Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP15_F_D13
(905 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 31 0.17
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 31 0.23
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 30 0.39
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 30 0.52
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 29 0.69
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 28 1.6
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 27 4.8
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 26 6.4
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 26 6.4
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 31.5 bits (68), Expect = 0.17
Identities = 19/55 (34%), Positives = 19/55 (34%), Gaps = 2/55 (3%)
Frame = +3
Query: 465 KXPPPPGXXGXFFXXPXPXPXXKXXXPGFXGGGGXXPPPXG--GXXXPPKPGXXP 623
K PPPP P P P GG PPP G G PP P P
Sbjct: 730 KSPPPP-PPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 27.1 bits (57), Expect = 3.7
Identities = 15/47 (31%), Positives = 16/47 (34%), Gaps = 6/47 (12%)
Frame = +3
Query: 765 PPPXXKXKKXRXSPPXKTPPXXPPLXXPPPXXKKX------PPPXPP 887
PPP P PP P + PPP PPP PP
Sbjct: 734 PPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPP 780
Score = 26.2 bits (55), Expect = 6.4
Identities = 13/31 (41%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
Frame = +3
Query: 816 TPPXXP-PLXXPPPXXKKXPPPXPPXRKXGA 905
TP P P+ P P PPP PP GA
Sbjct: 743 TPAPAPIPVPPPAPIMGGPPPPPPPPGVAGA 773
Score = 25.8 bits (54), Expect = 8.5
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = +2
Query: 803 PPXXNPPXGSPSXXPPPXTKKXPPPXSPXEKXG 901
PP PP G PPP PPP P G
Sbjct: 761 PPPPPPPPGVAGAGPPP-----PPPPPPAVSAG 788
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 31.1 bits (67), Expect = 0.23
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = +3
Query: 804 PPXKTPPXXPPLXXPPPXXKKXPPPXPP 887
PP PP PP PP + PPP PP
Sbjct: 5 PPGNPPPPPPPPGFEPP--SQPPPPPPP 30
Score = 27.9 bits (59), Expect = 2.1
Identities = 12/32 (37%), Positives = 14/32 (43%)
Frame = -1
Query: 506 PKKXXPXPXGGGXFXXKKKXPPPPPXXXKKKK 411
P P P G + PPPPP KK+K
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPPPPGYVKKRK 37
Score = 27.1 bits (57), Expect = 3.7
Identities = 12/33 (36%), Positives = 14/33 (42%)
Frame = -1
Query: 506 PKKXXPXPXGGGXFXXKKKXPPPPPXXXKKKKK 408
P P P F + PPPPP KK+K
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPPGYVKKRK 37
Score = 26.2 bits (55), Expect = 6.4
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = +2
Query: 758 GXPPPXXKXKKXPXXPPXXNPPXGSPSXXPPPXTKK 865
G PPP P PP PP P PP KK
Sbjct: 7 GNPPP-------PPPPPGFEPPSQPPPPPPPGYVKK 35
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 30.3 bits (65), Expect = 0.39
Identities = 15/48 (31%), Positives = 16/48 (33%)
Frame = +2
Query: 758 GXPPPXXKXKKXPXXPPXXNPPXGSPSXXPPPXTKKXPPPXSPXEKXG 901
G P P P PP S PPP PPP +P G
Sbjct: 1679 GGMAPAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAG 1726
Score = 28.7 bits (61), Expect = 1.2
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = +2
Query: 764 PPPXXKXKKXPXXPPXXNPPXGSPSXXPPPXTKKXPP 874
PPP P PP P G PS PPP P
Sbjct: 1708 PPPPMSVPPPPSAPPM---PAGPPSAPPPPLPASSAP 1741
Score = 25.8 bits (54), Expect = 8.5
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +3
Query: 816 TPPXXPPLXXPPPXXKKXPPPXPP 887
TPP PP+ PPP P PP
Sbjct: 1706 TPPP-PPMSVPPPPSAPPMPAGPP 1728
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 29.9 bits (64), Expect = 0.52
Identities = 35/142 (24%), Positives = 37/142 (26%), Gaps = 3/142 (2%)
Frame = +2
Query: 470 PPPPXXXGXFFXXPXPXPPXKXPRPRXXGGGGXXXXPXGGXXXSPXTXGXPPKKXFXXRX 649
PP P G P P P P G P P G PP
Sbjct: 1112 PPVPAPSGA---PPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPK----- 1163
Query: 650 PXRAXPPKXGAXXGGFLXXXXXXXXXXXXXXXXXXXGXPPPXXKXKKXPXXPPXXNPPXG 829
P A PP G P P P PP PP
Sbjct: 1164 PSVAAPPVPAPSSG---IPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVP 1220
Query: 830 SPSXXPPP---XTKKXPPPXSP 886
+PS PP T K PP +P
Sbjct: 1221 TPSAGLPPVPVPTAKAPPVPAP 1242
