Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP15_F_C09
         (900 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT003578-1|AAO39582.1|  739|Drosophila melanogaster LD24631p pro...    33   0.53 
AY119224-1|AAM51084.1|  469|Drosophila melanogaster SD16903p pro...    33   0.53 
AE013599-2734|AAF57660.2| 1271|Drosophila melanogaster CG30122-P...    33   0.53 
BT010037-1|AAQ22506.1|  409|Drosophila melanogaster LD43171p pro...    31   2.2  
AE014298-2534|AAN09435.1|  409|Drosophila melanogaster CG32564-P...    31   2.2  
S48157-1|AAB24152.1| 1490|Drosophila melanogaster DNA polymerase...    29   6.6  
BT012441-1|AAS93712.1| 1423|Drosophila melanogaster RH07858p pro...    29   8.7  
AE013599-3832|AAF47176.3| 1423|Drosophila melanogaster CG3328-PA...    29   8.7  

>BT003578-1|AAO39582.1|  739|Drosophila melanogaster LD24631p
           protein.
          Length = 739

 Score = 33.1 bits (72), Expect = 0.53
 Identities = 19/60 (31%), Positives = 27/60 (45%)
 Frame = +3

Query: 279 GESDQGLFGKGGYNREFFNDDRGKLTGQAYGTRVLGPGGDSTSYGGRLDWANENAKAAID 458
           G  D+G  G G  +R + N +RG   G   G    G GG     GG+ +W   N ++  D
Sbjct: 449 GYDDRGYGGGGSGSRGYDNRNRGYAGGSGGGG---GGGGGGGGGGGQQNWMQNNRRSGYD 505


>AY119224-1|AAM51084.1|  469|Drosophila melanogaster SD16903p
           protein.
          Length = 469

 Score = 33.1 bits (72), Expect = 0.53
 Identities = 19/60 (31%), Positives = 27/60 (45%)
 Frame = +3

Query: 279 GESDQGLFGKGGYNREFFNDDRGKLTGQAYGTRVLGPGGDSTSYGGRLDWANENAKAAID 458
           G  D+G  G G  +R + N +RG   G   G    G GG     GG+ +W   N ++  D
Sbjct: 179 GYDDRGYGGGGSGSRGYDNRNRGYAGGSGGGG---GGGGGGGGGGGQQNWMQNNRRSGYD 235


>AE013599-2734|AAF57660.2| 1271|Drosophila melanogaster CG30122-PB
            protein.
          Length = 1271

 Score = 33.1 bits (72), Expect = 0.53
 Identities = 19/60 (31%), Positives = 27/60 (45%)
 Frame = +3

Query: 279  GESDQGLFGKGGYNREFFNDDRGKLTGQAYGTRVLGPGGDSTSYGGRLDWANENAKAAID 458
            G  D+G  G G  +R + N +RG   G   G    G GG     GG+ +W   N ++  D
Sbjct: 982  GYDDRGYGGGGSGSRGYDNRNRGYAGGSGGGG---GGGGGGGGGGGQQNWMQNNRRSGYD 1038


>BT010037-1|AAQ22506.1|  409|Drosophila melanogaster LD43171p
           protein.
          Length = 409

 Score = 31.1 bits (67), Expect = 2.2
 Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
 Frame = +3

Query: 252 GGGKVFGTLGESD-QGLFG-KGGYNREFFNDDRGKLTGQAYGTRVLGPGGDSTSYGG 416
           GGG   G+ G     G  G  GGYN+ ++N     +    YG+        S+SYGG
Sbjct: 45  GGGYSTGSGGYGGGYGSGGYSGGYNQGYYNQPSRPVYNSEYGSSSSSSASSSSSYGG 101


>AE014298-2534|AAN09435.1|  409|Drosophila melanogaster CG32564-PA
           protein.
          Length = 409

 Score = 31.1 bits (67), Expect = 2.2
 Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
 Frame = +3

Query: 252 GGGKVFGTLGESD-QGLFG-KGGYNREFFNDDRGKLTGQAYGTRVLGPGGDSTSYGG 416
           GGG   G+ G     G  G  GGYN+ ++N     +    YG+        S+SYGG
Sbjct: 45  GGGYSTGSGGYGGGYGSGGYSGGYNQGYYNQPSRPVYNSEYGSSSSSSASSSSSYGG 101


>S48157-1|AAB24152.1| 1490|Drosophila melanogaster DNA
            polymerase-primase 180 kdasubunit protein.
          Length = 1490

 Score = 29.5 bits (63), Expect = 6.6
 Identities = 10/34 (29%), Positives = 24/34 (70%)
 Frame = +3

Query: 678  CLVSLEV*IKFCLKKFYKNRLICNYLSASYSLIT 779
            C +SL++ ++  +++FYKN L+C++   +++  T
Sbjct: 1342 CAISLQLSMRQYVQRFYKNWLVCDHPDCNFNTRT 1375


>BT012441-1|AAS93712.1| 1423|Drosophila melanogaster RH07858p
           protein.
          Length = 1423

 Score = 29.1 bits (62), Expect = 8.7
 Identities = 17/34 (50%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
 Frame = +3

Query: 519 LGKNTHLSAGGVVSK--EFGHRRPDVGLQAQITH 614
           LG N HLSAGG V    E  H  P  GL A +T+
Sbjct: 38  LGHNGHLSAGGGVHSHMESPHTSPMNGLDAHLTN 71


>AE013599-3832|AAF47176.3| 1423|Drosophila melanogaster CG3328-PA
           protein.
          Length = 1423

 Score = 29.1 bits (62), Expect = 8.7
 Identities = 17/34 (50%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
 Frame = +3

Query: 519 LGKNTHLSAGGVVSK--EFGHRRPDVGLQAQITH 614
           LG N HLSAGG V    E  H  P  GL A +T+
Sbjct: 38  LGHNGHLSAGGGVHSHMESPHTSPMNGLDAHLTN 71


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,495,887
Number of Sequences: 53049
Number of extensions: 735650
Number of successful extensions: 2033
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1929
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2031
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4382549442
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)