Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP15_F_C16
         (922 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            24   2.2  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               23   5.2  
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    22   6.8  
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    22   9.0  

>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 23.8 bits (49), Expect = 2.2
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +2

Query: 650 QPIVVDWVTRSSSRQR 697
           QPI   W+TRS +R++
Sbjct: 81  QPISYKWITRSGTREQ 96


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 22.6 bits (46), Expect = 5.2
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +2

Query: 317 LALVMNHKPNWD 352
           LAL +NH PN+D
Sbjct: 658 LALWLNHSPNYD 669



 Score = 22.2 bits (45), Expect = 6.8
 Identities = 6/21 (28%), Positives = 14/21 (66%)
 Frame = +2

Query: 104 ILPKVSKNLRKWHPKLSSPPL 166
           +LPK++  + +W+P   + P+
Sbjct: 519 VLPKLTLEVEEWNPLTDTVPI 539


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 22.2 bits (45), Expect = 6.8
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = +3

Query: 348 GIVACTTISCWTNNQ 392
           G+V  T+++CW  N+
Sbjct: 318 GLVGDTSLACWNENR 332


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 21.8 bits (44), Expect = 9.0
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = +3

Query: 348 GIVACTTISCWTNNQ 392
           G+V+ T + CW  N+
Sbjct: 317 GLVSDTALGCWNENR 331


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 242,865
Number of Sequences: 438
Number of extensions: 4932
Number of successful extensions: 13
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29992872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)