Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP15_F_D16
(977 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z35719-1|CAA84800.1| 296|Caenorhabditis elegans Hypothetical pr... 33 0.23
AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen pro... 33 0.31
Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical pr... 33 0.41
Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical pr... 33 0.41
AC024811-5|AAF60775.1| 285|Caenorhabditis elegans Collagen prot... 33 0.41
Z70756-4|CAA94788.1| 290|Caenorhabditis elegans Hypothetical pr... 32 0.54
U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter... 32 0.54
AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen prot... 32 0.54
Z70756-6|CAA94792.1| 290|Caenorhabditis elegans Hypothetical pr... 32 0.71
Z79694-6|CAB01958.1| 316|Caenorhabditis elegans Hypothetical pr... 31 0.94
Z79694-5|CAB01961.1| 316|Caenorhabditis elegans Hypothetical pr... 31 0.94
AF040646-1|AAK31537.1| 530|Caenorhabditis elegans Collagen prot... 31 0.94
Z81503-1|CAB04111.1| 305|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z73972-2|CAA98258.1| 316|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z73972-1|CAA98257.1| 316|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z46791-4|CAA86758.1| 317|Caenorhabditis elegans Hypothetical pr... 31 1.2
X51623-1|CAA35955.1| 316|Caenorhabditis elegans collagen protein. 31 1.2
X51622-1|CAA35954.1| 316|Caenorhabditis elegans collagen protein. 31 1.2
U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protei... 31 1.2
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 31 1.2
Z78064-2|CAB01508.2| 317|Caenorhabditis elegans Hypothetical pr... 31 1.6
Z78064-1|CAB01509.1| 313|Caenorhabditis elegans Hypothetical pr... 31 1.6
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 31 1.6
U80451-8|AAB37842.2| 288|Caenorhabditis elegans Collagen protei... 31 1.6
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 31 1.6
AF022985-12|AAB69959.1| 319|Caenorhabditis elegans Collagen pro... 31 1.6
Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical pr... 30 2.2
Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen... 30 2.2
Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen... 30 2.2
U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein ... 30 2.2
U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein ... 30 2.2
U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV) coll... 30 2.2
AL032627-19|CAD66222.1| 309|Caenorhabditis elegans Hypothetical... 30 2.2
AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical ... 30 2.2
AL132952-24|CAB61143.2| 351|Caenorhabditis elegans Hypothetical... 30 2.9
AF022985-9|AAB69960.1| 314|Caenorhabditis elegans Collagen prot... 30 2.9
AC024775-6|AAK68452.2| 304|Caenorhabditis elegans Collagen prot... 30 2.9
U61948-2|AAB03143.2| 345|Caenorhabditis elegans Collagen protei... 29 3.8
U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protei... 29 3.8
U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protei... 29 3.8
M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen ... 29 3.8
M25480-1|AAA27986.1| 326|Caenorhabditis elegans collagen protein. 29 3.8
AL032627-21|CAD66221.1| 289|Caenorhabditis elegans Hypothetical... 29 3.8
AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular col... 29 3.8
AC024805-16|AAK39336.1| 448|Caenorhabditis elegans Hypothetical... 29 3.8
AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen prot... 29 3.8
Z81143-1|CAB03513.1| 381|Caenorhabditis elegans Hypothetical pr... 29 5.0
Z74036-2|CAA98487.1| 266|Caenorhabditis elegans Hypothetical pr... 29 5.0
Z74036-1|CAA98486.1| 299|Caenorhabditis elegans Hypothetical pr... 29 5.0
Z68507-1|CAA92826.1| 337|Caenorhabditis elegans Hypothetical pr... 29 5.0
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 29 5.0
Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical pr... 29 5.0
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 29 5.0
U55366-4|AAA97982.1| 310|Caenorhabditis elegans Collagen protei... 29 5.0
U41553-3|AAA83293.1| 289|Caenorhabditis elegans Collagen protei... 29 5.0
M25481-1|AAA27987.1| 283|Caenorhabditis elegans collagen protein. 29 5.0
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 29 5.0
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 29 5.0
AF000198-7|AAB53052.1| 418|Caenorhabditis elegans Collagen prot... 29 5.0
Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical pr... 29 6.7
Z74042-8|CAA98525.1| 299|Caenorhabditis elegans Hypothetical pr... 29 6.7
Z71178-1|CAA94874.1| 297|Caenorhabditis elegans Hypothetical pr... 29 6.7
V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein ( Caeno... 29 6.7
U55373-5|AAC25888.1| 289|Caenorhabditis elegans Collagen protei... 29 6.7
U55373-4|ABR92605.1| 210|Caenorhabditis elegans Collagen protei... 29 6.7
J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein ( C.ele... 29 6.7
Z81525-6|CAB82206.2| 346|Caenorhabditis elegans Hypothetical pr... 28 8.8
Z81479-3|CAB03942.1| 283|Caenorhabditis elegans Hypothetical pr... 28 8.8
Z81479-2|CAB03941.1| 283|Caenorhabditis elegans Hypothetical pr... 28 8.8
Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical pr... 28 8.8
Z70208-1|CAA94141.1| 339|Caenorhabditis elegans Hypothetical pr... 28 8.8
Z46791-3|CAA86757.1| 323|Caenorhabditis elegans Hypothetical pr... 28 8.8
AF047656-13|AAC05105.1| 313|Caenorhabditis elegans Collagen pro... 28 8.8
>Z35719-1|CAA84800.1| 296|Caenorhabditis elegans Hypothetical
protein F17C8.2 protein.
Length = 296
Score = 33.5 bits (73), Expect = 0.23
Identities = 15/34 (44%), Positives = 15/34 (44%)
Frame = -3
Query: 492 PPXXPGRPXPGGGXGXXXPGGAXXXGXPGPGXXP 391
P PG P G G PG A G PGPG P
Sbjct: 199 PNGEPGAPGKDGEKGKGEPGPAGPPGPPGPGGPP 232
Score = 31.9 bits (69), Expect = 0.71
Identities = 16/34 (47%), Positives = 16/34 (47%)
Frame = -3
Query: 492 PPXXPGRPXPGGGXGXXXPGGAXXXGXPGPGXXP 391
P PG P PGG G GGA G PGP P
Sbjct: 219 PAGPPGPPGPGGPPGDA--GGAGSDGAPGPQGPP 250
>AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen
protein 142 protein.
Length = 325
Score = 33.1 bits (72), Expect = 0.31
Identities = 14/36 (38%), Positives = 15/36 (41%)
Frame = -3
Query: 489 PXXPGRPXPGGGXGXXXPGGAXXXGXPGPGXXPXXP 382
P PG P GG PG + G PGP P P
Sbjct: 187 PGSPGNPGRGGQRSRGLPGPSGRPGPPGPAGGPGQP 222
Score = 31.5 bits (68), Expect = 0.94
Identities = 15/34 (44%), Positives = 16/34 (47%)
Frame = -3
Query: 492 PPXXPGRPXPGGGXGXXXPGGAXXXGXPGPGXXP 391
P PG P P GG G PG + G PGP P
Sbjct: 206 PSGRPGPPGPAGGPGQ--PGHSGGAGSPGPQGPP 237
Score = 30.3 bits (65), Expect = 2.2
Identities = 13/33 (39%), Positives = 14/33 (42%)
Frame = -3
Query: 480 PGRPXPGGGXGXXXPGGAXXXGXPGPGXXPXXP 382
PG+P G G GG G PGP P P
Sbjct: 181 PGQPGHPGSPGNPGRGGQRSRGLPGPSGRPGPP 213
>Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical
protein H06A10.2 protein.
