Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP15_F_C01
(915 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 38 0.002
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 31 0.17
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 30 0.40
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 30 0.53
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 29 1.2
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 28 1.6
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 28 1.6
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 28 1.6
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 28 2.1
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 27 3.7
SPAC22F8.11 |plc1||phosphoinositide phospholipase C Plc1|Schizos... 27 4.9
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 27 4.9
SPAPB1A10.08 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 26 6.5
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 26 6.5
SPBC29A10.13 |atp7||F0-ATPase subunit D|Schizosaccharomyces pomb... 26 6.5
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 37.9 bits (84), Expect = 0.002
Identities = 17/37 (45%), Positives = 17/37 (45%)
Frame = +2
Query: 800 PPAPXXXPXPPRAPPXLPXPXPXXLDXAXRAQPHLPP 910
PP P PP APP LP P L A P LPP
Sbjct: 415 PPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPP 451
Score = 29.9 bits (64), Expect = 0.53
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = +2
Query: 788 PPPXPPAPXXXPXPPRAPPXLPXPXPXXLDXAXRAQPHLPPP 913
PP PP+ PP +PP P ++P LPPP
Sbjct: 254 PPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPLPPP 295
Score = 28.7 bits (61), Expect = 1.2
Identities = 21/51 (41%), Positives = 21/51 (41%), Gaps = 9/51 (17%)
Frame = +2
Query: 788 PPPXPP-----APXXXPXPPRAP--PXLP--XPXPXXLDXAXRAQPHLPPP 913
PP PP AP P PP AP P LP P L A A P P P
Sbjct: 432 PPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAP 482
Score = 27.9 bits (59), Expect = 2.1
Identities = 16/44 (36%), Positives = 16/44 (36%), Gaps = 3/44 (6%)
Frame = +2
Query: 791 PPXPPAPXXXPX-PPRAPPXLPXPXPXXLDXAXRAQPHLP--PP 913
PP P P P PP PP P P A P P PP
Sbjct: 415 PPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPP 458
Score = 27.5 bits (58), Expect = 2.8
Identities = 15/42 (35%), Positives = 16/42 (38%), Gaps = 3/42 (7%)
Frame = +2
Query: 788 PPPXPP---APXXXPXPPRAPPXLPXPXPXXLDXAXRAQPHL 904
PPP PP A P PP+ P P P R P L
Sbjct: 338 PPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPL 379
Score = 26.2 bits (55), Expect = 6.5
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = +2
Query: 791 PPXPPAPXXXPXPPRAPPXLP 853
P PP P P PP AP P
Sbjct: 464 PAAPPLPPAAPAPPPAPAPAP 484
Score = 25.8 bits (54), Expect = 8.6
Identities = 14/42 (33%), Positives = 16/42 (38%)
Frame = +2
Query: 788 PPPXPPAPXXXPXPPRAPPXLPXPXPXXLDXAXRAQPHLPPP 913
PP AP P PPR+ P P + P PPP
Sbjct: 354 PPQGRSAPP--PPPPRSAPSTGRQPPPLSSSRAVSNPPAPPP 393
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 31.5 bits (68), Expect = 0.17
Identities = 20/49 (40%), Positives = 20/49 (40%), Gaps = 7/49 (14%)
Frame = +2
Query: 788 PPPXP------PAPXXXPXPPRAP-PXLPXPXPXXLDXAXRAQPHLPPP 913
