Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP15_F_D01
         (1097 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       27   0.22 
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    26   0.30 
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    25   1.2  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    25   1.2  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    25   1.6  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              24   2.7  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    23   3.6  

>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 27.5 bits (58), Expect = 0.22
 Identities = 18/54 (33%), Positives = 19/54 (35%), Gaps = 1/54 (1%)
 Frame = +3

Query: 792 GAPXXXSXPXQTXXXPS-PPPPPPXXXPPTXXXXPPXPPPXPPPXPPXXXXXXP 950
           GAP     P Q+   P    PP P   PP     P  PP  PP   P      P
Sbjct: 19  GAPGPQPSPHQSPQAPQRGSPPNPSQGPP-----PGGPPGAPPSQNPSQMMISP 67



 Score = 23.8 bits (49), Expect = 2.7
 Identities = 13/41 (31%), Positives = 13/41 (31%)
 Frame = +3

Query: 894  PXPPPXPPPXPPXXXXXXPXPXPXXPPXXXXPPPXPXXXPP 1016
            P P P P   P       P P P   P    PP  P    P
Sbjct: 21   PGPQPSPHQSPQAPQRGSP-PNPSQGPPPGGPPGAPPSQNP 60


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 25.8 bits (54), Expect = 0.68
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +3

Query: 825 TXXXPSPPPPPPXXXPP 875
           T   P+PPPPPP    P
Sbjct: 337 TPPKPAPPPPPPSSSGP 353



 Score = 22.6 bits (46), Expect(2) = 0.30
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = +3

Query: 891 PPXPPPXPPP 920
           PP P P PPP
Sbjct: 338 PPKPAPPPPP 347



 Score = 22.6 bits (46), Expect = 6.3
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = +1

Query: 892 PXPXPPPPXP 921
           P P PPPP P
Sbjct: 339 PKPAPPPPPP 348



 Score = 22.6 bits (46), Expect(2) = 0.30
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = +3

Query: 900 PPPXPPPXPP 929
           P P PPP PP
Sbjct: 339 PKPAPPPPPP 348


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 25.0 bits (52), Expect = 1.2
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -1

Query: 398 WPPLPENFKENFFPFLGVP 342
           W PLPEN KE+   +   P
Sbjct: 19  WKPLPENLKEDLIVYQVYP 37


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 25.0 bits (52), Expect = 1.2
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -1

Query: 398 WPPLPENFKENFFPFLGVP 342
           W PLPEN KE+   +   P
Sbjct: 19  WKPLPENLKEDLIVYQVYP 37


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 24.6 bits (51), Expect = 1.6
 Identities = 14/28 (50%), Positives = 14/28 (50%)
 Frame = -2

Query: 919 GGGXGGGXGGXXXXVGGXXXGGGGGGEG 836
           GG   G  GG    V G   GGGGGG G
Sbjct: 28  GGVVTGASGGSI--VVGANNGGGGGGLG 53


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 23.8 bits (49), Expect = 2.7
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = +3

Query: 837  PSPPPPPP 860
            P PPPPPP
Sbjct: 1857 PEPPPPPP 1864


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 23.4 bits (48), Expect = 3.6
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = +3

Query: 837  PSPPPPPP 860
            P PPPPPP
Sbjct: 1355 PPPPPPPP 1362


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 262,803
Number of Sequences: 438
Number of extensions: 12606
Number of successful extensions: 49
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44
length of database: 146,343
effective HSP length: 59
effective length of database: 120,501
effective search space used: 36873306
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)