Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP15_F_C13
(884 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC26F1.03 |pda1||pyruvate dehydrogenase e1 component alpha sub... 202 5e-53
SPAC23H3.09c |gly1||threonine aldolase |Schizosaccharomyces pomb... 27 2.7
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 27 2.7
SPAC22F3.09c |res2|mcs1, pct1|MBF transcription factor complex s... 27 4.7
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 27 4.7
SPAC2F3.10 |||GARP complex subunit Vps54 |Schizosaccharomyces po... 27 4.7
SPAC23H4.14 |vam6|vps39|guanyl-nucleotide exchange factor Vma6|S... 27 4.7
SPAC26A3.09c |rga2||GTPase activating protein Rga2|Schizosacchar... 26 6.2
SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 26 8.2
>SPAC26F1.03 |pda1||pyruvate dehydrogenase e1 component alpha
subunit Pda1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 409
Score = 202 bits (493), Expect = 5e-53
Identities = 92/167 (55%), Positives = 120/167 (71%)
Frame = +1
Query: 367 HKLDQGPATSATLTSEDALKLYEQLTILRRIETASGNLYKEKIIRGFCHLYSGQEAVAVG 546
+K+D P+T +T + L LYE++ +RR+E A LYK K IRGFCHL GQEAVA G
Sbjct: 62 YKIDV-PSTEIEVTKGELLGLYEKMVTIRRLELACDALYKAKKIRGFCHLSIGQEAVAAG 120
Query: 547 MRAAMRDADSVITAYRCHGWTYLMGVSVLGVLSELTGRRTGCSRGKGGSMHLYGRNFYGG 726
+ A+ DS+IT+YRCHG+ Y G+S+ ++ EL GR+ G S+GKGGSMH++ +NFYGG
Sbjct: 121 IEGAITLDDSIITSYRCHGFAYTRGLSIRSIIGELMGRQCGASKGKGGSMHIFAKNFYGG 180
Query: 727 XGIVGAQVPLGAGVGLAHKYRADGGVPFALYGDGAANXGQLFQAYNM 867
GIVGAQ+PLGAG+G A KY FALYGDGA+N GQ F+A+NM
Sbjct: 181 NGIVGAQIPLGAGIGFAQKYLEKPTTTFALYGDGASNQGQAFEAFNM 227
>SPAC23H3.09c |gly1||threonine aldolase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 376
Score = 27.5 bits (58), Expect = 2.7
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = -1
Query: 503 PRMIFSLYRFPDAVSILRNIV 441
PR++F + PDAV IL+N++
Sbjct: 332 PRIVFHIQITPDAVEILKNVL 352
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 27.5 bits (58), Expect = 2.7
Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 6/76 (7%)
Frame = -1
Query: 842 PWLAAPSPYRANGTPPSAR-YLWARPTPAPNGTCAPTIXXXX*KLRPYKCME---PPLPR 675
P +AAP +G PP + + A P PAP+G AP + P PP+P+
Sbjct: 1126 PSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSG--APPVPKPSVAAPPVPAPSSGIPPVPK 1183
Query: 674 EQPVLRPV--SSESTP 633
+ PV SE+ P
Sbjct: 1184 PAAGVPPVPPPSEAPP 1199
>SPAC22F3.09c |res2|mcs1, pct1|MBF transcription factor complex
subunit Res2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 657
Score = 26.6 bits (56), Expect = 4.7
Identities = 14/27 (51%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Frame = +1
Query: 721 GGXG-IVGAQVPLGAGVGLAHKYRADG 798
GG G G VP GV LA KY+ DG
Sbjct: 71 GGYGKYQGTWVPFQRGVDLATKYKVDG 97
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 26.6 bits (56), Expect = 4.7
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +2
Query: 779 TSTAPTAESRSLCTETEPPTXVNSSKPTTWSN 874
TS PT S + T T PPT +SS P T +N
Sbjct: 397 TSIPPTGNSTTPVTPTVPPT--SSSTPLTTTN 426
>SPAC2F3.10 |||GARP complex subunit Vps54 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 949
Score = 26.6 bits (56), Expect = 4.7
Identities = 27/98 (27%), Positives = 42/98 (42%)
Frame = -1
Query: 695 MEPPLPREQPVLRPVSSESTPSTLTPMR*VHP*QRYAVITESASRIAALIPTATASCPEY 516
+E P+ +PV P +E TP TL+P+ + + E + A AS Y
Sbjct: 41 LEDPVNPIRPVYTPTRTEITPVTLSPIPITPVREFQPYLHEISQEYARYSKQKRASLRRY 100
Query: 515 R*QKPRMIFSLYRFPDAVSILRNIVSCSYSLRASSEVS 402
+ ++ S+ S+LR S S LR +SE S
Sbjct: 101 LEKHGKLEGSMKESSINGSLLRR-SSVSTILRPASESS 137
>SPAC23H4.14 |vam6|vps39|guanyl-nucleotide exchange factor
Vma6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 905
Score = 26.6 bits (56), Expect = 4.7
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -3
Query: 813 SERDSAVGAVLVGEAHSGSQRDLRTNNPVATI 718
S+ +S VL HS SQ DLR + V+T+
Sbjct: 402 SQNESIESNVLFPGNHSNSQTDLRNGDAVSTV 433
>SPAC26A3.09c |rga2||GTPase activating protein
Rga2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1275
Score = 26.2 bits (55), Expect = 6.2
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +2
Query: 773 SPTSTAPTAESRSLCTETEPPTXVNSSKPT 862
+PTS P + + TE+ PP ++SS T
Sbjct: 401 APTSNVPAYSTPARPTESPPPPPISSSSTT 430
>SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 536
Score = 25.8 bits (54), Expect = 8.2
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = -3
Query: 798 AVGAVLVGEAHSGSQRDLRTNNPVATIEVASIQMHGTSLA 679
A GA HSGS D P+ATI + + + LA
Sbjct: 437 AAGAAAEAAEHSGSGSDSYPEGPLATIPESDSESMASDLA 476
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,396,897
Number of Sequences: 5004
Number of extensions: 68324
Number of successful extensions: 230
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 208
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 229
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 444486180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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