Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP15_F_C17
(959 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC117407-1|AAI17408.1| 1081|Homo sapiens LOC152485 protein protein. 33 2.0
BC038446-1|AAH38446.1| 673|Homo sapiens SF1 protein protein. 33 2.0
AK091130-1|BAC03591.1| 1077|Homo sapiens protein ( Homo sapiens ... 33 2.0
BC100972-1|AAI00973.1| 172|Homo sapiens similar to Williams Beu... 32 2.7
BC056606-1|AAH56606.1| 549|Homo sapiens MGC57359 protein protein. 32 2.7
AK127078-1|BAC86815.1| 844|Homo sapiens protein ( Homo sapiens ... 31 6.2
Z74615-1|CAA98968.1| 1464|Homo sapiens prepro-alpha1(I) collagen... 31 8.2
X56597-1|CAA39935.1| 321|Homo sapiens fibrillarin protein. 31 8.2
M59849-1|AAA52453.1| 321|Homo sapiens fibrillarin protein. 31 8.2
K01228-1|AAA51995.1| 1040|Homo sapiens COL1A1 protein. 31 8.2
CR457069-1|CAG33350.1| 321|Homo sapiens FBL protein. 31 8.2
BT020144-1|AAV38946.1| 321|Homo sapiens fibrillarin protein. 31 8.2
BT006830-1|AAP35476.1| 321|Homo sapiens fibrillarin protein. 31 8.2
BC036531-1|AAH36531.1| 1464|Homo sapiens collagen, type I, alpha... 31 8.2
BC019260-1|AAH19260.1| 321|Homo sapiens fibrillarin protein. 31 8.2
AF017178-1|AAB94054.2| 1461|Homo sapiens pro alpha 1(I) collagen... 31 8.2
AC006950-1|AAD15623.1| 227|Homo sapiens FBRL_HUMAN [AA 1- 227] ... 31 8.2
AC005393-3|AAC28913.1| 318|Homo sapiens FBRL_HUMAN protein. 31 8.2
AB209597-1|BAD92834.1| 1467|Homo sapiens Collagen alpha 1 chain ... 31 8.2
>BC117407-1|AAI17408.1| 1081|Homo sapiens LOC152485 protein protein.
Length = 1081
Score = 32.7 bits (71), Expect = 2.0
Identities = 16/41 (39%), Positives = 17/41 (41%)
Frame = +3
Query: 786 PPREKXXXLFGPPXPXPPPXDXPXPRPSRXXXTXFXPXPXG 908
PP EK PP P PPP P P P + P P G
Sbjct: 318 PPSEKKPEKVTPPPPPPPP--PPPPPPPQSLELLLLPVPKG 356
>BC038446-1|AAH38446.1| 673|Homo sapiens SF1 protein protein.
Length = 673
Score = 32.7 bits (71), Expect = 2.0
Identities = 18/56 (32%), Positives = 20/56 (35%), Gaps = 5/56 (8%)
Frame = +3
Query: 786 PPREKXXXLFGPPXPXPPPX-----DXPXPRPSRXXXTXFXPXPXGGXXXFPXTXR 938
PP + PP P PPP P P P + P P GG FP R
Sbjct: 87 PPPPSPGASYPPPQPPPPPPLYQRVSPPQPPPPQPPRKDQQPGPAGGGGDFPSKKR 142
>AK091130-1|BAC03591.1| 1077|Homo sapiens protein ( Homo sapiens
cDNA FLJ33811 fis, clone CTONG2002095. ).
Length = 1077
Score = 32.7 bits (71), Expect = 2.0
Identities = 16/41 (39%), Positives = 17/41 (41%)
Frame = +3
Query: 786 PPREKXXXLFGPPXPXPPPXDXPXPRPSRXXXTXFXPXPXG 908
PP EK PP P PPP P P P + P P G
Sbjct: 318 PPSEKKPEKVTPPPPPPPP--PPPPPPPQSLELLLLPVPKG 356
>BC100972-1|AAI00973.1| 172|Homo sapiens similar to Williams Beuren
syndrome chromosome region 19 protein.
