Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP15_F_C06
(993 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 39 0.005
Z78413-7|CAB01657.1| 352|Caenorhabditis elegans Hypothetical pr... 34 0.14
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 33 0.32
U42436-10|AAF99899.1| 272|Caenorhabditis elegans Ribosomal prot... 33 0.42
U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical pr... 33 0.42
U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astaci... 32 0.55
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 32 0.73
Z74031-17|CAN86923.1| 380|Caenorhabditis elegans Hypothetical p... 31 0.96
Z74031-16|CAA98452.1| 378|Caenorhabditis elegans Hypothetical p... 31 0.96
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 31 0.96
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 31 1.7
AC024136-6|AAF35965.3| 425|Caenorhabditis elegans Hypothetical ... 31 1.7
Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical pr... 30 2.2
V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein ( Caeno... 30 2.2
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 30 2.2
J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein ( C.ele... 30 2.2
AF068708-5|AAK68200.1| 628|Caenorhabditis elegans P granule abn... 30 2.9
AF068708-4|AAC17755.1| 693|Caenorhabditis elegans P granule abn... 30 2.9
AB120729-1|BAC87886.1| 693|Caenorhabditis elegans PGL-3 protein. 30 2.9
Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical pr... 29 3.9
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 29 3.9
Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical pr... 29 5.1
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 29 5.1
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 29 5.1
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 29 5.1
AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical ... 29 5.1
AF003140-8|AAB54169.1| 396|Caenorhabditis elegans Hypothetical ... 29 5.1
Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical pr... 29 6.8
Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical pr... 29 6.8
U93842-1|AAB52421.1| 1409|Caenorhabditis elegans regulator of pr... 29 6.8
U50310-5|AAA92541.1| 318|Caenorhabditis elegans Ground-like (gr... 29 6.8
U49945-3|AAM51509.1| 1408|Caenorhabditis elegans Aboc, expulsion... 29 6.8
U49945-2|AAC47926.1| 1409|Caenorhabditis elegans Aboc, expulsion... 29 6.8
Z92831-7|CAB07369.2| 2396|Caenorhabditis elegans Hypothetical pr... 28 9.0
Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical pr... 28 9.0
Z81066-8|CAB02974.2| 2396|Caenorhabditis elegans Hypothetical pr... 28 9.0
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 28 9.0
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 28 9.0
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 28 9.0
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 39.1 bits (87), Expect = 0.005
Identities = 34/120 (28%), Positives = 34/120 (28%), Gaps = 1/120 (0%)
Frame = -3
Query: 757 APPRXXPRPPVXGXXXXGXAXFXXXXXGXGXGGXXRGGGEGGXGXXXVVXXGXXXXXXXX 578
APP P PP G G G GG GGG GG G G
Sbjct: 53 APP---PPPPACGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGCGGGC 109
Query: 577 XXXXXXXXRXXGXGXXGN-CXXXXWXRGRXGXWGXGXXGCXXGKXXVGGXXPPXXXXGGG 401
G G G C G G G G GC G GG GGG
Sbjct: 110 APPPPPPACGGGCGGGGGGCGGGCGGGGGGGCGGGGGGGCGGGGGGCGGGGGGCGGGGGG 169
Score = 33.9 bits (74), Expect = 0.18
Identities = 30/102 (29%), Positives = 30/102 (29%), Gaps = 4/102 (3%)
Frame = -3
Query: 694 FXXXXXGXGXGGXXRG-GGEGGXGXXXVVXXGXXXXXXXXXXXXXXXXRXXGXGXXGN-C 521
F G G GG G GG GG G G G G G C
Sbjct: 20 FPSGGGGGGGGGCGGGCGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGGGGC 79
Query: 520 XXXXWXRGRXGXWGXGXXGCXXGKXXVGG--XXPPXXXXGGG 401
G G G G GC G GG PP GGG
Sbjct: 80 GGGGGCGGGGGGCGGGGGGCGGGGGCGGGCAPPPPPPACGGG 121
Score = 29.5 bits (63), Expect = 3.9
Identities = 26/94 (27%), Positives = 26/94 (27%), Gaps = 2/94 (2%)
Frame = -3
Query: 676 GXGXGGXXRGGGEGGXGXXXVVXXGXXXXXXXXXXXXXXXXRXXGXGXXGNCXXXXWXR- 500
G G GG GGG GG G G G G C
Sbjct: 91 GCGGGGGGCGGG-GGCGGGCAPPPPPPACGGGCGGGGGGCGGGCGGGGGGGCGGGGGGGC 149
Query: 499 -GRXGXWGXGXXGCXXGKXXVGGXXPPXXXXGGG 401
G G G G GC G GG GGG
Sbjct: 150 GGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGGG 183
>Z78413-7|CAB01657.1| 352|Caenorhabditis elegans Hypothetical
protein T01C3.7 protein.
