Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP15_F_D06
         (932 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z67738-4|CAJ43444.1|  279|Caenorhabditis elegans Hypothetical pr...    34   0.17 
Z67738-3|CAA91544.2|  332|Caenorhabditis elegans Hypothetical pr...    34   0.17 
Z46791-4|CAA86758.1|  317|Caenorhabditis elegans Hypothetical pr...    32   0.67 
AF016687-1|AAC48094.2|  315|Caenorhabditis elegans Dumpy : short...    31   1.6  
Z79694-6|CAB01958.1|  316|Caenorhabditis elegans Hypothetical pr...    30   2.1  
Z81050-3|CAB02849.1|  291|Caenorhabditis elegans Hypothetical pr...    29   6.3  
AL021448-3|CAA16275.1|  291|Caenorhabditis elegans Hypothetical ...    29   6.3  

>Z67738-4|CAJ43444.1|  279|Caenorhabditis elegans Hypothetical
           protein W03G11.1b protein.
          Length = 279

 Score = 33.9 bits (74), Expect = 0.17
 Identities = 27/89 (30%), Positives = 35/89 (39%), Gaps = 6/89 (6%)
 Frame = +2

Query: 554 CPE-PTYPTAGGGPXEIRGASRDRQRQAVRGQPGRR*I-----RANTPGAGXPHHMXDDP 715
           CPE P  P    GP    G + +  R  + G+PG R        +  PGA  P      P
Sbjct: 135 CPEAPAGPPGRPGPDGENGGAGEPGRDGLAGRPGARGSPGPRGPSGNPGADGPAGQL-GP 193

Query: 716 RCPPWXAPTVXXRXSSPHXSGPKYQPGGA 802
           +     AP+      +P   GPK  PG A
Sbjct: 194 QGGSNVAPSPAGEPGAPGAQGPKGPPGAA 222


>Z67738-3|CAA91544.2|  332|Caenorhabditis elegans Hypothetical
           protein W03G11.1a protein.
          Length = 332

 Score = 33.9 bits (74), Expect = 0.17
 Identities = 27/89 (30%), Positives = 35/89 (39%), Gaps = 6/89 (6%)
 Frame = +2

Query: 554 CPE-PTYPTAGGGPXEIRGASRDRQRQAVRGQPGRR*I-----RANTPGAGXPHHMXDDP 715
           CPE P  P    GP    G + +  R  + G+PG R        +  PGA  P      P
Sbjct: 188 CPEAPAGPPGRPGPDGENGGAGEPGRDGLAGRPGARGSPGPRGPSGNPGADGPAGQL-GP 246

Query: 716 RCPPWXAPTVXXRXSSPHXSGPKYQPGGA 802
           +     AP+      +P   GPK  PG A
Sbjct: 247 QGGSNVAPSPAGEPGAPGAQGPKGPPGAA 275


>Z46791-4|CAA86758.1|  317|Caenorhabditis elegans Hypothetical
           protein C09G5.5 protein.
          Length = 317

 Score = 31.9 bits (69), Expect = 0.67
 Identities = 26/79 (32%), Positives = 30/79 (37%), Gaps = 1/79 (1%)
 Frame = +2

Query: 563 PTYPTAGGGPXEIRGASRDRQRQAVRGQPGRR*IRANTPG-AGXPHHMXDDPRCPPWXAP 739
           P       GP    GAS DR    + GQPG    +   PG AG  HH   +    P  AP
Sbjct: 84  PQASNCPAGPPGPPGASGDR---GLDGQPGPAG-KPGQPGVAGPAHHQQQECIKCPQGAP 139

Query: 740 TVXXRXSSPHXSGPKYQPG 796
                  +P   GP   PG
Sbjct: 140 GPAGAPGNPGPQGPNGNPG 158


>AF016687-1|AAC48094.2|  315|Caenorhabditis elegans Dumpy : shorter
           than wild-typeprotein 9 protein.
          Length = 315

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 18/57 (31%), Positives = 23/57 (40%)
 Frame = +2