Length = 305
Score = 32.7 bits (71), Expect = 0.41
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = -3
Query: 492 PPXXPGRPXPGGGXGXXXPGGAXXXGXPGPGXXP 391
PP G P P G PG A G PGP P
Sbjct: 230 PPGPAGPPGPDGASPTAAPGAAGPPGPPGPAGAP 263
>Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical
protein F54B11.2 protein.
Length = 304
Score = 32.7 bits (71), Expect = 0.41
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = -3
Query: 492 PPXXPGRPXPGGGXGXXXPGGAXXXGXPGPGXXP 391
PP G P P G PG A G PGP P
Sbjct: 229 PPGPAGPPGPDGASPTAAPGAAGPPGPPGPAGAP 262
>AC024811-5|AAF60775.1| 285|Caenorhabditis elegans Collagen protein
48 protein.
Length = 285
Score = 32.7 bits (71), Expect = 0.41
Identities = 19/60 (31%), Positives = 20/60 (33%)
Frame = -3
Query: 489 PXXPGRPXPGGGXGXXXPGGAXXXGXPGPGXXPXXPXXXXXFXXPAFXGXXXGXXVAXFP 310
P PG+ P G G PGG G GP P P P G VA P
Sbjct: 187 PGQPGQRGPPGEPGALLPGGDAPPGPSGPPGRPGAPGQPGKAGSPGQDGSNGDAGVAGEP 246
>Z70756-4|CAA94788.1| 290|Caenorhabditis elegans Hypothetical
protein T06E4.4 protein.
Length = 290
Score = 32.3 bits (70), Expect = 0.54
Identities = 18/53 (33%), Positives = 19/53 (35%)
Frame = -3
Query: 501 TGXPPXXPGRPXPGGGXGXXXPGGAXXXGXPGPGXXPXXPXXXXXFXXPAFXG 343
T P PG P GG G PG + G PGP P P P G
Sbjct: 200 TPGPSGAPGPQGPAGGPGQ--PGQSGGAGAPGPAGAPGAPGGPGNAGTPGTPG 250
Score = 29.9 bits (64), Expect = 2.9
Identities = 13/36 (36%), Positives = 14/36 (38%)
Frame = -3
Query: 489 PXXPGRPXPGGGXGXXXPGGAXXXGXPGPGXXPXXP 382
P PG P GG PG + G GP P P
Sbjct: 184 PGHPGAPGQGGQRSRGTPGPSGAPGPQGPAGGPGQP 219
Score = 29.1 bits (62), Expect = 5.0
Identities = 15/38 (39%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Frame = -3
Query: 492 PPXXPGRPXPGGGXGXXXP-GGAXXXGXPGPGXXPXXP 382
P PG+ GGG G P G A G PG P P
Sbjct: 150 PSGAPGQDAVGGGPGPAGPQGPAGDAGAPGQAGAPGHP 187
>U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 3 protein.
Length = 302
Score = 32.3 bits (70), Expect = 0.54
Identities = 24/82 (29%), Positives = 25/82 (30%), Gaps = 1/82 (1%)
Frame = -3
Query: 498 GXPPXXPGRPXPGGGXGXXXPGGA-XXXGXPGPGXXPXXPXXXXXFXXPAFXGXXXGXXV 322
G PP PG P P G G P G G GP P P P G
Sbjct: 221 GAPPGPPGPPGPPGPQGPPGPPGKDGQPGKAGPPGLPGDPGEKGSDGLPGPHGGTGPRGP 280
Query: 321 AXFPRAXFXXPXXRCGSAPXRR 256
P + P R G RR
Sbjct: 281 PGQPGSCDHCPPPRTGPGYARR 302
>AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen protein
103 protein.
Length = 371
Score = 32.3 bits (70), Expect = 0.54
Identities = 14/36 (38%), Positives = 15/36 (41%)
Frame = -3
Query: 489 PXXPGRPXPGGGXGXXXPGGAXXXGXPGPGXXPXXP 382
P PG P G G GG+ G PGP P P
Sbjct: 232 PGQPGAPGQPGRPGKNAQGGSSRPGPPGPAGPPGPP 267
Score = 30.3 bits (65), Expect = 2.2
Identities = 15/38 (39%), Positives = 15/38 (39%), Gaps = 1/38 (2%)
Frame = -3
Query: 492 PPXXPGRPXPGGGXGXXXPG-GAXXXGXPGPGXXPXXP 382
PP G P P G G G G G PGP P P
Sbjct: 257 PPGPAGPPGPPGNNGAPGGGYGVGPPGPPGPSGRPGAP 294
Score = 30.3 bits (65), Expect = 2.2
Identities = 16/33 (48%), Positives = 16/33 (48%), Gaps = 2/33 (6%)
Frame = -3
Query: 492 PPXXPGRPX-PGGGXGXXXPGGAXXXGXPG-PG 400
PP PG PGGG G PG G PG PG
Sbjct: 263 PPGPPGNNGAPGGGYGVGPPGPPGPSGRPGAPG 295
Score = 28.3 bits (60), Expect = 8.8
Identities = 15/34 (44%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Frame = -3
Query: 480 PGRPXPGGGXGXXX-PGGAXXXGXPGPGXXPXXP 382
PG P GGG G PG A G PG P P
Sbjct: 208 PGAPSFGGGVGAPGAPGPAGDAGSPGQPGAPGQP 241
>Z70756-6|CAA94792.1| 290|Caenorhabditis elegans Hypothetical
protein T06E4.6 protein.
Length = 290
Score = 31.9 bits (69), Expect = 0.71
Identities = 16/40 (40%), Positives = 17/40 (42%)
Frame = -3
Query: 501 TGXPPXXPGRPXPGGGXGXXXPGGAXXXGXPGPGXXPXXP 382
T P PG P GG G PG + G PGP P P
Sbjct: 200 TPGPAGAPGPQGPAGGPGQ--PGQSGGAGAPGPAGAPGAP 237
Score = 31.1 bits (67), Expect = 1.2
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = -3
Query: 489 PXXPGRPXPGGGXGXXXPGGAXXXGXPGPGXXPXXP 382
P PG P GG PG A G GP P P
Sbjct: 184 PGHPGAPGQGGQRSRGTPGPAGAPGPQGPAGGPGQP 219
Score = 28.3 bits (60), Expect = 8.8
Identities = 15/32 (46%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Frame = -3
Query: 492 PPXXPGRPXPGGGXGXXXPGGAXXXGXP-GPG 400
P PG+P GG G P GA G P GPG
Sbjct: 212 PAGGPGQPGQSGGAGAPGPAGA--PGAPGGPG 241
>Z79694-6|CAB01958.1| 316|Caenorhabditis elegans Hypothetical
protein C15A11.6 protein.