PPP P PAP P PP AP P P P A P PPP
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 27.9 bits (59), Expect = 2.1
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = +2
Query: 791 PPXPPAPXXXPXPPRAPPXLPXPXP 865
PP PP P P AP +P P P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAP 756
Score = 27.1 bits (57), Expect = 3.7
Identities = 16/43 (37%), Positives = 17/43 (39%), Gaps = 1/43 (2%)
Frame = +2
Query: 788 PPPXP-PAPXXXPXPPRAPPXLPXPXPXXLDXAXRAQPHLPPP 913
P P P P P P P P P P P + A P PPP
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPP-PPPPPPGVAGAGPPPPPPPPP 783
Score = 26.6 bits (56), Expect = 4.9
Identities = 14/41 (34%), Positives = 17/41 (41%), Gaps = 4/41 (9%)
Frame = +2
Query: 788 PPPXPPAP----XXXPXPPRAPPXLPXPXPXXLDXAXRAQP 898
PPP PP P P PP PP + A +A+P
Sbjct: 761 PPPPPPPPGVAGAGPPPPPPPPPAVSAGGSRYYAPAPQAEP 801
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 30.3 bits (65), Expect = 0.40
Identities = 14/26 (53%), Positives = 14/26 (53%)
Frame = -1
Query: 864 GXGXGSXGGARGGXGXXXGAGGXGGG 787
G G GGARGG G GA G GG
Sbjct: 34 GARGGGRGGARGGRGGRGGARGGRGG 59
Score = 28.7 bits (61), Expect = 1.2
Identities = 13/23 (56%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
Frame = -1
Query: 852 GSXGGARGGXGXXXGA-GGXGGG 787
G GG+RGG G G GG GGG
Sbjct: 9 GGRGGSRGGRGGFNGGRGGFGGG 31
Score = 28.7 bits (61), Expect = 1.2
Identities = 14/25 (56%), Positives = 14/25 (56%), Gaps = 1/25 (4%)
Frame = -1
Query: 858 GXGSXGGARGGXGXXXGA-GGXGGG 787
G G GGARGG G G GG GG
Sbjct: 46 GRGGRGGARGGRGGSSGGRGGAKGG 70
Score = 26.6 bits (56), Expect = 4.9
Identities = 14/27 (51%), Positives = 14/27 (51%), Gaps = 2/27 (7%)
Frame = -1
Query: 864 GXGXGSXGGARGG--XGXXXGAGGXGG 790
G G GGARGG G G GG GG
Sbjct: 26 GGFGGGRGGARGGGRGGARGGRGGRGG 52
Score = 25.8 bits (54), Expect = 8.6
Identities = 13/27 (48%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
Frame = -1
Query: 864 GXGXGSXGGARGG-XGXXXGAGGXGGG 787
G G+ GG RGG G G GG GG
Sbjct: 30 GGRGGARGGGRGGARGGRGGRGGARGG 56
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 29.9 bits (64), Expect = 0.53
Identities = 16/44 (36%), Positives = 17/44 (38%), Gaps = 2/44 (4%)
Frame = +2
Query: 788 PPPXPPAPXXXPXPPRAPP--XLPXPXPXXLDXAXRAQPHLPPP 913
PPP PP PP A P LP P A P +P P
Sbjct: 1882 PPPPPPMALPKAGPPSAAPTSALPPAGPPAGATAISGNPGMPAP 1925
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 28.7 bits (61), Expect = 1.2
Identities = 18/49 (36%), Positives = 20/49 (40%), Gaps = 8/49 (16%)
Frame = +2
Query: 788 PPPXPPAPXXXPXPPRA--------PPXLPXPXPXXLDXAXRAQPHLPP 910
PPP PA P PP A PP + P P L + P LPP
Sbjct: 1010 PPPKQPANRVVPLPPTASQRASAYEPPTVSVPSPSALSPS--VTPQLPP 1056
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 28.3 bits (60), Expect = 1.6
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 791 PPXPPAPXXXPXPPRAPPXLPXP 859
P PP P P PP APP P
Sbjct: 1705 PTPPPPPMSVPPPPSAPPMPAGP 1727
Score = 27.1 bits (57), Expect = 3.7
Identities = 14/44 (31%), Positives = 15/44 (34%), Gaps = 2/44 (4%)
Frame = +2
Query: 788 PP--PXPPAPXXXPXPPRAPPXLPXPXPXXLDXAXRAQPHLPPP 913
PP P AP P PP + P P P PPP
