Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP15_F_C01
         (915 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH trans...    24   1.4  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    24   1.9  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    23   4.4  

>AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH
           transcription factor protein.
          Length = 193

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 7/39 (17%)
 Frame = +1

Query: 184 RRDAPDFFKDIEH-----HTKEFHKT--LEQQFNSLTKS 279
           RR AP  F+DI+H     + +E  +T  L + F SL KS
Sbjct: 84  RRKAPQSFEDIQHQRVMANVRERQRTQSLNEAFASLRKS 122


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -1

Query: 120 CTVERLSGGGRCEPDCN 70
           C V+R  G GRC+ +CN
Sbjct: 493 CPVKR--GNGRCDEECN 507


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = -2

Query: 287 ASFDLVSELNCCSKVLWNSLV 225
           A  D  SE++C S+ +W+ L+
Sbjct: 102 ALLDTGSEVSCISEEVWSKLI 122


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.311    0.124    0.357 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,742
Number of Sequences: 336
Number of extensions: 2300
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 25547951
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)