Length = 316
Score = 31.5 bits (68), Expect = 0.94
Identities = 16/38 (42%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Frame = -3
Query: 492 PPXXPGRPXPGGGXG-XXXPGGAXXXGXPGPGXXPXXP 382
P PG P GGG G PG A G PG P P
Sbjct: 155 PNGNPGAPAQGGGQGPPGPPGPAGSAGSPGQAGAPGNP 192
Score = 29.1 bits (62), Expect = 5.0
Identities = 13/36 (36%), Positives = 14/36 (38%)
Frame = -3
Query: 489 PXXPGRPXPGGGXGXXXPGGAXXXGXPGPGXXPXXP 382
P PG P G G PG + G GP P P
Sbjct: 189 PGNPGSPGKSGQRGRGLPGPSGAPGSQGPPGAPGQP 224
Score = 28.3 bits (60), Expect = 8.8
Identities = 15/33 (45%), Positives = 16/33 (48%), Gaps = 2/33 (6%)
Frame = -3
Query: 492 PPXXPGRPXPGGGXG-XXXPGGAXXXGXPG-PG 400
PP PG+P G G PG A G PG PG
Sbjct: 217 PPGAPGQPGSGNAPGPAGPPGPAGPNGQPGHPG 249
>Z79694-5|CAB01961.1| 316|Caenorhabditis elegans Hypothetical
protein C15A11.5 protein.
Length = 316
Score = 31.5 bits (68), Expect = 0.94
Identities = 16/38 (42%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Frame = -3
Query: 492 PPXXPGRPXPGGGXG-XXXPGGAXXXGXPGPGXXPXXP 382
P PG P GGG G PG A G PG P P
Sbjct: 155 PNGNPGAPAQGGGQGPPGPPGPAGSAGSPGQAGAPGNP 192
Score = 29.1 bits (62), Expect = 5.0
Identities = 13/36 (36%), Positives = 14/36 (38%)
Frame = -3
Query: 489 PXXPGRPXPGGGXGXXXPGGAXXXGXPGPGXXPXXP 382
P PG P G G PG + G GP P P
Sbjct: 189 PGNPGSPGKSGQRGRGLPGPSGAPGPQGPPGAPGQP 224
Score = 28.3 bits (60), Expect = 8.8
Identities = 15/33 (45%), Positives = 16/33 (48%), Gaps = 2/33 (6%)
Frame = -3
Query: 492 PPXXPGRPXPGGGXG-XXXPGGAXXXGXPG-PG 400
PP PG+P G G PG A G PG PG
Sbjct: 217 PPGAPGQPGSGNAPGPAGPPGPAGPNGQPGHPG 249
>AF040646-1|AAK31537.1| 530|Caenorhabditis elegans Collagen protein
70 protein.
Length = 530
Score = 31.5 bits (68), Expect = 0.94
Identities = 17/35 (48%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Frame = -3
Query: 489 PXXPGRPX-PGGGXGXXXPGGAXXXGXPG-PGXXP 391
P PG P PGG G PGG G PG PG P
Sbjct: 118 PGTPGGPGNPGGLGGPGNPGGPGTPGGPGTPGGQP 152
>Z81503-1|CAB04111.1| 305|Caenorhabditis elegans Hypothetical
protein F14F7.1 protein.
Length = 305
Score = 31.1 bits (67), Expect = 1.2
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = -3
Query: 489 PXXPGRPXPGGGXGXXXPGGAXXXGXPGPGXXP 391
P PG G G G PG A G PGP P
Sbjct: 206 PGQPGNDAHGYGGGVGAPGPAGPRGAPGPAGHP 238
Score = 29.9 bits (64), Expect = 2.9
Identities = 15/32 (46%), Positives = 15/32 (46%), Gaps = 2/32 (6%)
Frame = -3
Query: 492 PPXXPGRPXPGGGXGXXXPGG--AXXXGXPGP 403
PP PGRP G G GG A G PGP
Sbjct: 159 PPGPPGRPGSDGQPGRPATGGGAAPRPGPPGP 190
>Z73972-2|CAA98258.1| 316|Caenorhabditis elegans Hypothetical
protein F15H10.2 protein.
Length = 316
Score = 31.1 bits (67), Expect = 1.2
Identities = 13/33 (39%), Positives = 14/33 (42%)
Frame = -3
Query: 501 TGXPPXXPGRPXPGGGXGXXXPGGAXXXGXPGP 403
T P PG P P G G G+ G PGP
Sbjct: 241 TPGPAGPPGSPGPAGAPGQPGQAGSSQPGGPGP 273
Score = 29.1 bits (62), Expect = 5.0
Identities = 14/35 (40%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Frame = -3
Query: 492 PPXXPGRPXPGGGXG-XXXPGGAXXXGXPGPGXXP 391
P PG+ P G G GGA G PGP P
Sbjct: 180 PSGAPGQKGPSGAPGAPGQSGGAALPGPPGPAGPP 214
>Z73972-1|CAA98257.1| 316|Caenorhabditis elegans Hypothetical
protein F15H10.1 protein.
Length = 316
Score = 31.1 bits (67), Expect = 1.2
Identities = 13/33 (39%), Positives = 14/33 (42%)
Frame = -3
Query: 501 TGXPPXXPGRPXPGGGXGXXXPGGAXXXGXPGP 403
T P PG P P G G G+ G PGP
Sbjct: 241 TPGPAGPPGSPGPAGAPGQPGQAGSSQPGGPGP 273
Score = 29.1 bits (62), Expect = 5.0
Identities = 14/35 (40%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Frame = -3
Query: 492 PPXXPGRPXPGGGXG-XXXPGGAXXXGXPGPGXXP 391
P PG+ P G G GGA G PGP P
Sbjct: 180 PSGAPGQKGPSGAPGAPGQSGGAALPGPPGPAGPP 214
>Z46791-4|CAA86758.1| 317|Caenorhabditis elegans Hypothetical
protein C09G5.5 protein.
Length = 317
Score = 31.1 bits (67), Expect = 1.2
Identities = 16/38 (42%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Frame = -3
Query: 492 PPXXPGRPXPGGGXG-XXXPGGAXXXGXPGPGXXPXXP 382
P PG P GGG G PG A G PG P P
Sbjct: 153 PNGNPGAPAHGGGQGPPGPPGPAGDAGSPGQAGAPGNP 190
Score = 29.9 bits (64), Expect = 2.9
Identities = 15/37 (40%), Positives = 16/37 (43%)
Frame = -3
Query: 492 PPXXPGRPXPGGGXGXXXPGGAXXXGXPGPGXXPXXP 382
PP PG+P G PG A G PGP P P
Sbjct: 215 PPGAPGQPGSGS-----TPGPAGPPGPPGPNGQPGHP 246
Score = 29.1 bits (62), Expect = 5.0
Identities = 13/36 (36%), Positives = 14/36 (38%)
Frame = -3
Query: 489 PXXPGRPXPGGGXGXXXPGGAXXXGXPGPGXXPXXP 382
P PGRP G PG + G GP P P
Sbjct: 187 PGNPGRPGQSGQRSRGLPGPSGRPGPQGPPGAPGQP 222
>X51623-1|CAA35955.1| 316|Caenorhabditis elegans collagen protein.
Length = 316
Score = 31.1 bits (67), Expect = 1.2
Identities = 13/33 (39%), Positives = 14/33 (42%)
Frame = -3
Query: 501 TGXPPXXPGRPXPGGGXGXXXPGGAXXXGXPGP 403
T P PG P P G G G+ G PGP
Sbjct: 241 TPGPAGPPGSPGPAGAPGQPGQAGSSQPGGPGP 273
Score = 29.1 bits (62), Expect = 5.0
Identities = 14/35 (40%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Frame = -3
Query: 492 PPXXPGRPXPGGGXG-XXXPGGAXXXGXPGPGXXP 391
P PG+ P G G GGA G PGP P
Sbjct: 180 PSGAPGQKGPSGAPGAPGQSGGAALPGPPGPAGPP 214
>X51622-1|CAA35954.1| 316|Caenorhabditis elegans collagen protein.
