Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP15_F_D06
         (932 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_06_0335 + 33211705-33211800,33211886-33211982,33212078-332122...    33   0.32 
08_01_0841 + 8223768-8223871,8227749-8228745,8228779-8228828,822...    28   9.2  
07_01_1097 - 10068431-10068655,10068797-10068880,10068945-100692...    28   9.2  
01_06_1594 + 38509676-38509776,38509808-38510096                       28   9.2  

>03_06_0335 +
           33211705-33211800,33211886-33211982,33212078-33212204,
           33212953-33213138,33213702-33213789,33214028-33214084,
           33214171-33214260,33214339-33214461,33215024-33215098,
           33215169-33215228,33215464-33215580,33215854-33216093,
           33216181-33216246,33216370-33216459,33216914-33217003,
           33217309-33217398,33217702-33217770,33217841-33217921,
           33218108-33218215,33218336-33218439,33218822-33218935,
           33219018-33219231
          Length = 793

 Score = 33.1 bits (72), Expect = 0.32
 Identities = 20/63 (31%), Positives = 32/63 (50%)
 Frame = -2

Query: 265 SARTQPANKMAATELGRYKNIVTALITGNYVSLVSPNEPALTIIINLFLMQLIFSTTTHS 86
           S  T+    + +  L +Y NIVTAL   NY  ++   + + T ++ L ++Q I   TT  
Sbjct: 388 SRATKQIVALLSAPLEKYSNIVTALELSNYPRVMDYLDNSTTKVMALVIIQSIMKNTTCI 447

Query: 85  SKS 77
           S S
Sbjct: 448 STS 450


>08_01_0841 +
           8223768-8223871,8227749-8228745,8228779-8228828,
           8228896-8230396
          Length = 883

 Score = 28.3 bits (60), Expect = 9.2
 Identities = 15/51 (29%), Positives = 28/51 (54%)
 Frame = +3

Query: 189 ISAVTIFL*RPSSVAAILFAGCVRAEPISTIRNSNDERGCQLAFSRVGRRC 341
           I ++T+F     S+AA++ +  +RA  I  + N+N+ +  +    RVG  C
Sbjct: 535 IRSLTVFNEPSESIAALICSSKLRAVRILDLSNANEFKITRRDIERVGELC 585


>07_01_1097 -
           10068431-10068655,10068797-10068880,10068945-10069292,
           10069477-10069510,10069617-10070230,10079179-10079553,
           10079599-10079853,10079983-10080300
          Length = 750

 Score = 28.3 bits (60), Expect = 9.2
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = +3

Query: 300 RGCQLAFSRVGRRCLCLLAFKHSILTQK*IKMTTN 404
           R C L FS+   RCL    F H+   Q  +KM+ N
Sbjct: 123 RACALDFSKDWERCLPYAEFSHNNSFQASLKMSPN 157


>01_06_1594 + 38509676-38509776,38509808-38510096
          Length = 129

 Score = 28.3 bits (60), Expect = 9.2
 Identities = 24/76 (31%), Positives = 33/76 (43%), Gaps = 4/76 (5%)
 Frame = +2

Query: 434 EEENASNERGNGKI*GRVRGVPQTVASGNYAKRRS*VRXGCPEPTYPTAGGGPXEIRGAS 613
           EEE A  ++G G   GR         +G   +RR  +R     PT    GGG   +RG  
Sbjct: 58  EEEPALGKKGGGAS-GRE---DICTCTGEKRRRRRWIRLKAAAPTDAVRGGGGAGVRGER 113

Query: 614 RDR----QRQAVRGQP 649
           R R    + +A+  QP
Sbjct: 114 RRRSLREEDEALAAQP 129


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,791,520
Number of Sequences: 37544
Number of extensions: 472491
Number of successful extensions: 1139
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1094
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1138
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2670960720
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)