Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP15_F_C14
         (866 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_05_0383 + 23656041-23656096,23657189-23657255,23657599-236577...    31   0.90 
01_06_0276 - 28084746-28085003,28085103-28085357,28085531-280857...    29   4.8  
05_07_0059 + 27402365-27402733,27402848-27402982,27403070-274031...    28   8.4  
02_02_0535 - 11292509-11294679,11294971-11295040,11295268-112953...    28   8.4  

>03_05_0383 +
           23656041-23656096,23657189-23657255,23657599-23657745,
           23658094-23658178,23658380-23658551,23660056-23660176,
           23660431-23660550,23660861-23661073,23661154-23661213,
           23661306-23661424,23661609-23661667,23661798-23662132
          Length = 517

 Score = 31.5 bits (68), Expect = 0.90
 Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
 Frame = -3

Query: 753 TPSLYSXLYMKNKTSLSYLAGCQGPLGLKSF-DAVDPVGHVVMVRGCSNCQRQI 595
           TP+ +   Y+   T L   AGC+ P+G   F   +D V H    R C  C R I
Sbjct: 160 TPATFMPPYIFPSTGLRVCAGCKTPIGQGRFLSCMDSVWHPQCFR-CFACDRPI 212


>01_06_0276 - 28084746-28085003,28085103-28085357,28085531-28085798,
            28085948-28086253,28086369-28086643,28087034-28087252,
            28087486-28089015,28089236-28089397,28089512-28089666,
            28090195-28091064,28091363-28091832,28091917-28091981,
            28092105-28092448,28092531-28092710,28092817-28092920,
            28093053-28093162,28093648-28093744,28094138-28094238,
            28094324-28094476,28094561-28094674,28094795-28094884,
            28094960-28095307
          Length = 2157

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 22/87 (25%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
 Frame = -3

Query: 684  GPLGLKSFDAVDPVGHVVMVRGCSNCQRQILITLSVHNLEVDLVVLPQRN-ELPADFWTR 508
            GP GL + D ++ +GH V V   ++ +   L+   V N++ D + + QR   L A+    
Sbjct: 1805 GPAGLAAADQLNKMGHFVTVFERAD-RIGGLMMYGVPNMKTDKIEIVQRRVNLMAEEGIT 1863

Query: 507  LVLAIAVGKSAIVAVLIVQRQSETVAL 427
             V+   VG   + ++  ++ +++ V L
Sbjct: 1864 FVVNANVGSDPLYSIERLRSENDAVIL 1890


>05_07_0059 + 27402365-27402733,27402848-27402982,27403070-27403183,
            27403297-27403449,27403544-27403644,27403945-27404041,
            27404542-27404651,27404775-27404878,27405129-27405308,
            27405398-27405741,27405841-27405905,27405981-27406450,
            27406939-27407793,27408045-27408116,27408475-27408575,
            27409069-27409170,27409295-27409456,27409665-27411230,
            27411384-27411602,27413924-27414198,27414291-27414596,
            27414727-27415012,27415085-27415087,27415162-27415416,
            27415537-27415803
          Length = 2236

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 22/87 (25%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
 Frame = -3

Query: 684  GPLGLKSFDAVDPVGHVVMVRGCSNCQRQILITLSVHNLEVDLVVLPQRN-ELPADFWTR 508
            GP GL + D ++ +GH V V   ++ +   L+   V N++ D   + QR  EL A    +
Sbjct: 1874 GPAGLAAADQLNKMGHFVTVFERAD-RIGGLMMYGVPNMKADKEGIVQRRVELMAKEGVQ 1932

Query: 507  LVLAIAVGKSAIVAVLIVQRQSETVAL 427
             ++   VG   + +V  ++ +++ + L
Sbjct: 1933 FIVNAHVGSDPLYSVEKLRSENDAIIL 1959


>02_02_0535 -
           11292509-11294679,11294971-11295040,11295268-11295324,
           11298629-11298789,11299123-11299156
          Length = 830

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = +1

Query: 583 QRNQYLTLAVRTTPNHNHMAYGVNS 657
           QR Q L+ + RT P +NH ++G N+
Sbjct: 790 QRKQLLSFSQRTVPVNNHSSHGSNN 814


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,825,972
Number of Sequences: 37544
Number of extensions: 379428
Number of successful extensions: 1283
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1242
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1283
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2432722788
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)