Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP15_F_C17
(959 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z30317-2|CAA82968.2| 1142|Caenorhabditis elegans Hypothetical pr... 32 0.70
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 30 2.8
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 30 2.8
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 3.7
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 3.7
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 3.7
U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astaci... 29 4.9
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 29 6.5
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 29 6.5
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 29 6.5
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 28 8.6
Z67995-6|CAA91946.1| 2692|Caenorhabditis elegans Hypothetical pr... 28 8.6
Z67737-7|CAA91543.1| 2692|Caenorhabditis elegans Hypothetical pr... 28 8.6
>Z30317-2|CAA82968.2| 1142|Caenorhabditis elegans Hypothetical protein
T16G12.5 protein.
Length = 1142
Score = 31.9 bits (69), Expect = 0.70
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 4/60 (6%)
Frame = +1
Query: 193 PKEDNSINTLAESAKKTIEELREKVESALAP----ETVKKNFGTMVDSFNEFYKNLKPAE 360
P ED S N + AKK + +L+ V AP T ++ + VD NE+ + L E
Sbjct: 834 PSEDVSFNLAVDEAKKLLRDLKIDVNQVNAPTLPQRTDRQRYNQQVDVCNEWIEELHDDE 893
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 29.9 bits (64), Expect = 2.8
Identities = 11/29 (37%), Positives = 12/29 (41%)
Frame = +2
Query: 782 PPPPRKXXXXFWPPXXXSPPXGXPXPPXL 868
P PP WPP PP P PP +
Sbjct: 285 PRPPPPPSSGMWPPPPPPPPGRTPGPPGM 313
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 29.9 bits (64), Expect = 2.8
Identities = 11/29 (37%), Positives = 12/29 (41%)
Frame = +2
Query: 782 PPPPRKXXXXFWPPXXXSPPXGXPXPPXL 868
P PP WPP PP P PP +
Sbjct: 295 PRPPPPPSSGMWPPPPPPPPGRTPGPPGM 323
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.5 bits (63), Expect = 3.7
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = +2
Query: 782 PPPPRKXXXXFWPPXXXSPPXGXPXPP 862
PPPPR PP SPP G PP
Sbjct: 289 PPPPRAGSPPPPPPPRGSPPTGSLPPP 315
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.5 bits (63), Expect = 3.7
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = +2
Query: 782 PPPPRKXXXXFWPPXXXSPPXGXPXPP 862
PPPPR PP SPP G PP
Sbjct: 310 PPPPRAGSPPPPPPPRGSPPTGSLPPP 336
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.5 bits (63), Expect = 3.7
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = +2
Query: 782 PPPPRKXXXXFWPPXXXSPPXGXPXPP 862
PPPPR PP SPP G PP
Sbjct: 295 PPPPRAGSPPPPPPPRGSPPTGSLPPP 321
>U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astacin
protease protein33 protein.
Length = 644
Score = 29.1 bits (62), Expect = 4.9
Identities = 13/29 (44%), Positives = 13/29 (44%), Gaps = 2/29 (6%)
Frame = +2
Query: 782 PPPPRKXXXXFW--PPXXXSPPXGXPXPP 862
PPPP W PP PP G P PP
Sbjct: 55 PPPPWDRPPPPWRRPPWHRRPPWGLPPPP 83
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 28.7 bits (61), Expect = 6.5
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +3
Query: 816 GPPXPXPPPXDXPXPRP 866
GPP P PPP P P P
Sbjct: 757 GPPPPPPPPGGCPPPPP 773
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 28.7 bits (61), Expect = 6.5
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +3
Query: 816 GPPXPXPPPXDXPXPRP 866
GPP P PPP P P P
Sbjct: 757 GPPPPPPPPGGCPPPPP 773
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 28.7 bits (61), Expect = 6.5
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +3
Query: 816 GPPXPXPPPXDXPXPRP 866
GPP P PPP P P P
Sbjct: 340 GPPPPPPPPGGCPPPPP 356
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 28.3 bits (60), Expect = 8.6
Identities = 14/36 (38%), Positives = 15/36 (41%)
Frame = -3
Query: 861 GGXGXPWGGEXXXGGQKXKXXFRGGGGXFX*AGXKP 754
GG G +GG GG F G GG G KP
Sbjct: 833 GGRGGDFGGSGNFGGSGGGGSFGGSGGGGGFGGVKP 868
>Z67995-6|CAA91946.1| 2692|Caenorhabditis elegans Hypothetical
protein T01H10.8 protein.
Length = 2692
Score = 28.3 bits (60), Expect = 8.6
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = +1
Query: 199 EDNSINTLAESAKKTIEELREKVESALAPETVKKNFGTMVDSFNEFYKNLKPAEAPK 369
E++S L K TI + L + K FG ++D FN + NL+ ++ K
Sbjct: 125 EEDSQILLLRLLKTTISS-KSNYHHRLVLDECKVGFGMLIDDFNNGFNNLEKSDVRK 180
>Z67737-7|CAA91543.1| 2692|Caenorhabditis elegans Hypothetical
protein T01H10.8 protein.
Length = 2692
Score = 28.3 bits (60), Expect = 8.6
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = +1
Query: 199 EDNSINTLAESAKKTIEELREKVESALAPETVKKNFGTMVDSFNEFYKNLKPAEAPK 369
E++S L K TI + L + K FG ++D FN + NL+ ++ K
Sbjct: 125 EEDSQILLLRLLKTTISS-KSNYHHRLVLDECKVGFGMLIDDFNNGFNNLEKSDVRK 180
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,874,725
Number of Sequences: 27780
Number of extensions: 298177
Number of successful extensions: 1731
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1019
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1506
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2496624284
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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