Length = 352
Score = 34.3 bits (75), Expect = 0.14
Identities = 28/81 (34%), Positives = 30/81 (37%), Gaps = 1/81 (1%)
Frame = +3
Query: 729 GGRGXXRGGA-XXXGGXRXGXVXXGARVGAXGRXXXGGRAXGXRRRGXXPGXAAARRXGX 905
GGRG RGG+ GG G G R G+ G GG G R G G R G
Sbjct: 17 GGRGGDRGGSRGGFGGGGRGGYGGGDR-GSFGGGDRGG-FRGGRGGGDRGGFRGGRGGGD 74
Query: 906 RXXAXGRXRAEGXAAXRXGXR 968
R GR G R R
Sbjct: 75 RGGFGGRGSPRGGFGGRGSPR 95
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 33.1 bits (72), Expect = 0.32
Identities = 25/91 (27%), Positives = 28/91 (30%), Gaps = 2/91 (2%)
Frame = -2
Query: 992 PGPHXXXXPXPXXXGGXALRAXAXGXXXAXPXTPRGGXPGXXPAXPXXXXAXPXRXATGR 813
P P P P GG + A P P+ G PG P A G
Sbjct: 351 PPPQQFHAPSPQSFGGPPPPVSSAPGNFAPP--PQSGPPGAFAPPPSAFGAPQGPGGPGG 408
Query: 812 --PDPXAXXXAPXSXXPXRPRAXAXXPPXPG 726
P P AP S P + PP PG
Sbjct: 409 YGPPPPGGPGAPGSYGPPQGGPGGFGPPPPG 439
>U42436-10|AAF99899.1| 272|Caenorhabditis elegans Ribosomal
protein, small subunitprotein 2 protein.
Length = 272
Score = 32.7 bits (71), Expect = 0.42
Identities = 17/38 (44%), Positives = 17/38 (44%)
Frame = +3
Query: 729 GGRGXXRGGAXXXGGXRXGXVXXGARVGAXGRXXXGGR 842
GGRG RGGA G G G R G GR GR
Sbjct: 12 GGRGGGRGGARPAGDRPAGRGGRGGRGGRGGRGGRAGR 49
>U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical
protein C27H5.3 protein.
Length = 448
Score = 32.7 bits (71), Expect = 0.42
Identities = 25/82 (30%), Positives = 26/82 (31%), Gaps = 2/82 (2%)
Frame = +3
Query: 729 GGRGXXRGGAXXXGGXRXGXVXXGARVGA--XGRXXXGGRAXGXRRRGXXPGXAAARRXG 902
GG RGG GG R G + G G GGR RG G R G
Sbjct: 292 GGERGGRGGRGGFGGGRGGPMGGRGGFGGDRGGYGGGGGRGGFDGGRGGGGGFRGGDRGG 351
Query: 903 XRXXAXGRXRAEGXAAXRXGXR 968
R G R R G R
Sbjct: 352 FRGGDRGGFRGGDRGGFRGGDR 373
>U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astacin
protease protein33 protein.
Length = 644
Score = 32.3 bits (70), Expect = 0.55
Identities = 16/40 (40%), Positives = 16/40 (40%)
Frame = -3
Query: 850 PXARPPXXXRPXAPTRAPXXTXPHRXPPXXXAPPRXXPRP 731
P PP RP P R P HR PP PP P P
Sbjct: 52 PFGPPPPWDRPPPPWRRPPW---HRRPPWGLPPPPPPPEP 88
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 31.9 bits (69), Expect = 0.73
Identities = 19/46 (41%), Positives = 19/46 (41%)
Frame = +3
Query: 729 GGRGXXRGGAXXXGGXRXGXVXXGARVGAXGRXXXGGRAXGXRRRG 866
GGRG GG GG G G G G GGR G R RG
Sbjct: 92 GGRGGGGGGGGGRGGGGGGRGGGGGGGGGRG-GGGGGRGGGGRGRG 136
Score = 30.3 bits (65), Expect = 2.2
Identities = 24/83 (28%), Positives = 24/83 (28%), Gaps = 1/83 (1%)
Frame = +3
Query: 729 GGRGXXRGGAXXX-GGXRXGXVXXGARVGAXGRXXXGGRAXGXRRRGXXPGXAAARRXGX 905
GG G RGG GG R G G G GG G R G G G
Sbjct: 51 GGPGWGRGGGGSGWGGGRGGGWGNNGGGGNWGGNGGGGNGGGGRGGGGGGGGGRGGGGGG 110
Query: 906 RXXAXGRXRAEGXAAXRXGXRXR 974
R G G G R
Sbjct: 111 RGGGGGGGGGRGGGGGGRGGGGR 133
>Z74031-17|CAN86923.1| 380|Caenorhabditis elegans Hypothetical
protein F32D8.7b protein.