Length = 316
Score = 31.1 bits (67), Expect = 1.2
Identities = 13/33 (39%), Positives = 14/33 (42%)
Frame = -3
Query: 501 TGXPPXXPGRPXPGGGXGXXXPGGAXXXGXPGP 403
T P PG P P G G G+ G PGP
Sbjct: 241 TPGPAGPPGSPGPAGAPGQPGQAGSSQPGGPGP 273
Score = 29.1 bits (62), Expect = 5.0
Identities = 14/35 (40%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Frame = -3
Query: 492 PPXXPGRPXPGGGXG-XXXPGGAXXXGXPGPGXXP 391
P PG+ P G G GGA G PGP P
Sbjct: 180 PSGAPGQKGPSGAPGAPGQSGGAALPGPPGPAGPP 214
>U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protein
33 protein.
Length = 304
Score = 31.1 bits (67), Expect = 1.2
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = -3
Query: 492 PPXXPGRPXPGGGXGXXXPGGAXXXGXPGPGXXPXXP 382
PP PG P G G P G PGP P P
Sbjct: 196 PPGSPGAPGEPGRPGDDAPSEPLIPGEPGPQGPPGPP 232
Score = 30.3 bits (65), Expect = 2.2
Identities = 17/44 (38%), Positives = 17/44 (38%), Gaps = 7/44 (15%)
Frame = -3
Query: 492 PPXXPGRPX-------PGGGXGXXXPGGAXXXGXPGPGXXPXXP 382
PP PG P PG G PG A G PGP P P
Sbjct: 160 PPGPPGAPGDAGTNGAPGAPGGDAPPGEAGPKGPPGPPGSPGAP 203
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 31.1 bits (67), Expect = 1.2
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = -3
Query: 492 PPXXPGRPXPGGGXGXXXPGGAXXXGXPGPGXXPXXP 382
PP PG P G G PG G PG P P
Sbjct: 256 PPGPPGPPGQDGSGGAAQPGPPGPPGPPGNDGQPGGP 292
Score = 30.3 bits (65), Expect = 2.2
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = -3
Query: 489 PXXPGRPXPGGGXGXXXPGGAXXXGXPGPGXXP 391
P G P P G G GGA G PGP P
Sbjct: 251 PGPAGPPGPPGPPGQDGSGGAAQPGPPGPPGPP 283
Score = 28.3 bits (60), Expect = 8.8
Identities = 15/32 (46%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
Frame = -3
Query: 492 PPXXPGRPXPGGGXGXXXPGGAXXXGXPG-PG 400
PP PG P P G G PG G PG PG
Sbjct: 212 PPGPPGPPGPPGNDG--QPGAPGQDGQPGAPG 241
Score = 28.3 bits (60), Expect = 8.8
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = -3
Query: 489 PXXPGRPXPGGGXGXXXPGGAXXXGXPGPGXXP 391
P PG P P G G PGG G PG P
Sbjct: 274 PGPPGPPGPPGNDGQ--PGGPGQPGGPGQDGGP 304
>Z78064-2|CAB01508.2| 317|Caenorhabditis elegans Hypothetical
protein F57B1.4 protein.
Length = 317
Score = 30.7 bits (66), Expect = 1.6
Identities = 13/33 (39%), Positives = 14/33 (42%)
Frame = -3
Query: 501 TGXPPXXPGRPXPGGGXGXXXPGGAXXXGXPGP 403
T P PG P P G G G+ G PGP
Sbjct: 242 TPGPAGPPGPPGPAGAPGQPGQSGSAQPGGPGP 274
Score = 29.1 bits (62), Expect = 5.0
Identities = 14/35 (40%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Frame = -3
Query: 492 PPXXPGRPXPGGGXG-XXXPGGAXXXGXPGPGXXP 391
P PG+ P G G GGA G PGP P
Sbjct: 181 PSGAPGQKGPSGAPGAPGQSGGASLPGPPGPAGPP 215
>Z78064-1|CAB01509.1| 313|Caenorhabditis elegans Hypothetical
protein F57B1.3 protein.
Length = 313
Score = 30.7 bits (66), Expect = 1.6
Identities = 13/33 (39%), Positives = 14/33 (42%)
Frame = -3
Query: 501 TGXPPXXPGRPXPGGGXGXXXPGGAXXXGXPGP 403
T P PG P P G G G+ G PGP
Sbjct: 238 TPGPAGPPGPPGPAGAPGQPGQSGSGQPGGPGP 270
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 30.7 bits (66), Expect = 1.6
Identities = 16/38 (42%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Frame = -3
Query: 492 PPXXPGR-PXPGGGXGXXXPGGAXXXGXPGPGXXPXXP 382
PP PGR P P G G P G PG G P P
Sbjct: 300 PPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPP 337
>U80451-8|AAB37842.2| 288|Caenorhabditis elegans Collagen protein
20 protein.
Length = 288
Score = 30.7 bits (66), Expect = 1.6
Identities = 15/37 (40%), Positives = 16/37 (43%)
Frame = -3
Query: 492 PPXXPGRPXPGGGXGXXXPGGAXXXGXPGPGXXPXXP 382
PP PG+P GG G PG G PG P P
Sbjct: 212 PPGEPGQPGEPGGPG--EPGADGRPGHPGRAGPPGPP 246
Score = 29.5 bits (63), Expect = 3.8
Identities = 14/31 (45%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
Frame = -3
Query: 489 PXXPGRPXPGGGXGXXXPGG-AXXXGXPGPG 400
P G P P GG G P G G PGPG
Sbjct: 155 PGPKGPPGPPGGHGEPGPAGRGGPRGPPGPG 185
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 30.7 bits (66), Expect = 1.6
Identities = 16/38 (42%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Frame = -3
Query: 492 PPXXPGR-PXPGGGXGXXXPGGAXXXGXPGPGXXPXXP 382
PP PGR P P G G P G PG G P P
Sbjct: 310 PPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPP 347
>AF022985-12|AAB69959.1| 319|Caenorhabditis elegans Collagen
protein 143 protein.
Length = 319
Score = 30.7 bits (66), Expect = 1.6
Identities = 13/36 (36%), Positives = 14/36 (38%)
Frame = -3
Query: 489 PXXPGRPXPGGGXGXXXPGGAXXXGXPGPGXXPXXP 382
P PG P GG PG + G GP P P
Sbjct: 187 PGSPGNPGRGGQRSRGTPGASGRPGPQGPAGAPGQP 222
>Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical
protein C53B4.5 protein.
Length = 289
Score = 30.3 bits (65), Expect = 2.2
Identities = 16/54 (29%), Positives = 17/54 (31%)
Frame = -3
Query: 492 PPXXPGRPXPGGGXGXXXPGGAXXXGXPGPGXXPXXPXXXXXFXXPAFXGXXXG 331
PP G+P P G G G G PG P P P G G
Sbjct: 181 PPGPGGKPGPAGPPGENGRNGEPQPGSPGEPGRPGQPGSRGPAGQPGKDGAQGG 234
Score = 29.1 bits (62), Expect = 5.0
Identities = 14/35 (40%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
Frame = -3
Query: 492 PPXXPGRPXPGGGXGXXXPGG-AXXXGXPGPGXXP 391
PP PG P G G P G G PGP P
Sbjct: 160 PPGPPGPEGPNGTAGNKGPAGPPGPGGKPGPAGPP 194
>Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1759
Score = 30.3 bits (65), Expect = 2.2
Identities = 15/35 (42%), Positives = 15/35 (42%), Gaps = 2/35 (5%)
Frame = -3
Query: 480 PGRPXPGGGXGXXXP--GGAXXXGXPGPGXXPXXP 382
PGR P G G P GG G PGP P P
Sbjct: 343 PGRDGPKGNSGPPGPPGGGTFNDGAPGPPGLPGRP 377
>Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1758
Score = 30.3 bits (65), Expect = 2.2
Identities = 15/35 (42%), Positives = 15/35 (42%), Gaps = 2/35 (5%)
Frame = -3
Query: 480 PGRPXPGGGXGXXXP--GGAXXXGXPGPGXXPXXP 382
PGR P G G P GG G PGP P P
Sbjct: 342 PGRDGPKGNSGPPGPPGGGTFNDGAPGPPGLPGRP 376
>U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein 2,
isoform a protein.
Length = 1758
Score = 30.3 bits (65), Expect = 2.2
Identities = 15/35 (42%), Positives = 15/35 (42%), Gaps = 2/35 (5%)
Frame = -3
Query: 480 PGRPXPGGGXGXXXP--GGAXXXGXPGPGXXPXXP 382
PGR P G G P GG G PGP P P
Sbjct: 342 PGRDGPKGNSGPPGPPGGGTFNDGAPGPPGLPGRP 376
>U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein 2,
isoform b protein.
Length = 1759
Score = 30.3 bits (65), Expect = 2.2
Identities = 15/35 (42%), Positives = 15/35 (42%), Gaps = 2/35 (5%)
Frame = -3
Query: 480 PGRPXPGGGXGXXXP--GGAXXXGXPGPGXXPXXP 382
PGR P G G P GG G PGP P P
Sbjct: 343 PGRDGPKGNSGPPGPPGGGTFNDGAPGPPGLPGRP 377
>U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV)
collagen protein.
Length = 1795
Score = 30.3 bits (65), Expect = 2.2
Identities = 15/35 (42%), Positives = 15/35 (42%), Gaps = 2/35 (5%)
Frame = -3
Query: 480 PGRPXPGGGXGXXXP--GGAXXXGXPGPGXXPXXP 382
PGR P G G P GG G PGP P P
Sbjct: 379 PGRDGPKGNSGPPGPPGGGTFNDGAPGPPGLPGRP 413
>AL032627-19|CAD66222.1| 309|Caenorhabditis elegans Hypothetical
protein Y41C4A.16 protein.
Length = 309
Score = 30.3 bits (65), Expect = 2.2
Identities = 14/31 (45%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
Frame = -3
Query: 492 PPXXPGRPXPGGGXG-XXXPGGAXXXGXPGP 403
PP PG P P G G PG G PGP
Sbjct: 162 PPGAPGSPGPQGNAGAPGQPGHGGGSGAPGP 192
>AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical
protein C24F3.6 protein.
Length = 291
Score = 30.3 bits (65), Expect = 2.2
Identities = 16/54 (29%), Positives = 17/54 (31%)
Frame = -3
Query: 492 PPXXPGRPXPGGGXGXXXPGGAXXXGXPGPGXXPXXPXXXXXFXXPAFXGXXXG 331
PP G+P P G G G G PG P P P G G
Sbjct: 183 PPGPGGKPGPAGPPGENGNNGEPQPGAPGEPGQPGQPGQRGPAGEPGKDGSPGG 236
Score = 29.9 bits (64), Expect = 2.9
Identities = 15/34 (44%), Positives = 15/34 (44%)
Frame = -3
Query: 492 PPXXPGRPXPGGGXGXXXPGGAXXXGXPGPGXXP 391
P PG P P G G PG G PGPG P
Sbjct: 159 PLGPPGPPGPEGPNG--EPGNKGPAGPPGPGGKP 190
Score = 29.1 bits (62), Expect = 5.0
Identities = 14/35 (40%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
Frame = -3
Query: 492 PPXXPGRPXPGGGXGXXXPGG-AXXXGXPGPGXXP 391
PP PG P G G P G G PGP P
Sbjct: 162 PPGPPGPEGPNGEPGNKGPAGPPGPGGKPGPAGPP 196
>AL132952-24|CAB61143.2| 351|Caenorhabditis elegans Hypothetical
protein Y51H4A.9 protein.
Length = 351
Score = 29.9 bits (64), Expect = 2.9
Identities = 12/30 (40%), Positives = 13/30 (43%)
Frame = -3
Query: 492 PPXXPGRPXPGGGXGXXXPGGAXXXGXPGP 403
P PG P P G G G+ G PGP
Sbjct: 279 PAGPPGPPGPSGAPGHPGQAGSSLPGAPGP 308
>AF022985-9|AAB69960.1| 314|Caenorhabditis elegans Collagen protein
141 protein.
Length = 314
Score = 29.9 bits (64), Expect = 2.9
Identities = 13/36 (36%), Positives = 14/36 (38%)
Frame = -3
Query: 489 PXXPGRPXPGGGXGXXXPGGAXXXGXPGPGXXPXXP 382
P PG P GG PG + G GP P P
Sbjct: 194 PGSPGNPGRGGQRSRGLPGPSGRPGPQGPAGGPGQP 229
Score = 29.1 bits (62), Expect = 5.0
Identities = 21/81 (25%), Positives = 23/81 (28%), Gaps = 1/81 (1%)
Frame = -3
Query: 489 PXXPGRPXPGG-GXGXXXPGGAXXXGXPGPGXXPXXPXXXXXFXXPAFXGXXXGXXVAXF 313
P GRP P G G PG + G PG P P P G
Sbjct: 211 PGPSGRPGPQGPAGGPGQPGQSGGSGTPGQPGAPGAPGHPGQAGTPGTPGAPGNSGAPGG 270
Query: 312 PRAXFXXPXXRCGSAPXRRXF 250
A P A +R F
Sbjct: 271 DAAYCPCPARSAAMAARKRVF 291
Score = 29.1 bits (62), Expect = 5.0
Identities = 14/38 (36%), Positives = 15/38 (39%), Gaps = 1/38 (2%)
Frame = -3
Query: 492 PPXXPGRPXPGGGXG-XXXPGGAXXXGXPGPGXXPXXP 382
P PG+P GG G PG G PG P P
Sbjct: 222 PAGGPGQPGQSGGSGTPGQPGAPGAPGHPGQAGTPGTP 259
Score = 28.3 bits (60), Expect = 8.8
Identities = 12/30 (40%), Positives = 13/30 (43%)
Frame = -3
Query: 480 PGRPXPGGGXGXXXPGGAXXXGXPGPGXXP 391
PG+P G G GG G PGP P
Sbjct: 188 PGQPGHPGSPGNPGRGGQRSRGLPGPSGRP 217
>AC024775-6|AAK68452.2| 304|Caenorhabditis elegans Collagen protein
108 protein.
Length = 304
Score = 29.9 bits (64), Expect = 2.9
Identities = 13/36 (36%), Positives = 14/36 (38%)
Frame = -3
Query: 489 PXXPGRPXPGGGXGXXXPGGAXXXGXPGPGXXPXXP 382
P PG+P G PG G PGP P P
Sbjct: 203 PGSPGKPGEDGKSEPITPGAPGPAGPPGPQGPPGAP 238
>U61948-2|AAB03143.2| 345|Caenorhabditis elegans Collagen protein
14 protein.