Length = 172
Score = 32.3 bits (70), Expect = 2.7
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = -3
Query: 159 EADSQQDNQQLVHFGYLRTSSRIGYKNHHWLFLCRSPPLN 40
E D + Q++ +F Y +T S I + HW LCR P+N
Sbjct: 79 EEDDEAPKQKIFYFLYGKTHSHIPLRPKHWFQLCR--PMN 116
>BC056606-1|AAH56606.1| 549|Homo sapiens MGC57359 protein protein.
Length = 549
Score = 32.3 bits (70), Expect = 2.7
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = -3
Query: 159 EADSQQDNQQLVHFGYLRTSSRIGYKNHHWLFLCRSPPLN 40
E D + Q++ +F Y +T S I + HW LCR P+N
Sbjct: 456 EEDDEAPKQKIFYFLYGKTHSHIPLRPKHWFQLCR--PMN 493
>AK127078-1|BAC86815.1| 844|Homo sapiens protein ( Homo sapiens
cDNA FLJ45135 fis, clone BRAWH3038252, highly similar
to Formin 1 isoform IV. ).
Length = 844
Score = 31.1 bits (67), Expect = 6.2
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = +3
Query: 816 GPPXPXPPPXDXPXPRPSRXXXTXFXPXP 902
GPP P PPP P P PS P P
Sbjct: 325 GPPLPPPPPPPPPLPPPSSAGPPPPPPPP 353
>Z74615-1|CAA98968.1| 1464|Homo sapiens prepro-alpha1(I) collagen
protein.
Length = 1464
Score = 30.7 bits (66), Expect = 8.2
Identities = 17/41 (41%), Positives = 17/41 (41%)
Frame = +2
Query: 782 PPPPRKXXXXFWPPXXXSPPXGXPXPPXLXXAGXXFSXXPQ 904
PP PR P PP G P PP AG FS PQ
Sbjct: 1164 PPGPRGRTGDAGPVGPPGPP-GPPGPPGPPSAGFDFSFLPQ 1203
>X56597-1|CAA39935.1| 321|Homo sapiens fibrillarin protein.
Length = 321
Score = 30.7 bits (66), Expect = 8.2
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = -2
Query: 865 GRGXGXSXGGGXGXGGPKXXXXFSRGG 785
GRG G GGG G GG + F GG
Sbjct: 42 GRGRGGGGGGGGGGGGGRGGGGFHSGG 68
>M59849-1|AAA52453.1| 321|Homo sapiens fibrillarin protein.
Length = 321
Score = 30.7 bits (66), Expect = 8.2
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = -2
Query: 865 GRGXGXSXGGGXGXGGPKXXXXFSRGG 785
GRG G GGG G GG + F GG
Sbjct: 42 GRGRGGGGGGGGGGGGGRGGGGFHSGG 68
>K01228-1|AAA51995.1| 1040|Homo sapiens COL1A1 protein.
Length = 1040
Score = 30.7 bits (66), Expect = 8.2
Identities = 17/41 (41%), Positives = 17/41 (41%)
Frame = +2
Query: 782 PPPPRKXXXXFWPPXXXSPPXGXPXPPXLXXAGXXFSXXPQ 904
PP PR P PP G P PP AG FS PQ
Sbjct: 740 PPGPRGRTGDAGPVGPPGPP-GPPGPPGPPSAGFDFSFLPQ 779
>CR457069-1|CAG33350.1| 321|Homo sapiens FBL protein.
Length = 321
Score = 30.7 bits (66), Expect = 8.2
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = -2
Query: 865 GRGXGXSXGGGXGXGGPKXXXXFSRGG 785
GRG G GGG G GG + F GG
Sbjct: 42 GRGRGGGGGGGGGGGGGRGGGGFHSGG 68
>BT020144-1|AAV38946.1| 321|Homo sapiens fibrillarin protein.