Length = 380
Score = 31.5 bits (68), Expect = 0.96
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = +3
Query: 603 PXXTTXXXPXPPSPPPRXXPPXPXP 677
P TT P P +PPP PP P P
Sbjct: 234 PRPTTRRLPPPTTPPPPPPPPAPSP 258
>Z74031-16|CAA98452.1| 378|Caenorhabditis elegans Hypothetical
protein F32D8.7a protein.
Length = 378
Score = 31.5 bits (68), Expect = 0.96
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = +3
Query: 603 PXXTTXXXPXPPSPPPRXXPPXPXP 677
P TT P P +PPP PP P P
Sbjct: 232 PRPTTRRLPPPTTPPPPPPPPAPSP 256
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 31.5 bits (68), Expect = 0.96
Identities = 20/49 (40%), Positives = 21/49 (42%), Gaps = 3/49 (6%)
Frame = -3
Query: 865 PRRRXPXARPPXXXRPXAPTRAPXXTXPH---RXPPXXXAPPRXXPRPP 728
P R P RPP P +P R P T P R PP PP P PP
Sbjct: 151 PPRSPPPRRPPMT--PPSPQRRPPRTPPSPEPRNPPR--TPPSPIPPPP 195
Score = 30.3 bits (65), Expect = 2.2
Identities = 17/47 (36%), Positives = 20/47 (42%), Gaps = 1/47 (2%)
Frame = -3
Query: 865 PRR-RXPXARPPXXXRPXAPTRAPXXTXPHRXPPXXXAPPRXXPRPP 728
PR+ R + PP P P P + P R PP PP RPP
Sbjct: 128 PRKSRAGGSSPPPPPPPRVPRTPPPRSPPPRRPP--MTPPSPQRRPP 172
Score = 29.5 bits (63), Expect = 3.9
Identities = 17/61 (27%), Positives = 19/61 (31%)
Frame = +2
Query: 365 GXXSXPXXTXXRXPPXTXRRGXPXTHSXFSPXTPXXXXPPXXXXPPXPXXXXTIPXGPXP 544
G S P R P R P +P +P PP P P P P P
Sbjct: 134 GGSSPPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRR-PPRTPPSPEPRNPPRTPPSPIP 192
Query: 545 P 547
P
Sbjct: 193 P 193
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 30.7 bits (66), Expect = 1.7
Identities = 14/41 (34%), Positives = 14/41 (34%)
Frame = -3
Query: 850 PXARPPXXXRPXAPTRAPXXTXPHRXPPXXXAPPRXXPRPP 728
P PP P P P P PP PP P PP
Sbjct: 31 PPPPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPP 71
Score = 29.1 bits (62), Expect = 5.1
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +3
Query: 627 PXPPSPPPRXXPPXPXP 677
P PP PPP PP P P
Sbjct: 64 PPPPPPPPPMCPPPPPP 80
>AC024136-6|AAF35965.3| 425|Caenorhabditis elegans Hypothetical
protein F54A3.1 protein.
Length = 425
Score = 30.7 bits (66), Expect = 1.7
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = -3
Query: 838 PPXXXRPXAPTRAPXXTXPHRXPPXXXAPPRXXPRP 731
PP AP R P R PP AP R P P
Sbjct: 224 PPKTTAAGAPKRPSSAVAPRRAPPASAAPTRRAPSP 259
>Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical
protein F23H12.4 protein.