Length = 345
Score = 29.5 bits (63), Expect = 3.8
Identities = 14/34 (41%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Frame = -3
Query: 489 PXXPGRPXPGGGXGXXXPGGA-XXXGXPGPGXXP 391
P PG+P P G G GG G PGP P
Sbjct: 279 PGPPGQPGPAGPPGENGKGGGQGPSGLPGPPGQP 312
>U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protein
34 protein.
Length = 299
Score = 29.5 bits (63), Expect = 3.8
Identities = 16/41 (39%), Positives = 16/41 (39%), Gaps = 4/41 (9%)
Frame = -3
Query: 492 PPXXPGRPXPGGGXG----XXXPGGAXXXGXPGPGXXPXXP 382
PP PG P P G G PG G PGP P P
Sbjct: 152 PPGPPGPPGPPGDSGEPGSPGLPGQDAAPGEPGPKGPPGPP 192
Score = 29.5 bits (63), Expect = 3.8
Identities = 14/34 (41%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Frame = -3
Query: 480 PGRPXPGGGXGXXX-PGGAXXXGXPGPGXXPXXP 382
PG+P P G G PG G PGP P P
Sbjct: 242 PGQPGPKGPNGPDGQPGADGNPGAPGPAGPPGSP 275
Score = 28.3 bits (60), Expect = 8.8
Identities = 14/38 (36%), Positives = 15/38 (39%), Gaps = 1/38 (2%)
Frame = -3
Query: 492 PPXXPGRPXPGGGXGXXXPGGA-XXXGXPGPGXXPXXP 382
PP PG+P G G P G G PG P P
Sbjct: 229 PPGSPGQPGADGSPGQPGPKGPNGPDGQPGADGNPGAP 266
>U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protein
43 protein.
Length = 303
Score = 29.5 bits (63), Expect = 3.8
Identities = 15/38 (39%), Positives = 15/38 (39%), Gaps = 1/38 (2%)
Frame = -3
Query: 492 PPXXPGRPX-PGGGXGXXXPGGAXXXGXPGPGXXPXXP 382
PP PG P PG PG G PGP P P
Sbjct: 159 PPGPPGAPGDPGEAGTPGRPGTDATPGLPGPRGPPGPP 196
>M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen
protein.
Length = 298
Score = 29.5 bits (63), Expect = 3.8
Identities = 14/34 (41%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Frame = -3
Query: 480 PGRPXPGGGXGXXX-PGGAXXXGXPGPGXXPXXP 382
PG+P P G G PG G PGP P P
Sbjct: 241 PGQPGPKGPNGPDGQPGADGNPGAPGPAGPPGSP 274
Score = 28.3 bits (60), Expect = 8.8
Identities = 14/38 (36%), Positives = 15/38 (39%), Gaps = 1/38 (2%)
Frame = -3
Query: 492 PPXXPGRPXPGGGXGXXXPGGA-XXXGXPGPGXXPXXP 382
PP PG+P G G P G G PG P P
Sbjct: 228 PPGSPGQPGADGSPGQPGPKGPNGPDGQPGADGNPGAP 265
>M25480-1|AAA27986.1| 326|Caenorhabditis elegans collagen protein.
Length = 326
Score = 29.5 bits (63), Expect = 3.8
Identities = 14/34 (41%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Frame = -3
Query: 489 PXXPGRPXPGGGXGXXXPGGA-XXXGXPGPGXXP 391
P PG+P P G G GG G PGP P
Sbjct: 260 PGPPGQPGPAGPPGENGKGGGQGPSGLPGPPGQP 293
>AL032627-21|CAD66221.1| 289|Caenorhabditis elegans Hypothetical
protein Y41C4A.19 protein.
Length = 289
Score = 29.5 bits (63), Expect = 3.8
Identities = 14/31 (45%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
Frame = -3
Query: 492 PPXXPGRPXPGGGXG-XXXPGGAXXXGXPGP 403
PP PG P P G G PG G PGP
Sbjct: 141 PPGAPGSPGPQGDAGAPGQPGFGSGFGAPGP 171
>AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular
collagen RAM-4 protein.
Length = 299
Score = 29.5 bits (63), Expect = 3.8
Identities = 16/41 (39%), Positives = 16/41 (39%), Gaps = 4/41 (9%)
Frame = -3
Query: 492 PPXXPGRPXPGGGXG----XXXPGGAXXXGXPGPGXXPXXP 382
PP PG P P G G PG G PGP P P
Sbjct: 152 PPGPPGPPGPPGDSGEPGSPGLPGQDAAPGEPGPKGPPGPP 192
Score = 29.5 bits (63), Expect = 3.8
Identities = 14/34 (41%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Frame = -3
Query: 480 PGRPXPGGGXGXXX-PGGAXXXGXPGPGXXPXXP 382
PG+P P G G PG G PGP P P
Sbjct: 242 PGQPGPKGPNGPDGQPGADGNPGAPGPAGPPGSP 275
Score = 28.3 bits (60), Expect = 8.8
Identities = 14/38 (36%), Positives = 15/38 (39%), Gaps = 1/38 (2%)
Frame = -3
Query: 492 PPXXPGRPXPGGGXGXXXPGGA-XXXGXPGPGXXPXXP 382
PP PG+P G G P G G PG P P
Sbjct: 229 PPGSPGQPGADGSPGQPGPKGPNGPDGQPGADGNPGAP 266
>AC024805-16|AAK39336.1| 448|Caenorhabditis elegans Hypothetical
protein Y51H7C.1 protein.
Length = 448
Score = 29.5 bits (63), Expect = 3.8
Identities = 15/37 (40%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Frame = -3
Query: 489 PXXPGRPX-PGGGXGXXXPGGAXXXGXPGPGXXPXXP 382
P PG P PG G PGG G PG P P
Sbjct: 36 PGGPGTPGGPGTPGGPGTPGGLGTPGGPGTPGGPGTP 72
>AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen
protein.
Length = 303
Score = 29.5 bits (63), Expect = 3.8
Identities = 15/38 (39%), Positives = 15/38 (39%), Gaps = 1/38 (2%)
Frame = -3
Query: 492 PPXXPGRPX-PGGGXGXXXPGGAXXXGXPGPGXXPXXP 382
PP PG P PG PG G PGP P P
Sbjct: 159 PPGPPGAPGDPGEAGTPGRPGTDATPGLPGPRGPPGPP 196
>Z81143-1|CAB03513.1| 381|Caenorhabditis elegans Hypothetical
protein ZK265.2 protein.
Length = 381
Score = 29.1 bits (62), Expect = 5.0
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = -3
Query: 480 PGRPXPGGGXGXXXPGGAXXXGXPGPGXXPXXP 382
PG P P G G G G PGP P P
Sbjct: 196 PGLPGPPGEDGPVGQNGTRGQGQPGPVGAPGAP 228
>Z74036-2|CAA98487.1| 266|Caenorhabditis elegans Hypothetical
protein F55C10.3 protein.
Length = 266
Score = 29.1 bits (62), Expect = 5.0
Identities = 15/33 (45%), Positives = 15/33 (45%), Gaps = 2/33 (6%)
Frame = -3
Query: 492 PPXXPGRPXPGG-GXGXXXPGGAXXXGXPG-PG 400
PP PG P P G G PG G PG PG
Sbjct: 119 PPGPPGPPGPSGDAGGNGNPGSPGQDGQPGAPG 151
>Z74036-1|CAA98486.1| 299|Caenorhabditis elegans Hypothetical
protein F55C10.2 protein.
