGLPG 83
>AL035669-10|CAC12750.1| 684|Homo sapiens collagen type IX alpha 3
protein.
Length = 684
Score = 31.1 bits (67), Expect = 6.4
Identities = 17/50 (34%), Positives = 18/50 (36%)
Frame = -3
Query: 492 PPXXPGRPXPGGGXGXXXPGGAXXXGXPGPGXXPXXPXXXXXFXXPAFXG 343
PP PG+P G G P G G PGP P P P G
Sbjct: 36 PPGPPGKPGQDGIDGEAGPPG--LPGPPGPKGAPGKPGKPGEAGLPGLPG 83
>AF026802-1|AAD47357.1| 684|Homo sapiens alpha-3 type IX collagen
protein.
Length = 684
Score = 31.1 bits (67), Expect = 6.4
Identities = 17/50 (34%), Positives = 18/50 (36%)
Frame = -3
Query: 492 PPXXPGRPXPGGGXGXXXPGGAXXXGXPGPGXXPXXPXXXXXFXXPAFXG 343
PP PG+P G G P G G PGP P P P G
Sbjct: 36 PPGPPGKPGQDGIDGEAGPPG--LPGPPGPKGAPGKPGKPGEAGLPGLPG 83
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,746,831
Number of Sequences: 237096
Number of extensions: 587184
Number of successful extensions: 6192
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 1917
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5690
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 13047299170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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