Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP15_F_C03
         (884 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_04_0628 + 24589313-24589472,24589604-24589765,24589850-245899...    33   0.40 
09_06_0292 + 22075647-22075691,22077394-22077507,22077602-220778...    31   1.2  
11_06_0201 + 21178784-21179047,21179519-21180064                       29   5.0  
08_02_0909 - 22515326-22515418,22515992-22516150,22516583-225166...    28   8.7  

>02_04_0628 +
           24589313-24589472,24589604-24589765,24589850-24589983,
           24590108-24590275,24590481-24590562,24590734-24591512
          Length = 494

 Score = 32.7 bits (71), Expect = 0.40
 Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
 Frame = -1

Query: 572 RLVFCDQIPS--RPYRRLRCGCSYQDPTHRSPR 480
           R++ CD  PS  R   RL C CSYQ    +SPR
Sbjct: 29  RILLCDSDPSSSREVLRLLCNCSYQVTCAKSPR 61


>09_06_0292 +
           22075647-22075691,22077394-22077507,22077602-22077841,
           22077926-22078003,22078094-22078162,22078420-22078545,
           22079108-22079188,22079272-22079460,22079597-22080434,
           22082290-22082411,22082482-22082701,22082910-22083055,
           22083260-22083566,22083886-22084136,22084294-22084533,
           22084930-22085238
          Length = 1124

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 25/84 (29%), Positives = 37/84 (44%), Gaps = 1/84 (1%)
 Frame = +2

Query: 185 PIFKATPPLTSRGTREWEEGR-SSALWDRTTMDYSVKPVTTERFSMMTAVS*PARLTAPG 361
           P  + T P+    T    E R +S +WD+    Y   P  T     +  +  PAR T   
Sbjct: 487 PTTQITNPMFQSATSYVRENRRASVVWDQEAGRYVSVPAQTRA---VPGLDLPAR-TPRF 542

Query: 362 XLGPGGDSTNYGGRLDWANKNAQA 433
              P G+S+N+G  L  AN ++ A
Sbjct: 543 LANPTGESSNHGKNLAPANASSSA 566


>11_06_0201 + 21178784-21179047,21179519-21180064
          Length = 269

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 23/65 (35%), Positives = 25/65 (38%), Gaps = 2/65 (3%)
 Frame = +2

Query: 311 FSMMTAVS*PARLTAPGXLGPGGDSTNYGGRLDWANKNAQAAID--INRQIGGRSGMTAS 484
           F    AVS PA L A   LGPGG   +  G L  A   A A     + R   G  G    
Sbjct: 72  FPAAEAVSSPAELPATQLLGPGGGGVSPRGWLALARTRAPAIAGGFLARGAPGGRGGVVF 131

Query: 485 GSGVW 499
             G W
Sbjct: 132 PDGSW 136


>08_02_0909 -
           22515326-22515418,22515992-22516150,22516583-22516658,
           22517980-22518141,22518826-22519259,22519723-22521414
          Length = 871

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 23/84 (27%), Positives = 37/84 (44%), Gaps = 10/84 (11%)
 Frame = +2

Query: 350 TAPGXLGPGGDSTNYGG----------RLDWANKNAQAAIDINRQIGGRSGMTASGSGVW 499
           T+ G  G GG+   +GG           L   ++ A+ ++++  Q+GG  G+ ++G G  
Sbjct: 103 TSAGEFGGGGEVRVWGGGNRSGEAAFISLQSGSRVAKRSMELGVQMGGEMGLGSNGGG-- 160

Query: 500 DLDKNTHISAGGMVSKEFGHRRPD 571
                    AGG V  E  HR  D
Sbjct: 161 --------GAGGQVHDEMPHRNVD 176


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,099,679
Number of Sequences: 37544
Number of extensions: 555718
Number of successful extensions: 1259
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1215
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1257
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2503236492
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)