Length = 299
Score = 29.1 bits (62), Expect = 5.0
Identities = 15/33 (45%), Positives = 15/33 (45%), Gaps = 2/33 (6%)
Frame = -3
Query: 492 PPXXPGRPXPGG-GXGXXXPGGAXXXGXPG-PG 400
PP PG P P G G PG G PG PG
Sbjct: 152 PPGPPGPPGPSGDAGGNGNPGSPGQDGQPGAPG 184
>Z68507-1|CAA92826.1| 337|Caenorhabditis elegans Hypothetical
protein M18.1 protein.
Length = 337
Score = 29.1 bits (62), Expect = 5.0
Identities = 14/33 (42%), Positives = 15/33 (45%)
Frame = -3
Query: 489 PXXPGRPXPGGGXGXXXPGGAXXXGXPGPGXXP 391
P PG+P P G G PG A G PG P
Sbjct: 238 PGQPGQPGPDGHPG--QPGNAGPPGTPGAAGQP 268
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical
protein W01B6.7 protein.
Length = 301
Score = 29.1 bits (62), Expect = 5.0
Identities = 14/33 (42%), Positives = 15/33 (45%)
Frame = -3
Query: 480 PGRPXPGGGXGXXXPGGAXXXGXPGPGXXPXXP 382
P +P PGG G P G G PGP P P
Sbjct: 146 PCQPCPGGPPGPAGPAG--PPGPPGPDGNPGSP 176
Score = 28.3 bits (60), Expect = 8.8
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -3
Query: 462 GGGXGXXXPGGAXXXGXPGPGXXPXXP 382
GGG G G G PGPG P P
Sbjct: 90 GGGGGGGGCDGCCNPGPPGPGGSPGKP 116
>Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical
protein F02D10.1 protein.
Length = 316
Score = 29.1 bits (62), Expect = 5.0
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = -3
Query: 492 PPXXPGRPXPGGGXGXXXPGGAXXXGXPGPGXXP 391
PP G P G G GG G PGP P
Sbjct: 240 PPGPAGPAGPDGQSGSGSAGGPGPKGPPGPAGQP 273
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 29.1 bits (62), Expect = 5.0
Identities = 14/33 (42%), Positives = 15/33 (45%)
Frame = -3
Query: 480 PGRPXPGGGXGXXXPGGAXXXGXPGPGXXPXXP 382
P +P PGG G P G G PGP P P
Sbjct: 146 PCQPCPGGPPGPAGPAG--PPGPPGPDGNPGSP 176
Score = 28.3 bits (60), Expect = 8.8
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -3
Query: 462 GGGXGXXXPGGAXXXGXPGPGXXPXXP 382
GGG G G G PGPG P P
Sbjct: 90 GGGGGGGGCDGCCNPGPPGPGGSPGKP 116
>U55366-4|AAA97982.1| 310|Caenorhabditis elegans Collagen protein
139 protein.
Length = 310
Score = 29.1 bits (62), Expect = 5.0
Identities = 15/32 (46%), Positives = 16/32 (50%), Gaps = 2/32 (6%)
Frame = -3
Query: 489 PXXPGRPX-PGGGXGXXXPGGAXXXGXP-GPG 400
P PG+P PG G G PG G P GPG
Sbjct: 172 PGAPGKPGAPGVGGGSGAPGAPGPKGAPGGPG 203
>U41553-3|AAA83293.1| 289|Caenorhabditis elegans Collagen protein
19 protein.
Length = 289
Score = 29.1 bits (62), Expect = 5.0
Identities = 15/35 (42%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Frame = -3
Query: 492 PPXXPGRPXPGGGXGXXXP-GGAXXXGXPGPGXXP 391
PP PG P G G P GG G PGP P
Sbjct: 145 PPGRPGPKGPSGLPGSAGPAGGNGRRGPPGPVGGP 179
>M25481-1|AAA27987.1| 283|Caenorhabditis elegans collagen protein.
Length = 283
Score = 29.1 bits (62), Expect = 5.0
Identities = 15/35 (42%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Frame = -3
Query: 492 PPXXPGRPXPGGGXGXXXP-GGAXXXGXPGPGXXP 391
PP PG P G G P GG G PGP P
Sbjct: 139 PPGCPGPKGPSGLPGSAGPAGGNGRRGPPGPVGGP 173
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 2 (col-2) gene, complete
cds. ).
Length = 301
Score = 29.1 bits (62), Expect = 5.0
Identities = 14/33 (42%), Positives = 15/33 (45%)
Frame = -3
Query: 480 PGRPXPGGGXGXXXPGGAXXXGXPGPGXXPXXP 382
P +P PGG G P G G PGP P P
Sbjct: 146 PCQPCPGGPPGPAGPAG--PPGPPGPDGNPGSP 176
Score = 28.3 bits (60), Expect = 8.8
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -3
Query: 462 GGGXGXXXPGGAXXXGXPGPGXXPXXP 382
GGG G G G PGPG P P
Sbjct: 90 GGGGGGGGCDGCCNPGPPGPGGSPGKP 116
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 29.1 bits (62), Expect = 5.0
Identities = 14/33 (42%), Positives = 15/33 (45%)
Frame = -3
Query: 480 PGRPXPGGGXGXXXPGGAXXXGXPGPGXXPXXP 382
P +P PGG G P G G PGP P P
Sbjct: 146 PCQPCPGGPPGPAGPAG--PPGPPGPDGNPGSP 176
Score = 28.3 bits (60), Expect = 8.8
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -3
Query: 462 GGGXGXXXPGGAXXXGXPGPGXXPXXP 382
GGG G G G PGPG P P
Sbjct: 90 GGGGGGGGCDGCCNPGPPGPGGSPGKP 116
>AF000198-7|AAB53052.1| 418|Caenorhabditis elegans Collagen protein
50 protein.
Length = 418
Score = 29.1 bits (62), Expect = 5.0
Identities = 12/33 (36%), Positives = 12/33 (36%)
Frame = -3
Query: 480 PGRPXPGGGXGXXXPGGAXXXGXPGPGXXPXXP 382
PG P P G G P G P P P P
Sbjct: 235 PGPPGPAGPPGPAGPAGEDAYAQPSPAGTPGPP 267
Score = 28.7 bits (61), Expect = 6.7
Identities = 15/38 (39%), Positives = 15/38 (39%), Gaps = 1/38 (2%)
Frame = -3
Query: 492 PPXXPGRPXPGG-GXGXXXPGGAXXXGXPGPGXXPXXP 382
P G P G G G PG A G PGP P P
Sbjct: 181 PAGPAGAAGPDGEGAGYAEPGPAGPAGPPGPDGQPGAP 218
>Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical
protein F23H12.4 protein.
Length = 301
Score = 28.7 bits (61), Expect = 6.7
Identities = 15/37 (40%), Positives = 15/37 (40%)
Frame = -3
Query: 492 PPXXPGRPXPGGGXGXXXPGGAXXXGXPGPGXXPXXP 382
P PG P P G G PG A G PG P P
Sbjct: 151 PQGPPGPPGPPGAPGD--PGEAGTPGRPGTDAAPGSP 185
>Z74042-8|CAA98525.1| 299|Caenorhabditis elegans Hypothetical
protein T11F9.9 protein.
Length = 299
Score = 28.7 bits (61), Expect = 6.7
Identities = 15/33 (45%), Positives = 15/33 (45%), Gaps = 2/33 (6%)
Frame = -3
Query: 492 PPXXPGRPXPGGGXG-XXXPGGAXXXGXPG-PG 400
PP PG P P G G PG G PG PG
Sbjct: 152 PPGPPGPPGPSGDAGSNGNPGSPGQDGQPGAPG 184
>Z71178-1|CAA94874.1| 297|Caenorhabditis elegans Hypothetical
protein B0024.1 protein.