Length = 301
Score = 30.3 bits (65), Expect = 2.2
Identities = 14/47 (29%), Positives = 16/47 (34%)
Frame = +2
Query: 425 GXPXTHSXFSPXTPXXXXPPXXXXPPXPXXXXTIPXGPXPPSSXXPR 565
G P T + P TP P PP P P PP P+
Sbjct: 204 GEPGTPAISEPLTPGAPGEPGDSGPPGPPGPPGAPGNDGPPGPPGPK 250
>V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-1 coding for a collagen.
).
Length = 296
Score = 30.3 bits (65), Expect = 2.2
Identities = 14/47 (29%), Positives = 16/47 (34%)
Frame = +2
Query: 425 GXPXTHSXFSPXTPXXXXPPXXXXPPXPXXXXTIPXGPXPPSSXXPR 565
G P T + P TP P PP P P PP P+
Sbjct: 199 GEPGTPAISEPLTPGAPGEPGDSGPPGPPGPPGAPGNDGPPGPPGPK 245
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 30.3 bits (65), Expect = 2.2
Identities = 18/59 (30%), Positives = 20/59 (33%)
Frame = -2
Query: 902 PXTPRGGXPGXXPAXPXXXXAXPXRXATGRPDPXAXXXAPXSXXPXRPRAXAXXPPXPG 726
P P G P P P P + G P P AP S P P + PP G
Sbjct: 229 PFNPSGAPPSGGPPGPFDPSGAPP--SGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGG 285
Score = 30.3 bits (65), Expect = 2.2
Identities = 18/59 (30%), Positives = 20/59 (33%)
Frame = -2
Query: 902 PXTPRGGXPGXXPAXPXXXXAXPXRXATGRPDPXAXXXAPXSXXPXRPRAXAXXPPXPG 726
P P G P P P P + G P P AP S P P + PP G
Sbjct: 319 PFNPSGAPPSGGPPGPFDPSGAPP--SGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGG 375
Score = 30.3 bits (65), Expect = 2.2
Identities = 18/59 (30%), Positives = 20/59 (33%)
Frame = -2
Query: 902 PXTPRGGXPGXXPAXPXXXXAXPXRXATGRPDPXAXXXAPXSXXPXRPRAXAXXPPXPG 726
P P G P P P P + G P P AP S P P + PP G
Sbjct: 349 PFNPSGAPPSGGPPGPFDPSGAPP--SGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGG 405
Score = 30.3 bits (65), Expect = 2.2
Identities = 18/59 (30%), Positives = 20/59 (33%)
Frame = -2
Query: 902 PXTPRGGXPGXXPAXPXXXXAXPXRXATGRPDPXAXXXAPXSXXPXRPRAXAXXPPXPG 726
P P G P P P P + G P P AP S P P + PP G
Sbjct: 409 PFNPSGAPPSGGPPGPFNPSGAPP--SGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGG 465
Score = 30.3 bits (65), Expect = 2.2
Identities = 18/59 (30%), Positives = 20/59 (33%)
Frame = -2
Query: 902 PXTPRGGXPGXXPAXPXXXXAXPXRXATGRPDPXAXXXAPXSXXPXRPRAXAXXPPXPG 726
P P G P P P P + G P P AP S P P + PP G
Sbjct: 424 PFNPSGAPPSGGPPGPFNPSGAPP--SGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGG 480
Score = 30.3 bits (65), Expect = 2.2
Identities = 18/59 (30%), Positives = 20/59 (33%)
Frame = -2
Query: 902 PXTPRGGXPGXXPAXPXXXXAXPXRXATGRPDPXAXXXAPXSXXPXRPRAXAXXPPXPG 726
P P G P P P P + G P P AP S P P + PP G
Sbjct: 439 PFNPSGAPPSGGPPGPFNPSGAPP--SGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGG 495
Score = 30.3 bits (65), Expect = 2.2
Identities = 18/59 (30%), Positives = 20/59 (33%)
Frame = -2
Query: 902 PXTPRGGXPGXXPAXPXXXXAXPXRXATGRPDPXAXXXAPXSXXPXRPRAXAXXPPXPG 726
P P G P P P P + G P P AP S P P + PP G
Sbjct: 454 PFNPSGAPPSGGPPGPFNPSGAPP--SGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGG 510
Score = 29.9 bits (64), Expect = 2.9
