Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP15_F_C20
         (860 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U37429-15|AAN63412.1|  195|Caenorhabditis elegans Peroxiredoxin ...   202   3e-52
Z32683-2|CAA83619.1|  226|Caenorhabditis elegans Hypothetical pr...   192   3e-49
AC024761-15|AAM97968.1|  231|Caenorhabditis elegans Hypothetical...    52   4e-07
U64846-1|AAG24113.2|  352|Caenorhabditis elegans Serpentine rece...    29   5.6  
U11279-3|AAF99909.1|  423|Caenorhabditis elegans T box family pr...    29   5.6  
AC024847-6|AAF60855.1|  909|Caenorhabditis elegans Patched relat...    29   5.6  
AF016684-10|AAB66205.1|  340|Caenorhabditis elegans Hypothetical...    28   7.4  
Z66564-6|CAA91473.4|  737|Caenorhabditis elegans Hypothetical pr...    28   9.8  
AY887904-1|AAX34416.1|  737|Caenorhabditis elegans anion transpo...    28   9.8  

>U37429-15|AAN63412.1|  195|Caenorhabditis elegans Peroxiredoxin
           protein 2 protein.
          Length = 195

 Score =  202 bits (493), Expect = 3e-52
 Identities = 94/138 (68%), Positives = 110/138 (79%)
 Frame = +2

Query: 359 KESTLLFFFYPLDFTFVCPTEILAFSERIEEFRKINTEVVACSVDSHFTHLAWINTPRKE 538
           K   ++ FFYPLDFTFVCPTEI+AFS+R EEF+ INT V+A S DS F+HLAWIN PRK 
Sbjct: 32  KGKYVVLFFYPLDFTFVCPTEIIAFSDRAEEFKAINTVVLAASTDSVFSHLAWINQPRKH 91

Query: 539 GGLGKINIPLLSDLTHSIAKDYGVYLEDLGHTLRGLFIIDDKGILRQITMNDLPVXRSVD 718
           GGLG++NIP+L+D  H I++DYGV  ED G   RGLFIID    LRQIT+NDLPV RSVD
Sbjct: 92  GGLGEMNIPVLADTNHQISRDYGVLKEDEGIAFRGLFIIDPSQNLRQITINDLPVGRSVD 151

Query: 719 ETLRLVQAFQYTDNHGEV 772
           ETLRLVQAFQ+ + HGEV
Sbjct: 152 ETLRLVQAFQFVEKHGEV 169



 Score = 53.6 bits (123), Expect = 2e-07
 Identities = 24/49 (48%), Positives = 33/49 (67%)
 Frame = +1

Query: 268 TKAMISKPAPEWEATAVVNGEFTQLSLSSFKGKYLVIFLLSPGFYIRMP 414
           +KA I KPAP+++  AVV+GEF  +SLS +KGKY+V+F     F    P
Sbjct: 2   SKAFIGKPAPQFKTQAVVDGEFVDVSLSDYKGKYVVLFFYPLDFTFVCP 50



 Score = 33.5 bits (73), Expect = 0.20
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = +1

Query: 772 CPAXWKPGXDTIIPNPSXKKKYFE 843
           CPA W PG DTI P     ++YF+
Sbjct: 170 CPAGWTPGSDTIKPGVKESQEYFK 193


>Z32683-2|CAA83619.1|  226|Caenorhabditis elegans Hypothetical
           protein R07E5.2 protein.
          Length = 226

 Score =  192 bits (468), Expect = 3e-49
 Identities = 85/138 (61%), Positives = 107/138 (77%)
 Frame = +2

Query: 359 KESTLLFFFYPLDFTFVCPTEILAFSERIEEFRKINTEVVACSVDSHFTHLAWINTPRKE 538
           K   L+ FFYPLDFTFVCPTEI+A+ +R  EFR +  EVVACS DSHF+HLAW+NTPRK+
Sbjct: 61  KGKWLVMFFYPLDFTFVCPTEIIAYGDRANEFRSLGAEVVACSCDSHFSHLAWVNTPRKD 120

Query: 539 GGLGKINIPLLSDLTHSIAKDYGVYLEDLGHTLRGLFIIDDKGILRQITMNDLPVXRSVD 718
           GGLG ++IPLL+D    IA  +GV  ++ G + RGLF+ID  G +R  T NDLPV RSVD
Sbjct: 121 GGLGDMDIPLLADFNKKIADSFGVLDKESGLSYRGLFLIDPSGTVRHTTCNDLPVGRSVD 180

Query: 719 ETLRLVQAFQYTDNHGEV 772
           ETLR+++AFQ++D HGEV
Sbjct: 181 ETLRVLKAFQFSDKHGEV 198



 Score = 34.7 bits (76), Expect = 0.086
 Identities = 16/40 (40%), Positives = 24/40 (60%)
 Frame = +1