Length = 321
Score = 30.7 bits (66), Expect = 8.2
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = -2
Query: 865 GRGXGXSXGGGXGXGGPKXXXXFSRGG 785
GRG G GGG G GG + F GG
Sbjct: 42 GRGRGGGGGGGGGGGGGRGGGGFHSGG 68
>BT006830-1|AAP35476.1| 321|Homo sapiens fibrillarin protein.
Length = 321
Score = 30.7 bits (66), Expect = 8.2
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = -2
Query: 865 GRGXGXSXGGGXGXGGPKXXXXFSRGG 785
GRG G GGG G GG + F GG
Sbjct: 42 GRGRGGGGGGGGGGGGGRGGGGFHSGG 68
>BC036531-1|AAH36531.1| 1464|Homo sapiens collagen, type I, alpha 1
protein.
Length = 1464
Score = 30.7 bits (66), Expect = 8.2
Identities = 17/41 (41%), Positives = 17/41 (41%)
Frame = +2
Query: 782 PPPPRKXXXXFWPPXXXSPPXGXPXPPXLXXAGXXFSXXPQ 904
PP PR P PP G P PP AG FS PQ
Sbjct: 1164 PPGPRGRTGDAGPVGPPGPP-GPPGPPGPPSAGFDFSFLPQ 1203
>BC019260-1|AAH19260.1| 321|Homo sapiens fibrillarin protein.
Length = 321
Score = 30.7 bits (66), Expect = 8.2
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = -2
Query: 865 GRGXGXSXGGGXGXGGPKXXXXFSRGG 785
GRG G GGG G GG + F GG
Sbjct: 42 GRGRGGGGGGGGGGGGGRGGGGFHSGG 68
>AF017178-1|AAB94054.2| 1461|Homo sapiens pro alpha 1(I) collagen
protein.
Length = 1461
Score = 30.7 bits (66), Expect = 8.2
Identities = 17/41 (41%), Positives = 17/41 (41%)
Frame = +2
Query: 782 PPPPRKXXXXFWPPXXXSPPXGXPXPPXLXXAGXXFSXXPQ 904
PP PR P PP G P PP AG FS PQ
Sbjct: 1161 PPGPRGRTGDAGPVGPPGPP-GPPGPPGPPSAGFDFSFLPQ 1200
>AC006950-1|AAD15623.1| 227|Homo sapiens FBRL_HUMAN [AA 1- 227]
protein.
Length = 227
Score = 30.7 bits (66), Expect = 8.2
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = -2
Query: 865 GRGXGXSXGGGXGXGGPKXXXXFSRGG 785
GRG G GGG G GG + F GG
Sbjct: 42 GRGRGGGGGGGGGGGGGRGGGGFHSGG 68
>AC005393-3|AAC28913.1| 318|Homo sapiens FBRL_HUMAN protein.
Length = 318
Score = 30.7 bits (66), Expect = 8.2
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = -2
Query: 865 GRGXGXSXGGGXGXGGPKXXXXFSRGG 785
GRG G GGG G GG + F GG
Sbjct: 39 GRGRGGGGGGGGGGGGGRGGGGFHSGG 65
>AB209597-1|BAD92834.1| 1467|Homo sapiens Collagen alpha 1 chain
precursor variant protein.
Length = 1467
Score = 30.7 bits (66), Expect = 8.2
Identities = 17/41 (41%), Positives = 17/41 (41%)
Frame = +2
Query: 782 PPPPRKXXXXFWPPXXXSPPXGXPXPPXLXXAGXXFSXXPQ 904
PP PR P PP G P PP AG FS PQ
Sbjct: 1167 PPGPRGRTGDAGPVGPPGPP-GPPGPPGPPSAGFDFSFLPQ 1206
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,049,396
Number of Sequences: 237096
Number of extensions: 2128323
Number of successful extensions: 10913
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 5702
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9450
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12714176638
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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