Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP15_F_C20
(860 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB208107-1|BAE72139.1| 71|Apis mellifera Broad complex zinc fi... 25 0.68
DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex det... 23 3.6
DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex det... 23 3.6
DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex det... 23 3.6
DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex det... 23 3.6
DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex det... 23 3.6
DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex det... 23 3.6
DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex det... 23 3.6
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 23 3.6
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 22 6.3
AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 22 8.4
AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase ... 22 8.4
AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase ... 22 8.4
>AB208107-1|BAE72139.1| 71|Apis mellifera Broad complex zinc
finger domain-Z2 isoform protein.
Length = 71
Score = 25.4 bits (53), Expect = 0.68
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +2
Query: 434 SERIEEFRKINTEVVACSVDSHFTHL 511
+ER EE+R + E V CS +S TH+
Sbjct: 30 AERQEEYRCVICERVYCSRNSLMTHI 55
>DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 23.0 bits (47), Expect = 3.6
Identities = 7/15 (46%), Positives = 12/15 (80%)
Frame = +1
Query: 85 FNKELYYNFNIMKNM 129
+NK+LYYN N ++ +
Sbjct: 102 YNKKLYYNINYIEQI 116
>DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 23.0 bits (47), Expect = 3.6
Identities = 7/15 (46%), Positives = 12/15 (80%)
Frame = +1
Query: 85 FNKELYYNFNIMKNM 129
+NK+LYYN N ++ +
Sbjct: 102 YNKKLYYNINYIEQI 116
>DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 23.0 bits (47), Expect = 3.6
Identities = 7/15 (46%), Positives = 12/15 (80%)
Frame = +1
Query: 85 FNKELYYNFNIMKNM 129
+NK+LYYN N ++ +
Sbjct: 104 YNKKLYYNINYIEQI 118
>DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.0 bits (47), Expect = 3.6
Identities = 7/15 (46%), Positives = 12/15 (80%)
Frame = +1
Query: 85 FNKELYYNFNIMKNM 129
+NK+LYYN N ++ +
Sbjct: 104 YNKKLYYNINYIEQI 118
>DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.0 bits (47), Expect = 3.6
Identities = 7/15 (46%), Positives = 12/15 (80%)
Frame = +1
Query: 85 FNKELYYNFNIMKNM 129
+NK+LYYN N ++ +
Sbjct: 104 YNKKLYYNINYIEQI 118
>DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.0 bits (47), Expect = 3.6
Identities = 7/15 (46%), Positives = 12/15 (80%)
Frame = +1
Query: 85 FNKELYYNFNIMKNM 129
+NK+LYYN N ++ +
Sbjct: 104 YNKKLYYNINYIEQI 118
>DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.0 bits (47), Expect = 3.6
Identities = 7/15 (46%), Positives = 12/15 (80%)
Frame = +1
Query: 85 FNKELYYNFNIMKNM 129
+NK+LYYN N ++ +
Sbjct: 104 YNKKLYYNINYIEQI 118
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 23.0 bits (47), Expect = 3.6
Identities = 7/15 (46%), Positives = 12/15 (80%)
Frame = +1
Query: 85 FNKELYYNFNIMKNM 129
+NK+LYYN N ++ +
Sbjct: 340 YNKKLYYNINYIEQI 354
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 22.2 bits (45), Expect = 6.3
Identities = 7/18 (38%), Positives = 10/18 (55%)
Frame = -2
Query: 238 LHPEKHYHFQTSNTNHHQ 185
+H H+H + T HHQ
Sbjct: 426 IHATPHHHHSHAATPHHQ 443
>AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 21.8 bits (44), Expect = 8.4
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = +1
Query: 88 NKELYYNFNIMKNM 129
NK+LYYN N ++ +
Sbjct: 323 NKKLYYNINYIEQI 336
>AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase
protein.
Length = 492
Score = 21.8 bits (44), Expect = 8.4
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = -3
Query: 564 GMLIFPKPPSLRGVFI 517
G+L FP P++ G+F+
Sbjct: 341 GILGFPSAPTIDGIFL 356
>AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase
protein.
Length = 628
Score = 21.8 bits (44), Expect = 8.4
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = -3
Query: 564 GMLIFPKPPSLRGVFI 517
G+L FP P++ G+F+
Sbjct: 341 GILGFPSAPTIDGIFL 356
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 219,211
Number of Sequences: 438
Number of extensions: 4466
Number of successful extensions: 19
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27795333
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -