Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP15_F_C10
(911 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41009-4|AAA82280.1| 404|Caenorhabditis elegans Hypothetical pr... 31 1.1
U41009-3|AAO44916.1| 353|Caenorhabditis elegans Hypothetical pr... 31 1.1
U41009-2|AAA82279.1| 404|Caenorhabditis elegans Hypothetical pr... 31 1.1
AL110479-11|CAB54357.1| 363|Caenorhabditis elegans Hypothetical... 31 1.1
AL110479-10|CAD56249.1| 345|Caenorhabditis elegans Hypothetical... 31 1.1
Z83127-5|CAB05628.2| 575|Caenorhabditis elegans Hypothetical pr... 30 2.6
U52002-3|AAL02476.1| 1306|Caenorhabditis elegans Cadherin family... 30 2.6
U52002-2|AAB37728.1| 1544|Caenorhabditis elegans Cadherin family... 30 2.6
>U41009-4|AAA82280.1| 404|Caenorhabditis elegans Hypothetical
protein C06E7.1a protein.
Length = 404
Score = 31.1 bits (67), Expect = 1.1
Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 4/76 (5%)
Frame = +1
Query: 178 ADAVVIRQDNDNIGV--EGYNTGYETSNGIKAQETGQLKNIGTENEALEVR--GEFAYIG 345
A V + +D+D++G +G GY T +A L + + E+R GE ++
Sbjct: 106 AAGVHVDKDSDDVGAGDQGIMFGYATDETEEAMPLTLLLSHKLNRKLHELRRSGELEWVR 165
Query: 346 PDGVTYAVTYVANEGG 393
PD T A+EGG
Sbjct: 166 PDSKTQVTIEYASEGG 181
>U41009-3|AAO44916.1| 353|Caenorhabditis elegans Hypothetical
protein C06E7.3b protein.
Length = 353
Score = 31.1 bits (67), Expect = 1.1
Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 4/76 (5%)
Frame = +1
Query: 178 ADAVVIRQDNDNIGV--EGYNTGYETSNGIKAQETGQLKNIGTENEALEVR--GEFAYIG 345
A V + +D+D++G +G GY T +A L + + E+R GE ++
Sbjct: 55 AAGVHVDKDSDDVGAGDQGIMFGYATDETEEAMPLTLLLSHKLNRKLHELRRSGELEWVR 114
Query: 346 PDGVTYAVTYVANEGG 393
PD T A+EGG
Sbjct: 115 PDSKTQVTIEYASEGG 130
>U41009-2|AAA82279.1| 404|Caenorhabditis elegans Hypothetical
protein C06E7.3a protein.
Length = 404
Score = 31.1 bits (67), Expect = 1.1
Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 4/76 (5%)
Frame = +1
Query: 178 ADAVVIRQDNDNIGV--EGYNTGYETSNGIKAQETGQLKNIGTENEALEVR--GEFAYIG 345
A V + +D+D++G +G GY T +A L + + E+R GE ++
Sbjct: 106 AAGVHVDKDSDDVGAGDQGIMFGYATDETEEAMPLTLLLSHKLNRKLHELRRSGELEWVR 165
Query: 346 PDGVTYAVTYVANEGG 393
PD T A+EGG
Sbjct: 166 PDSKTQVTIEYASEGG 181
>AL110479-11|CAB54357.1| 363|Caenorhabditis elegans Hypothetical
protein Y105C5B.12b protein.
Length = 363
Score = 31.1 bits (67), Expect = 1.1
Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 4/76 (5%)
Frame = +1
Query: 178 ADAVVIRQDNDNIGV--EGYNTGYETSNGIKAQETGQLKNIGTENEALEVR--GEFAYIG 345
A V + +D+D++G +G GY T +A L + + E+R GE ++
Sbjct: 65 AAGVHVDKDSDDVGAGDQGIMFGYATDETEEAMPLTLLLSHKLNRKLHELRRSGELEWVR 124
Query: 346 PDGVTYAVTYVANEGG 393
PD T A+EGG
Sbjct: 125 PDSKTQVTIEYASEGG 140
>AL110479-10|CAD56249.1| 345|Caenorhabditis elegans Hypothetical
protein Y105C5B.12a protein.
Length = 345
Score = 31.1 bits (67), Expect = 1.1
Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 4/76 (5%)
Frame = +1
Query: 178 ADAVVIRQDNDNIGV--EGYNTGYETSNGIKAQETGQLKNIGTENEALEVR--GEFAYIG 345
A V + +D+D++G +G GY T +A L + + E+R GE ++
Sbjct: 47 AAGVHVDKDSDDVGAGDQGIMFGYATDETEEAMPLTLLLSHKLNRKLHELRRSGELEWVR 106
Query: 346 PDGVTYAVTYVANEGG 393
PD T A+EGG
Sbjct: 107 PDSKTQVTIEYASEGG 122
>Z83127-5|CAB05628.2| 575|Caenorhabditis elegans Hypothetical
protein T23F6.5 protein.
Length = 575
Score = 29.9 bits (64), Expect = 2.6
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -2
Query: 472 MSIFGLDAGACSVDLSPWECEVPKAGIHP 386
+S FG+ + C+ LSP C P+ +HP
Sbjct: 47 LSFFGIRSFVCTCHLSPIACANPQFAVHP 75
>U52002-3|AAL02476.1| 1306|Caenorhabditis elegans Cadherin family
protein 5, isoformb protein.
Length = 1306
Score = 29.9 bits (64), Expect = 2.6
Identities = 22/75 (29%), Positives = 34/75 (45%)
Frame = +1
Query: 259 IKAQETGQLKNIGTENEALEVRGEFAYIGPDGVTYAVTYVANEGGFQPSAPHIPKGLSQP 438
I+ ++G L T + V +++ PD V+ NEG Q S + +S+
Sbjct: 742 IEGADSGMLPLSSTTTVLINVVATSSHLIPDASP--VSNTPNEGELQFSLRNYTASVSEA 799
Query: 439 NRPQHLVQKYSFI*K 483
RP HLVQ S + K
Sbjct: 800 VRPPHLVQVLSVMNK 814
>U52002-2|AAB37728.1| 1544|Caenorhabditis elegans Cadherin family
protein 5, isoforma protein.
Length = 1544
Score = 29.9 bits (64), Expect = 2.6
Identities = 22/75 (29%), Positives = 34/75 (45%)
Frame = +1
Query: 259 IKAQETGQLKNIGTENEALEVRGEFAYIGPDGVTYAVTYVANEGGFQPSAPHIPKGLSQP 438
I+ ++G L T + V +++ PD V+ NEG Q S + +S+
Sbjct: 886 IEGADSGMLPLSSTTTVLINVVATSSHLIPDASP--VSNTPNEGELQFSLRNYTASVSEA 943
Query: 439 NRPQHLVQKYSFI*K 483
RP HLVQ S + K
Sbjct: 944 VRPPHLVQVLSVMNK 958
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,353,650
Number of Sequences: 27780
Number of extensions: 279186
Number of successful extensions: 568
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 543
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 568
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2328783996
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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