Query: 295 PEWEATAVVNGEFTQLSLSSFKGKYLVIFLLSPGFYIRMP 414
           P ++ TAVV+G+F  +S   +KGK+LV+F     F    P
Sbjct: 40  PAFKGTAVVDGDFKVISDQDYKGKWLVMFFYPLDFTFVCP 79


>AC024761-15|AAM97968.1|  231|Caenorhabditis elegans Hypothetical
           protein Y38C1AA.11 protein.
          Length = 231

 Score = 52.4 bits (120), Expect = 4e-07
 Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 4/87 (4%)
 Frame = +2

Query: 362 ESTLLFFFYPLDFTFVCPTEILAFSERIEEFRKINTEVVACSVDSHFTHLAW---INTPR 532
           E  L+ F +P DFT VC TE+    +   EFRK + +++A S+DS  TH  W   IN+  
Sbjct: 28  EQWLMLFSHPADFTPVCTTELAELVKLAPEFRKRHVQILAISIDSSETHRDWAKDINSVA 87

Query: 533 KEGGLGK-INIPLLSDLTHSIAKDYGV 610
           +    G  +   +++D   SI  + G+
Sbjct: 88  QLSNCGSHLPFEIIADTDRSICTELGM 114


>U64846-1|AAG24113.2|  352|Caenorhabditis elegans Serpentine
           receptor, class t protein3 protein.
          Length = 352

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 15/43 (34%), Positives = 20/43 (46%)
 Frame = +3

Query: 306 GYCCS*WRVHSTFVIKFQRKVPCYFSSIPWILHSYALRKFWPS 434
           GY  S W   S   I  Q  V C+F  +  I+H+Y    + PS
Sbjct: 225 GYSTSMWLYKSKRQIILQGVVLCFFHGVTGIIHAYMQYFYSPS 267


>U11279-3|AAF99909.1|  423|Caenorhabditis elegans T box family
           protein 2 protein.
          Length = 423

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 16/31 (51%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
 Frame = -1

Query: 242 RAPPGKTLPLP-NE*HESPSKSEDEQVITLK 153
           ++PPGKT  LP +  H S S SED++  TLK
Sbjct: 264 QSPPGKTASLPTHSPHPSESNSEDDEP-TLK 293


>AC024847-6|AAF60855.1|  909|Caenorhabditis elegans Patched related
           family protein 21 protein.
          Length = 909

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 15/33 (45%), Positives = 19/33 (57%)
 Frame = +2

Query: 365 STLLFFFYPLDFTFVCPTEILAFSERIEEFRKI 463
           S LL + Y L  TF CP  +L  SER+ E  K+
Sbjct: 434 SLLLAYVYTL--TFFCPVLVLLLSERVNEPSKL 464


>AF016684-10|AAB66205.1|  340|Caenorhabditis elegans Hypothetical
           protein F45C12.6 protein.
          Length = 340

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 10/29 (34%), Positives = 20/29 (68%)
 Frame = +1

Query: 85  FNKELYYNFNIMKNMLFIIITVLLSVMTC 171
           ++ + Y+N ++M+N+LFI++ V L    C
Sbjct: 301 YSSDGYFNRDVMRNILFILVGVWLHNTAC 329


>Z66564-6|CAA91473.4|  737|Caenorhabditis elegans Hypothetical
           protein F52D10.1 protein.
          Length = 737

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 17/55 (30%), Positives = 24/55 (43%)
 Frame = +2

Query: 419 EILAFSERIEEFRKINTEVVACSVDSHFTHLAWINTPRKEGGLGKINIPLLSDLT 583
           E+L  +ER+E  R   TEV       H    A I+       +  I + L SDL+
Sbjct: 3   ELLCRTERVEHARNFKTEVRGLMDVDHLIERACIHRNMNHSHIHTILLSLFSDLS 57


>AY887904-1|AAX34416.1|  737|Caenorhabditis elegans anion
           transporter ABTS-2 protein.
          Length = 737

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 17/55 (30%), Positives = 24/55 (43%)
 Frame = +2

Query: 419 EILAFSERIEEFRKINTEVVACSVDSHFTHLAWINTPRKEGGLGKINIPLLSDLT 583
           E+L  +ER+E  R   TEV       H    A I+       +  I + L SDL+
Sbjct: 3   ELLCRTERVEHARNFKTEVRGLMDVDHLIERACIHRNMNHSHIHTILLSLFSDLS 57


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,129,983
Number of Sequences: 27780
Number of extensions: 377939
Number of successful extensions: 872
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 842
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 872
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2150453690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)