Identities = 18/59 (30%), Positives = 20/59 (33%)
Frame = -2
Query: 902 PXTPRGGXPGXXPAXPXXXXAXPXRXATGRPDPXAXXXAPXSXXPXRPRAXAXXPPXPG 726
P P G P P P P + G P P AP S P P + PP G
Sbjct: 214 PFDPSGAPPSGGPPGPFNPSGAPP--SGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGG 270
Score = 29.9 bits (64), Expect = 2.9
Identities = 18/59 (30%), Positives = 20/59 (33%)
Frame = -2
Query: 902 PXTPRGGXPGXXPAXPXXXXAXPXRXATGRPDPXAXXXAPXSXXPXRPRAXAXXPPXPG 726
P P G P P P P + G P P AP S P P + PP G
Sbjct: 244 PFDPSGAPPSGGPPGPFNPSGAPP--SGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGG 300
Score = 29.9 bits (64), Expect = 2.9
Identities = 18/59 (30%), Positives = 20/59 (33%)
Frame = -2
Query: 902 PXTPRGGXPGXXPAXPXXXXAXPXRXATGRPDPXAXXXAPXSXXPXRPRAXAXXPPXPG 726
P P G P P P P + G P P AP S P P + PP G
Sbjct: 304 PFDPSGAQPSGGPPGPFNPSGAPP--SGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGG 360
Score = 29.9 bits (64), Expect = 2.9
Identities = 18/59 (30%), Positives = 20/59 (33%)
Frame = -2
Query: 902 PXTPRGGXPGXXPAXPXXXXAXPXRXATGRPDPXAXXXAPXSXXPXRPRAXAXXPPXPG 726
P P G P P P P + G P P AP S P P + PP G
Sbjct: 334 PFDPSGAPPSGGPPGPFNPSGAPP--SGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGG 390
Score = 29.9 bits (64), Expect = 2.9
Identities = 18/59 (30%), Positives = 20/59 (33%)
Frame = -2
Query: 902 PXTPRGGXPGXXPAXPXXXXAXPXRXATGRPDPXAXXXAPXSXXPXRPRAXAXXPPXPG 726
P P G P P P P + G P P AP S P P + PP G
Sbjct: 364 PFDPSGAPPSGGPPGPFDPSGAPP--SGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGG 420
Score = 29.9 bits (64), Expect = 2.9
Identities = 18/59 (30%), Positives = 20/59 (33%)
Frame = -2
Query: 902 PXTPRGGXPGXXPAXPXXXXAXPXRXATGRPDPXAXXXAPXSXXPXRPRAXAXXPPXPG 726
P P G P P P P + G P P AP S P P + PP G
Sbjct: 379 PFDPSGAPPSGGPPGPFDPSGAPP--SGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGG 435
Score = 29.9 bits (64), Expect = 2.9
Identities = 18/59 (30%), Positives = 20/59 (33%)
Frame = -2
Query: 902 PXTPRGGXPGXXPAXPXXXXAXPXRXATGRPDPXAXXXAPXSXXPXRPRAXAXXPPXPG 726
P P G P P P P + G P P AP S P P + PP G
Sbjct: 394 PFDPSGAPPSGGPPGPFNPSGAPP--SGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGG 450
Score = 29.1 bits (62), Expect = 5.1
Identities = 17/56 (30%), Positives = 19/56 (33%)
Frame = -2
Query: 902 PXTPRGGXPGXXPAXPXXXXAXPXRXATGRPDPXAXXXAPXSXXPXRPRAXAXXPP 735
P P G P P P P + G P P AP S P P + PP
Sbjct: 469 PFNPSGAPPSGGPPGPFDPSGAPP--SGGPPGPFNPSGAPPSGGPPGPFDPSGAPP 522
>J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 1 (col-1) gene, complete
cds. ).
Length = 296
Score = 30.3 bits (65), Expect = 2.2
Identities = 14/47 (29%), Positives = 16/47 (34%)
Frame = +2
Query: 425 GXPXTHSXFSPXTPXXXXPPXXXXPPXPXXXXTIPXGPXPPSSXXPR 565
G P T + P TP P PP P P PP P+
Sbjct: 199 GEPGTPAISEPLTPGAPGEPGDSGPPGPPGPPGAPGNDGPPGPPGPK 245
>AF068708-5|AAK68200.1| 628|Caenorhabditis elegans P granule
abnormality protein 3,isoform b protein.