Score = 29.1 bits (62), Expect = 0.91
Identities = 30/128 (23%), Positives = 30/128 (23%), Gaps = 5/128 (3%)
Frame = +3
Query: 516 PXPXXKXXXPGFXGGGGXXPPPXGGXXXPPKP---GXXPQKKXXXXGPX-KGPXPPKXXP 683
P P P G P P PP P G P K P P P
Sbjct: 1103 PVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVP 1162
Query: 684 XGGVF*XXXXXXXXXXXXXXXXXXGGXPPPXXKXKKXRXSPPXKTPPXXPPLXXPP-PXX 860
V G P P P PP PP PP P
Sbjct: 1163 KPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTP 1222
Query: 861 KKXPPPXP 884
PP P
Sbjct: 1223 SAGLPPVP 1230
Score = 28.3 bits (60), Expect = 1.6
Identities = 16/49 (32%), Positives = 16/49 (32%), Gaps = 1/49 (2%)
Frame = +2
Query: 758 GXPP-PXXKXKKXPXXPPXXNPPXGSPSXXPPPXTKKXPPPXSPXEKXG 901
G PP P P PP PP PS PP P P G
Sbjct: 1177 GIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAG 1225
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 29.5 bits (63), Expect = 0.69
Identities = 17/53 (32%), Positives = 18/53 (33%), Gaps = 6/53 (11%)
Frame = +3
Query: 765 PPPXXKXKKXRXSPPX------KTPPXXPPLXXPPPXXKKXPPPXPPXRKXGA 905
PPP + PP TPP P PP PP PP GA
Sbjct: 391 PPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGA 443
Score = 26.6 bits (56), Expect = 4.8
Identities = 13/42 (30%), Positives = 15/42 (35%), Gaps = 1/42 (2%)
Frame = +3
Query: 765 PPPXXKXKKXRXSPPXKTPPXX-PPLXXPPPXXKKXPPPXPP 887
PPP S P +PP P+ P PP PP
Sbjct: 253 PPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPLPP 294
Score = 26.6 bits (56), Expect = 4.8
Identities = 13/47 (27%), Positives = 16/47 (34%)
Frame = +2
Query: 764 PPPXXKXKKXPXXPPXXNPPXGSPSXXPPPXTKKXPPPXSPXEKXGR 904
PPP ++ PP N S PPP + P GR
Sbjct: 312 PPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGR 358
Score = 25.8 bits (54), Expect = 8.5
Identities = 17/56 (30%), Positives = 19/56 (33%), Gaps = 9/56 (16%)
Frame = +3
Query: 765 PPPXXKXKKXRXSPPXKTPPXXPP-----LXXPP----PXXKKXPPPXPPXRKXGA 905
PPP + + K PP PP PP PPP PP R A
Sbjct: 293 PPPSSRVSAAALAANKKRPPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAA 348
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 28.3 bits (60), Expect = 1.6
Identities = 13/40 (32%), Positives = 18/40 (45%)
Frame = +2
Query: 764 PPPXXKXKKXPXXPPXXNPPXGSPSXXPPPXTKKXPPPXS 883
P P + + PP + P SP+ PP +K P P S
Sbjct: 131 PTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSS 170
Score = 27.9 bits (59), Expect = 2.1
Identities = 14/39 (35%), Positives = 17/39 (43%), Gaps = 1/39 (2%)
Frame = +3
Query: 765 PPPXXKXKKXRXSPPXKTPPXXPPLXXP-PPXXKKXPPP 878
P P + + P K+PP P L PP K PPP
Sbjct: 166 PIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPP 204
Score = 26.6 bits (56), Expect = 4.8
Identities = 16/43 (37%), Positives = 17/43 (39%), Gaps = 4/43 (9%)
Frame = +2
Query: 767 PPXXKXKKXPXXP--PXXNPPXGS--PSXXPPPXTKKXPPPXS 883
PP P P P +PP PS PP K PPP S
Sbjct: 165 PPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPPLS 207
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 26.6 bits (56), Expect = 4.8
Identities = 14/27 (51%), Positives = 14/27 (51%)
Frame = -2
Query: 886 GGXGGGXFFXXGGGXXRGGXXGGVXXG 806
GG GGG GGG RGG GG G
Sbjct: 160 GGFGGGSRGGFGGG-SRGGSRGGFRGG 185
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 26.2 bits (55), Expect = 6.4
Identities = 11/30 (36%), Positives = 11/30 (36%)
Frame = +2
Query: 794 PXXPPXXNPPXGSPSXXPPPXTKKXPPPXS 883
P PP P P PPP PP S
Sbjct: 221 PEIPPTYTPKQADPLPAPPPPPPPTLPPQS 250
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 26.2 bits (55), Expect = 6.4
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = +3
Query: 807 PXKTPPXXPPLXXPPPXXKKXPPPXPPXR 893
P TP PP P P K PPP PP R
Sbjct: 725 PQVTPA--PPTPAPTPAVKHHPPP-PPVR 750
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,931,566
Number of Sequences: 5004
Number of extensions: 29468
Number of successful extensions: 275
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 176
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 458501510
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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