Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP15_F_D08
         (894 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_02_0976 + 12841257-12841306,12841396-12841528,12842126-12842191     73   3e-13
03_05_0610 - 26108546-26108671,26108739-26108789,26109410-261095...    71   9e-13
02_05_1349 + 35841694-35843738,35844506-35844624,35844932-358450...    31   1.6  
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943...    30   2.2  
06_01_1174 - 10025086-10027217,10027271-10027333,10027704-10027866     29   6.6  

>03_02_0976 + 12841257-12841306,12841396-12841528,12842126-12842191
          Length = 82

 Score = 72.9 bits (171), Expect = 3e-13
 Identities = 37/75 (49%), Positives = 48/75 (64%)
 Frame = +3

Query: 99  MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTSKMYVVCGAIR 278
           MQN+ G+ VDLY PRKCSA+NR+I AKDHASVQ+ I  VD   G        + + G IR
Sbjct: 1   MQNEEGQMVDLYVPRKCSATNRIITAKDHASVQINIGHVD-ENGLYDGRFTTFALSGFIR 59

Query: 279 RMGESDDCIVRLTKK 323
             G++D  + RL +K
Sbjct: 60  AQGDADSALDRLWQK 74


>03_05_0610 -
           26108546-26108671,26108739-26108789,26109410-26109542,
           26109633-26109682
          Length = 119

 Score = 71.3 bits (167), Expect = 9e-13
 Identities = 36/75 (48%), Positives = 47/75 (62%)
 Frame = +3

Query: 99  MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTSKMYVVCGAIR 278
           MQN+ G+ VDLY PRKCS +NR+I AKDHASVQ+ I  VD   G        + + G IR
Sbjct: 1   MQNEEGQMVDLYVPRKCSTTNRIITAKDHASVQINIGHVD-ENGLYDGRFTTFALSGFIR 59

Query: 279 RMGESDDCIVRLTKK 323
             G++D  + RL +K
Sbjct: 60  AQGDADSALDRLWQK 74


>02_05_1349 +
           35841694-35843738,35844506-35844624,35844932-35845075,
           35845189-35845310,35845474-35845609,35845861-35845957,
           35846727-35846899,35847099-35847262,35847466-35847537,
           35847833-35847928,35847999-35848124
          Length = 1097

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 13/28 (46%), Positives = 20/28 (71%)
 Frame = +1

Query: 91  HIKCRTTPVNSLTCTARGNARPATASST 174
           H++CR+TP +SLT     N  PA++SS+
Sbjct: 81  HLRCRSTPRDSLTYNTLLNHLPASSSSS 108


>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
            9435445-9435526,9435610-9435660,9435749-9435829,
            9435965-9436006,9436117-9436215,9438130-9438201,
            9438557-9438680,9438850-9439723,9440274-9440456,
            9440941-9442741,9442825-9443049,9443117-9443814,
            9444519-9444591
          Length = 1541

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 21/66 (31%), Positives = 22/66 (33%), Gaps = 2/66 (3%)
 Frame = -1

Query: 870  FWGNXIXPXGXGXXPXPPXEXXGXXGVXGGXKRXGAPKSKXP--FPGGWXXXLSRKNLSK 697
            F G    P   G    PP    G  GV G     GAP    P   PGG       + L  
Sbjct: 1169 FRGGTPPPNAHGGVAPPPPPPRGHGGVGGPPTPPGAPAPPMPPGVPGGPPPPPGGRGLPA 1228

Query: 696  PSPGXG 679
            P  G G
Sbjct: 1229 PPGGRG 1234


>06_01_1174 - 10025086-10027217,10027271-10027333,10027704-10027866
          Length = 785

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
 Frame = +3

Query: 45  FAFRILSIP-VYPCGRTYKMQNDAGEFVDLY-CPRKCSASNRLI 170
           F  R  S P + P G+  + Q D G  ++L  CP +CS + +L+
Sbjct: 243 FMHRSSSTPCLSPTGKDIQQQRDRGGPIELLVCPSRCSRTKQLV 286


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,563,378
Number of Sequences: 37544
Number of extensions: 344096
Number of successful extensions: 722
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 699
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 721
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2518669100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)