Length = 628
Score = 29.9 bits (64), Expect = 2.9
Identities = 21/53 (39%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Frame = +3
Query: 729 GGRGXXRGGAXXXGGXR-XGXVXXGARVGAXGRXXXGGRAXGXRRRGXXPGXA 884
GGRG RGG GG R G G+R G G G + G RG G A
Sbjct: 567 GGRGGDRGGRGAYGGDRGRGGSGDGSR-GYRGGDRGGRGSYGEGSRGYQGGRA 618
>AF068708-4|AAC17755.1| 693|Caenorhabditis elegans P granule
abnormality protein 3,isoform a protein.
Length = 693
Score = 29.9 bits (64), Expect = 2.9
Identities = 21/53 (39%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Frame = +3
Query: 729 GGRGXXRGGAXXXGGXR-XGXVXXGARVGAXGRXXXGGRAXGXRRRGXXPGXA 884
GGRG RGG GG R G G+R G G G + G RG G A
Sbjct: 632 GGRGGDRGGRGAYGGDRGRGGSGDGSR-GYRGGDRGGRGSYGEGSRGYQGGRA 683
>AB120729-1|BAC87886.1| 693|Caenorhabditis elegans PGL-3 protein.
Length = 693
Score = 29.9 bits (64), Expect = 2.9
Identities = 21/53 (39%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Frame = +3
Query: 729 GGRGXXRGGAXXXGGXR-XGXVXXGARVGAXGRXXXGGRAXGXRRRGXXPGXA 884
GGRG RGG GG R G G+R G G G + G RG G A
Sbjct: 632 GGRGGDRGGRGAYGGDRGRGGSGDGSR-GYRGGDRGGRGSYGEGSRGYQGGRA 683
>Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical
protein Y48E1B.1 protein.
Length = 497
Score = 29.5 bits (63), Expect = 3.9
Identities = 20/82 (24%), Positives = 23/82 (28%)
Frame = +3
Query: 528 PXXPXPXXLXXXXXXXXXXXXXSXXPXXTTXXXPXPPSPPPRXXPPXPXPX*XXXXSAXP 707
P P P L + P + P PP PPP PP P + P
Sbjct: 324 PPPPPPMKLDPSPQPAATPVEITEIPPIISPPAPPPPPPPPPPPPPPQTPSASSSVTFSP 383
Query: 708 XXLSPXTGGRGXXRGGAXXXGG 773
GGR GG
Sbjct: 384 --TKSVDGGRSDLMAAIRAAGG 403
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 29.5 bits (63), Expect = 3.9
Identities = 21/91 (23%), Positives = 22/91 (24%), Gaps = 1/91 (1%)
Frame = +3
Query: 402 PPPXXLXGGXXPPTXXFPXXHPXXPFPXXPXRPLXQXXXXQFPXXPXPXXLXXXXXXXXX 581
P P PP +P P P P P P P
Sbjct: 56 PYPQQAVPAPAPPPAPYPQHAVPAPAPPLASYPQNAVPVPAPPPAPYPQHAVPAPAPPPA 115
Query: 582 XXXXSXXPXXTTXXX-PXPPSPPPRXXPPXP 671
P P PP PPP PP P
Sbjct: 116 PYPQHAVPAPAPYQQQPPPPPPPPHYPPPPP 146
>Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical
protein C56A3.1 protein.
Length = 393
Score = 29.1 bits (62), Expect = 5.1
Identities = 26/90 (28%), Positives = 30/90 (33%)
Frame = +3
Query: 633 PPSPPPRXXPPXPXPX*XXXXSAXPXXLSPXTGGRGXXRGGAXXXGGXRXGXVXXGARVG 812
P PPP+ P P P P + +GG G GG GG G G G
Sbjct: 59 PVCPPPQ---PCPAPPAAYCPQVQPVYVQ--SGGGGCGGGGCGGGGGGCGGGGGCGGG-G 112
Query: 813 AXGRXXXGGRAXGXRRRGXXPGXAAARRXG 902
G GG G G G A+ G
Sbjct: 113 GGGCGGGGGGGCGGGGGGGGGGYASGGSGG 142
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 29.1 bits (62), Expect = 5.1
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +3
Query: 627 PXPPSPPPRXXPPXPXP 677
P PP PPP PP P P
Sbjct: 758 PPPPPPPPGGCPPPPPP 774
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 29.1 bits (62), Expect = 5.1
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +3
Query: 627 PXPPSPPPRXXPPXPXP 677
P PP PPP PP P P
Sbjct: 758 PPPPPPPPGGCPPPPPP 774
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 29.1 bits (62), Expect = 5.1
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +3
Query: 627 PXPPSPPPRXXPPXPXP 677
P PP PPP PP P P
Sbjct: 341 PPPPPPPPGGCPPPPPP 357
>AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical
protein ZC123.1 protein.