Length = 297
Score = 28.7 bits (61), Expect = 6.7
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = -3
Query: 489 PXXPGRPXPGGGXGXXXPGGAXXXGXPGPGXXPXXP 382
P PG P G G PG G PG P P
Sbjct: 203 PGQPGHPGKDGRRGHGSPGAPGRAGQPGRQGAPGNP 238
>V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-1 coding for a collagen.
).
Length = 296
Score = 28.7 bits (61), Expect = 6.7
Identities = 15/37 (40%), Positives = 15/37 (40%)
Frame = -3
Query: 492 PPXXPGRPXPGGGXGXXXPGGAXXXGXPGPGXXPXXP 382
P PG P P G G PG A G PG P P
Sbjct: 146 PQGPPGPPGPPGAPGD--PGEAGTPGRPGTDAAPGSP 180
>U55373-5|AAC25888.1| 289|Caenorhabditis elegans Collagen protein
140, isoform a protein.
Length = 289
Score = 28.7 bits (61), Expect = 6.7
Identities = 15/38 (39%), Positives = 15/38 (39%), Gaps = 1/38 (2%)
Frame = -3
Query: 492 PPXXPGRPXPGGGXGXXXPGG-AXXXGXPGPGXXPXXP 382
PP PG P G G P G G PGP P P
Sbjct: 146 PPGRPGPRGPPGEVGPAGPSGDNGRKGPPGPPGGPGGP 183
Score = 28.7 bits (61), Expect = 6.7
Identities = 16/34 (47%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Frame = -3
Query: 498 GXPPXXPGRPXPGGGXGXXXPGGAXXXGXPG-PG 400
G P PGRP P G G PG G PG PG
Sbjct: 189 GGRPGNPGRPGPAGPRG--EPGTEYKPGQPGRPG 220
>U55373-4|ABR92605.1| 210|Caenorhabditis elegans Collagen protein
140, isoform b protein.
Length = 210
Score = 28.7 bits (61), Expect = 6.7
Identities = 15/38 (39%), Positives = 15/38 (39%), Gaps = 1/38 (2%)
Frame = -3
Query: 492 PPXXPGRPXPGGGXGXXXPGG-AXXXGXPGPGXXPXXP 382
PP PG P G G P G G PGP P P
Sbjct: 146 PPGRPGPRGPPGEVGPAGPSGDNGRKGPPGPPGGPGGP 183
>J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 1 (col-1) gene, complete
cds. ).
Length = 296
Score = 28.7 bits (61), Expect = 6.7
Identities = 15/37 (40%), Positives = 15/37 (40%)
Frame = -3
Query: 492 PPXXPGRPXPGGGXGXXXPGGAXXXGXPGPGXXPXXP 382
P PG P P G G PG A G PG P P
Sbjct: 146 PQGPPGPPGPPGAPGD--PGEAGTPGRPGTDAAPGSP 180
>Z81525-6|CAB82206.2| 346|Caenorhabditis elegans Hypothetical
protein F33A8.9 protein.
Length = 346
Score = 28.3 bits (60), Expect = 8.8
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = -3
Query: 501 TGXPPXXPGRPXPGGGXGXXXPGGAXXXGXPG 406
T PP PG P P G G P G G PG
Sbjct: 233 TSGPPGPPGPPGPPGNPGGIGPRG--PPGDPG 262
>Z81479-3|CAB03942.1| 283|Caenorhabditis elegans Hypothetical
protein C34F6.3 protein.
Length = 283
Score = 28.3 bits (60), Expect = 8.8
Identities = 14/37 (37%), Positives = 15/37 (40%)
Frame = -3
Query: 492 PPXXPGRPXPGGGXGXXXPGGAXXXGXPGPGXXPXXP 382
PP PG+P G G P G G PG P P
Sbjct: 207 PPGQPGQPGEPGSPGEPGPDG--RAGHPGRNGPPGPP 241
>Z81479-2|CAB03941.1| 283|Caenorhabditis elegans Hypothetical
protein C34F6.2 protein.
Length = 283
Score = 28.3 bits (60), Expect = 8.8
Identities = 14/37 (37%), Positives = 15/37 (40%)
Frame = -3
Query: 492 PPXXPGRPXPGGGXGXXXPGGAXXXGXPGPGXXPXXP 382
PP PG+P G G P G G PG P P
Sbjct: 207 PPGQPGQPGEPGSPGEPGPDG--RAGHPGRNGPPGPP 241
>Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical
protein T21B4.2 protein.
Length = 312
Score = 28.3 bits (60), Expect = 8.8
Identities = 14/33 (42%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
Frame = -3
Query: 501 TGXPPXXPGRPXPGGGXGXXX-PGGAXXXGXPG 406
+G PG P P GG G PGG G PG
Sbjct: 197 SGGAAGPPGPPGPPGGPGNDGQPGGPGNPGAPG 229
>Z70208-1|CAA94141.1| 339|Caenorhabditis elegans Hypothetical
protein F54B11.1 protein.
Length = 339
Score = 28.3 bits (60), Expect = 8.8
Identities = 15/37 (40%), Positives = 15/37 (40%)
Frame = -3
Query: 492 PPXXPGRPXPGGGXGXXXPGGAXXXGXPGPGXXPXXP 382
PP G P G G PGG G PG G P P
Sbjct: 145 PPGPSGHPGKPGRPGR--PGGHGMPGMPGLGASPCQP 179
>Z46791-3|CAA86757.1| 323|Caenorhabditis elegans Hypothetical
protein C09G5.4 protein.
Length = 323
Score = 28.3 bits (60), Expect = 8.8
Identities = 15/38 (39%), Positives = 15/38 (39%), Gaps = 1/38 (2%)
Frame = -3
Query: 492 PPXXPGRPXPGGGXGXXXP-GGAXXXGXPGPGXXPXXP 382
P PG P GG G P G A G PG P P
Sbjct: 154 PNGQPGHPGQGGSQGPAGPRGPAGDAGAPGQVGAPGNP 191
Score = 28.3 bits (60), Expect = 8.8
Identities = 15/33 (45%), Positives = 16/33 (48%), Gaps = 2/33 (6%)
Frame = -3
Query: 492 PPXXPGRPXPGGGXGXXXPGG-AXXXGXPG-PG 400
P PG+P GG G P G A G PG PG
Sbjct: 216 PSGAPGQPGQSGGQGQQGPAGPAGPDGQPGQPG 248
>AF047656-13|AAC05105.1| 313|Caenorhabditis elegans Collagen
protein 116 protein.
Length = 313
Score = 28.3 bits (60), Expect = 8.8
Identities = 16/50 (32%), Positives = 17/50 (34%)
Frame = -3
Query: 492 PPXXPGRPXPGGGXGXXXPGGAXXXGXPGPGXXPXXPXXXXXFXXPAFXG 343
P PG P P G G G G PG G P P P + G
Sbjct: 155 PAGPPGAPGPNGPPG--YEGQMGVPGLPGDGPTPGSPGPPGPPGPPGYPG 202
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,693,718
Number of Sequences: 27780
Number of extensions: 68039
Number of successful extensions: 1408
Number of sequences better than 10.0: 73
Number of HSP's better than 10.0 without gapping: 307
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1226
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2542323834
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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