Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP15_F_C14
         (866 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ578034-1|CAE17326.1|  882|Homo sapiens chodroitin synthase 2 p...    31   5.4  
AJ504664-1|CAD43233.1|  573|Homo sapiens chondroitin synthase 2 ...    31   5.4  
AB175496-1|BAF47165.1|  882|Homo sapiens chondroitin synthase-2 ...    31   5.4  
AB086062-1|BAC98832.1|  882|Homo sapiens chondroitin sulfate syn...    31   5.4  
AB001601-1|BAA25908.1| 1041|Homo sapiens ATP-dependent RNA helic...    31   7.2  
X90840-1|CAA62346.1| 1690|Homo sapiens axonal transporter of syn...    30   9.5  
BC111799-1|AAI11800.1| 1690|Homo sapiens kinesin family member 1...    30   9.5  
BC111780-1|AAI11781.1| 1690|Homo sapiens kinesin family member 1...    30   9.5  
AC011298-1|AAX93239.1| 1690|Homo sapiens unknown protein.              30   9.5  
AB210029-1|BAE06111.1| 1478|Homo sapiens KIF1A variant protein p...    30   9.5  

>AJ578034-1|CAE17326.1|  882|Homo sapiens chodroitin synthase 2
           protein.
          Length = 882

 Score = 31.1 bits (67), Expect = 5.4
 Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 4/45 (8%)
 Frame = +2

Query: 110 ILCLFVASLYAN---ETSVSDSKLED-DLYNSILXCRLRPFR*KE 232
           I C++ + L      +TS+    LED DLYN ++   LRPFR +E
Sbjct: 782 ITCIYKSDLLGAGGFDTSIQGWGLEDVDLYNKVILSGLRPFRSQE 826


>AJ504664-1|CAD43233.1|  573|Homo sapiens chondroitin synthase 2
           protein.
          Length = 573

 Score = 31.1 bits (67), Expect = 5.4
 Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 4/45 (8%)
 Frame = +2

Query: 110 ILCLFVASLYAN---ETSVSDSKLED-DLYNSILXCRLRPFR*KE 232
           I C++ + L      +TS+    LED DLYN ++   LRPFR +E
Sbjct: 473 ITCIYKSDLLGAGGFDTSIQGWGLEDVDLYNKVILSGLRPFRSQE 517


>AB175496-1|BAF47165.1|  882|Homo sapiens chondroitin synthase-2
           protein.
          Length = 882

 Score = 31.1 bits (67), Expect = 5.4
 Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 4/45 (8%)
 Frame = +2

Query: 110 ILCLFVASLYAN---ETSVSDSKLED-DLYNSILXCRLRPFR*KE 232
           I C++ + L      +TS+    LED DLYN ++   LRPFR +E
Sbjct: 782 ITCIYKSDLLGAGGFDTSIQGWGLEDVDLYNKVILSGLRPFRSQE 826


>AB086062-1|BAC98832.1|  882|Homo sapiens chondroitin sulfate
           synthase protein.
          Length = 882

 Score = 31.1 bits (67), Expect = 5.4
 Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 4/45 (8%)
 Frame = +2

Query: 110 ILCLFVASLYAN---ETSVSDSKLED-DLYNSILXCRLRPFR*KE 232
           I C++ + L      +TS+    LED DLYN ++   LRPFR +E
Sbjct: 782 ITCIYKSDLLGAGGFDTSIQGWGLEDVDLYNKVILSGLRPFRSQE 826


>AB001601-1|BAA25908.1| 1041|Homo sapiens ATP-dependent RNA helicase
           #3 protein.
          Length = 1041

 Score = 30.7 bits (66), Expect = 7.2
 Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
 Frame = -3

Query: 561 DLVVLPQRNELPADFWTRLVLAIAVGKSAIVAVLIVQRQSETV-ALVHQLNVVFCEYKS 388
           +L+VLP    LP+D   R+      G   +V    +   S T+  +++ L+  FC+ KS
Sbjct: 641 ELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSPTIEGIIYVLDPGFCKQKS 699


>X90840-1|CAA62346.1| 1690|Homo sapiens axonal transporter of
           synaptic vesicles protein.
          Length = 1690