Length = 730
Score = 29.1 bits (62), Expect = 5.1
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = +3
Query: 603 PXXTTXXXPXPPSPPPRXXPPXPXP 677
P T P P +PPP PP P P
Sbjct: 128 PPRTCCPPPTPAAPPPPPPPPPPAP 152
>AF003140-8|AAB54169.1| 396|Caenorhabditis elegans Hypothetical
protein C44E4.4 protein.
Length = 396
Score = 29.1 bits (62), Expect = 5.1
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = +3
Query: 768 GGXRXGXVXXGARVGAXGRXXXGGRAXGXRRRG 866
GG R G G R G GR GGR RRG
Sbjct: 329 GGGRGGRGGRGGRGGRGGRGGRGGRGGRGDRRG 361
>Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical
protein C53B4.5 protein.
Length = 289
Score = 28.7 bits (61), Expect = 6.8
Identities = 30/121 (24%), Positives = 32/121 (26%), Gaps = 2/121 (1%)
Frame = -2
Query: 992 PGPHXXXXPX--PXXXGGXALRAXAXGXXXAXPXTPRGGXPGXXPAXPXXXXAXPXRXAT 819
PGP P P G A A P P GG PG PA P
Sbjct: 149 PGPQGNKGPLGPPGPPGPEGPNGTAGNKGPAGPPGP-GGKPG--PAGPPGENGRNGEPQP 205
Query: 818 GRPDPXAXXXAPXSXXPXRPRAXAXXPPXPGXRRXXXRXGRXXXXLXXGRXGGXXSGGGX 639
G P P S P PG + G+ GR G G
Sbjct: 206 GSPGEPGRPGQPGSRGPAGQPGKDGAQGGPGEKGANGEPGQPGRDGQPGRPGQPGRDGHP 265
Query: 638 G 636
G
Sbjct: 266 G 266
>Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical
protein T28C6.1 protein.
Length = 281
Score = 28.7 bits (61), Expect = 6.8
Identities = 21/58 (36%), Positives = 24/58 (41%)
Frame = +3
Query: 729 GGRGXXRGGAXXXGGXRXGXVXXGARVGAXGRXXXGGRAXGXRRRGXXPGXAAARRXG 902
GGRG RGG+ GG R G G G G GG G G G ++A G
Sbjct: 54 GGRGGGRGGS---GGGRGGGSGGGR--GGSGGAGAGGSGSGSGGWGGQDGGSSAGGWG 106
>U93842-1|AAB52421.1| 1409|Caenorhabditis elegans regulator of
presynaptic activity protein.
Length = 1409
Score = 28.7 bits (61), Expect = 6.8
Identities = 18/47 (38%), Positives = 19/47 (40%), Gaps = 3/47 (6%)
Frame = -3
Query: 856 RXPXARPPXXXR--PXAPTRAPXXTX-PHRXPPXXXAPPRXXPRPPV 725
R P PP R P P R P P + P APP PRP V
Sbjct: 960 RSPALPPPVPPREAPPIPKRNPPPLGAPPKVPEGARAPPPLPPRPKV 1006
>U50310-5|AAA92541.1| 318|Caenorhabditis elegans Ground-like (grd
related) protein 9 protein.
Length = 318
Score = 28.7 bits (61), Expect = 6.8
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 627 PXPPSPPPRXXPPXP 671
P PPSPPP PP P
Sbjct: 135 PPPPSPPPPPPPPPP 149
>U49945-3|AAM51509.1| 1408|Caenorhabditis elegans Aboc, expulsion
defective protein3, isoform b protein.
Length = 1408
Score = 28.7 bits (61), Expect = 6.8
Identities = 18/47 (38%), Positives = 19/47 (40%), Gaps = 3/47 (6%)
Frame = -3
Query: 856 RXPXARPPXXXR--PXAPTRAPXXTX-PHRXPPXXXAPPRXXPRPPV 725
R P PP R P P R P P + P APP PRP V
Sbjct: 960 RSPALPPPVPPREAPPIPKRNPPPLGAPPKVPEGARAPPPLPPRPKV 1006
>U49945-2|AAC47926.1| 1409|Caenorhabditis elegans Aboc, expulsion
defective protein3, isoform a protein.