Query: 572 PTAGGGPXEIRGASRDRQRQAVRGQPGRR*IRANTPGAGXPHHMXDDPRCPPWXAPT 742
           PT   GP  + G    R    + G+PGR     N PG   P  +  +P  P    PT
Sbjct: 141 PTGAPGPPGLPGPKGPRGPAGIEGKPGRL-GEDNRPGPPGPPGVRGEPGSPGEKGPT 196


>Z79694-6|CAB01958.1|  316|Caenorhabditis elegans Hypothetical
           protein C15A11.6 protein.
          Length = 316

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 42/152 (27%), Positives = 56/152 (36%), Gaps = 2/152 (1%)
 Frame = +2

Query: 347 LISV*AFDFNTKVNQN-DDKHAARNDFRRFEEENASNERGNGKI*GRVRGVPQTVASGNY 523
           LISV  F   + +N   +D H    +F+ F  + A N   N      VR + ++V     
Sbjct: 22  LISV--FHIYSDINSFVEDSHRELGEFKGFAND-AWNSMINQD--DSVR-MARSVFGRRR 75

Query: 524 AKRRS*VRXGCPEPTYPTAGGGPXEIRGASRDRQRQAVRGQPGRR*IRANTPG-AGXPHH 700
            K++S    G      P    GP    GAS D+      GQ G+       PG AG  HH
Sbjct: 76  QKKQSQCNCGQQASNCPAGPPGPP---GASGDKGHDGQPGQAGK----PGQPGVAGPSHH 128

Query: 701 MXDDPRCPPWXAPTVXXRXSSPHXSGPKYQPG 796
              +    P   P        P   GP   PG
Sbjct: 129 QKQECIKCPQGLPGPAGAPGQPGPKGPNGNPG 160


>Z81050-3|CAB02849.1|  291|Caenorhabditis elegans Hypothetical
           protein C50B6.4 protein.
          Length = 291

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 31/122 (25%), Positives = 42/122 (34%), Gaps = 2/122 (1%)
 Frame = +2

Query: 437 EENASNERG--NGKI*GRVRGVPQTVASGNYAKRRS*VRXGCPEPTYPTAGGGPXEIRGA 610
           +E   NERG  +G +  R R  P  +  G   ++      G      P    GP    GA
Sbjct: 44  DEFKLNERGAWHGMV-ERTRA-PSEILFGRAKRQAGQCNCGAQSSGCPAGPPGPPGAPGA 101

Query: 611 SRDRQRQAVRGQPGRR*IRANTPGAGXPHHMXDDPRCPPWXAPTVXXRXSSPHXSGPKYQ 790
             D       G+PG   +       G P       +CP    P       +P  +GP  Q
Sbjct: 102 PGDDGHAGEAGKPGTAGVAVGIVSEGGP-----CIKCPA-GEPGPAGEAGAPGPAGPDGQ 155

Query: 791 PG 796
           PG
Sbjct: 156 PG 157


>AL021448-3|CAA16275.1|  291|Caenorhabditis elegans Hypothetical
           protein Y2H9A.3 protein.
          Length = 291

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 31/122 (25%), Positives = 42/122 (34%), Gaps = 2/122 (1%)
 Frame = +2

Query: 437 EENASNERG--NGKI*GRVRGVPQTVASGNYAKRRS*VRXGCPEPTYPTAGGGPXEIRGA 610
           +E   NERG  +G +  R R  P  +  G   ++      G      P    GP    GA
Sbjct: 44  DEFKLNERGAWHGMV-ERTRA-PSEILFGRAKRQAGQCNCGAQSSGCPAGPPGPPGAPGA 101

Query: 611 SRDRQRQAVRGQPGRR*IRANTPGAGXPHHMXDDPRCPPWXAPTVXXRXSSPHXSGPKYQ 790
             D       G+PG   +       G P       +CP    P       +P  +GP  Q
Sbjct: 102 PGDDGHAGEAGKPGTAGVAVGIVSEGGP-----CIKCPA-GEPGPAGEAGAPGPAGPDGQ 155

Query: 791 PG 796
           PG
Sbjct: 156 PG 157


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,053,220
Number of Sequences: 27780
Number of extensions: 357214
Number of successful extensions: 877
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 828
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 875
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2402214122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)