 Score = 30.3 bits (65), Expect = 9.5
 Identities = 23/70 (32%), Positives = 30/70 (42%), Gaps = 6/70 (8%)
 Frame = +3

Query: 168 NSKTIFTTASSXADYDHSVEKSKQIYEDKKSEVITNVV------NKLIRNNKMNCMEYAY 329
           NS+T    A S AD ++    S   Y D+  ++  N V      NKLIR  K        
Sbjct: 322 NSRTAMVAALSPADINYDETLSTLRYADRAKQIRCNAVINEDPNNKLIRELKDEVTRLRD 381

Query: 330 QLWLQGSKDI 359
            L+ QG  DI
Sbjct: 382 LLYAQGLGDI 391


>BC111799-1|AAI11800.1| 1690|Homo sapiens kinesin family member 1A
           protein.
          Length = 1690

 Score = 30.3 bits (65), Expect = 9.5
 Identities = 23/70 (32%), Positives = 30/70 (42%), Gaps = 6/70 (8%)
 Frame = +3

Query: 168 NSKTIFTTASSXADYDHSVEKSKQIYEDKKSEVITNVV------NKLIRNNKMNCMEYAY 329
           NS+T    A S AD ++    S   Y D+  ++  N V      NKLIR  K        
Sbjct: 322 NSRTAMVAALSPADINYDETLSTLRYADRAKQIRCNAVINEDPNNKLIRELKDEVTRLRD 381

Query: 330 QLWLQGSKDI 359
            L+ QG  DI
Sbjct: 382 LLYAQGLGDI 391


>BC111780-1|AAI11781.1| 1690|Homo sapiens kinesin family member 1A
           protein.
          Length = 1690

 Score = 30.3 bits (65), Expect = 9.5
 Identities = 23/70 (32%), Positives = 30/70 (42%), Gaps = 6/70 (8%)
 Frame = +3

Query: 168 NSKTIFTTASSXADYDHSVEKSKQIYEDKKSEVITNVV------NKLIRNNKMNCMEYAY 329
           NS+T    A S AD ++    S   Y D+  ++  N V      NKLIR  K        
Sbjct: 322 NSRTAMVAALSPADINYDETLSTLRYADRAKQIRCNAVINEDPNNKLIRELKDEVTRLRD 381

Query: 330 QLWLQGSKDI 359
            L+ QG  DI
Sbjct: 382 LLYAQGLGDI 391


>AC011298-1|AAX93239.1| 1690|Homo sapiens unknown protein.
          Length = 1690

 Score = 30.3 bits (65), Expect = 9.5
 Identities = 23/70 (32%), Positives = 30/70 (42%), Gaps = 6/70 (8%)
 Frame = +3

Query: 168 NSKTIFTTASSXADYDHSVEKSKQIYEDKKSEVITNVV------NKLIRNNKMNCMEYAY 329
           NS+T    A S AD ++    S   Y D+  ++  N V      NKLIR  K        
Sbjct: 322 NSRTAMVAALSPADINYDETLSTLRYADRAKQIRCNAVINEDPNNKLIRELKDEVTRLRD 381

Query: 330 QLWLQGSKDI 359
            L+ QG  DI
Sbjct: 382 LLYAQGLGDI 391


>AB210029-1|BAE06111.1| 1478|Homo sapiens KIF1A variant protein
           protein.
          Length = 1478

 Score = 30.3 bits (65), Expect = 9.5
 Identities = 23/70 (32%), Positives = 30/70 (42%), Gaps = 6/70 (8%)
 Frame = +3

Query: 168 NSKTIFTTASSXADYDHSVEKSKQIYEDKKSEVITNVV------NKLIRNNKMNCMEYAY 329
           NS+T    A S AD ++    S   Y D+  ++  N V      NKLIR  K        
Sbjct: 328 NSRTAMVAALSPADINYDETLSTLRYADRAKQIRCNAVINEDPNNKLIRELKDEVTRLRD 387

Query: 330 QLWLQGSKDI 359
            L+ QG  DI
Sbjct: 388 LLYAQGLGDI 397


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,586,430
Number of Sequences: 237096
Number of extensions: 2011097
Number of successful extensions: 5687
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5421
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5687
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 11095746082
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)