Length = 1409
Score = 28.7 bits (61), Expect = 6.8
Identities = 18/47 (38%), Positives = 19/47 (40%), Gaps = 3/47 (6%)
Frame = -3
Query: 856 RXPXARPPXXXR--PXAPTRAPXXTX-PHRXPPXXXAPPRXXPRPPV 725
R P PP R P P R P P + P APP PRP V
Sbjct: 960 RSPALPPPVPPREAPPIPKRNPPPLGAPPKVPEGARAPPPLPPRPKV 1006
>Z92831-7|CAB07369.2| 2396|Caenorhabditis elegans Hypothetical protein
F22G12.5 protein.
Length = 2396
Score = 28.3 bits (60), Expect = 9.0
Identities = 18/47 (38%), Positives = 18/47 (38%)
Frame = +2
Query: 422 RGXPXTHSXFSPXTPXXXXPPXXXXPPXPXXXXTIPXGPXPPSSXXP 562
RG P S P T P PP P TI P PPSS P
Sbjct: 1484 RGSPIRTSSPVPSTQTTPSRPPQMPPPPPASGKTI---PPPPSSSTP 1527
>Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical
protein T21B4.2 protein.
Length = 312
Score = 28.3 bits (60), Expect = 9.0
Identities = 25/83 (30%), Positives = 25/83 (30%), Gaps = 3/83 (3%)
Frame = -2
Query: 968 PXPXXXGGXALRAXAXGXXXAXPXTPRGG--XPGXXPAXPXXXXAXPXRXATGRPD-PXA 798
P P G A A G A TP GG P P P G P P A
Sbjct: 171 PGPAGPAGNAGPPGAPGGPGAPGNTPSGGAAGPPGPPGPPGGPGNDGQPGGPGNPGAPGA 230
Query: 797 XXXAPXSXXPXRPRAXAXXPPXP 729
P P P A PP P
Sbjct: 231 VTEVPGQQGPPGPPGPA-GPPGP 252
>Z81066-8|CAB02974.2| 2396|Caenorhabditis elegans Hypothetical protein
F22G12.5 protein.
Length = 2396
Score = 28.3 bits (60), Expect = 9.0
Identities = 18/47 (38%), Positives = 18/47 (38%)
Frame = +2
Query: 422 RGXPXTHSXFSPXTPXXXXPPXXXXPPXPXXXXTIPXGPXPPSSXXP 562
RG P S P T P PP P TI P PPSS P
Sbjct: 1484 RGSPIRTSSPVPSTQTTPSRPPQMPPPPPASGKTI---PPPPSSSTP 1527
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.3 bits (60), Expect = 9.0
Identities = 23/83 (27%), Positives = 23/83 (27%)
Frame = -3
Query: 649 GGGEGGXGXXXVVXXGXXXXXXXXXXXXXXXXRXXGXGXXGNCXXXXWXRGRXGXWGXGX 470
GGG GG G G G G G C G G G G
Sbjct: 56 GGGCGGGGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGG-GGCGGGGGCGGGGGGCGGGG 114
Query: 469 XGCXXGKXXVGGXXPPXXXXGGG 401
GC G GG GGG
Sbjct: 115 GGCGGGGGGCGGGGGGCGGGGGG 137
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.3 bits (60), Expect = 9.0
Identities = 23/83 (27%), Positives = 23/83 (27%)
Frame = -3
Query: 649 GGGEGGXGXXXVVXXGXXXXXXXXXXXXXXXXRXXGXGXXGNCXXXXWXRGRXGXWGXGX 470
GGG GG G G G G G C G G G G
Sbjct: 56 GGGCGGGGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGG-GGCGGGGGCGGGGGGCGGGG 114
Query: 469 XGCXXGKXXVGGXXPPXXXXGGG 401
GC G GG GGG
Sbjct: 115 GGCGGGGGGCGGGGGGCGGGGGG 137
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 28.3 bits (60), Expect = 9.0
Identities = 20/44 (45%), Positives = 22/44 (50%)
Frame = +3
Query: 729 GGRGXXRGGAXXXGGXRXGXVXXGARVGAXGRXXXGGRAXGXRR 860
GG G RGGA GG R G G+ GA G GG+ G RR
Sbjct: 786 GGAGGARGGAR--GGARGG-ARGGSSRGARGGARGGGK-FGNRR 825
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,183,957
Number of Sequences: 27780
Number of extensions: 204111
Number of successful extensions: 1961
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 744
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1609
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2594635024
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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