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPP 1733
Score = 25.8 bits (54), Expect = 8.6
Identities = 12/28 (42%), Positives = 12/28 (42%), Gaps = 2/28 (7%)
Frame = +2
Query: 788 PPPX--PPAPXXXPXPPRAPPXLPXPXP 865
PPP PP P P P P P P P
Sbjct: 1709 PPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 28.3 bits (60), Expect = 1.6
Identities = 13/42 (30%), Positives = 18/42 (42%)
Frame = +2
Query: 788 PPPXPPAPXXXPXPPRAPPXLPXPXPXXLDXAXRAQPHLPPP 913
P P PP P PP++ P P +Q ++PPP
Sbjct: 234 PLPAPPPPPPPTLPPQSTNTSQLPMPSRNVNNLGSQVNIPPP 275
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 28.3 bits (60), Expect = 1.6
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -1
Query: 843 GGARGGXGXXXGAGGXGG 790
GG+RGG G G GG GG
Sbjct: 447 GGSRGGRGGFGGRGGFGG 464
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 27.9 bits (59), Expect = 2.1
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +2
Query: 788 PPPXPPAPXXXPXPPRAPPXLPXP 859
PPP PP P PP PP P P
Sbjct: 9 PPPPPPPPGF--EPPSQPPPPPPP 30
Score = 25.8 bits (54), Expect = 8.6
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +2
Query: 788 PPPXPPAPXXXPXPPRAPPXLPXPXP 865
PP PP P P P PP P P P
Sbjct: 5 PPGNPPPPP--PPPGFEPPSQPPPPP 28
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 27.1 bits (57), Expect = 3.7
Identities = 14/43 (32%), Positives = 16/43 (37%), Gaps = 1/43 (2%)
Frame = +2
Query: 788 PPPXPPAPXXXPXPPRAPPXLPXPXPXXLD-XAXRAQPHLPPP 913
P PP P P APP +P P A P +P P
Sbjct: 1046 PTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAP 1088
Score = 26.6 bits (56), Expect = 4.9
Identities = 13/38 (34%), Positives = 14/38 (36%)
Frame = +2
Query: 800 PPAPXXXPXPPRAPPXLPXPXPXXLDXAXRAQPHLPPP 913
PP P PP P P P A A P +P P
Sbjct: 1032 PPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAP 1069
>SPAC22F8.11 |plc1||phosphoinositide phospholipase C
Plc1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 899
Score = 26.6 bits (56), Expect = 4.9
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +1
Query: 184 RRDAPDFFKDIEHHTKEFHKTLEQQFNSLT 273
++ DFFK + ++ H TL ++ NSL+
Sbjct: 56 KKSEQDFFKMLSSRDRDAHSTLRKRSNSLS 85
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 26.6 bits (56), Expect = 4.9
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = -1
Query: 864 GXGXGSXGGARGGXGXXXGAGGXGGG 787
G G GG+RGG G GG GGG
Sbjct: 141 GGFRGGRGGSRGGFG-GNSRGGFGGG 165
>SPAPB1A10.08 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 412
Score = 26.2 bits (55), Expect = 6.5
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +1
Query: 169 KAAMVRRDAPDFFKDIEHHTKEFHKTLEQQFNSLTKSKDA 288
K+ V R F + +EH+ K+LE+Q + L +SKDA
Sbjct: 195 KSKSVPRLRGQFMEPVEHN-HPLSKSLEEQSSFLEQSKDA 233
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 26.2 bits (55), Expect = 6.5
Identities = 14/41 (34%), Positives = 15/41 (36%)
Frame = +2
Query: 788 PPPXPPAPXXXPXPPRAPPXLPXPXPXXLDXAXRAQPHLPP 910
P PP P P P A P P P A P +PP
Sbjct: 161 PSKAPPIPSSLPPP--AQPAAPVKSPPSAPSLPSAVPPMPP 199
Score = 25.8 bits (54), Expect = 8.6
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +2
Query: 788 PPPXPPAPXXXPXPPRAPPXL 850
PPP PPAP P APP +
Sbjct: 5 PPPPPPAPAPAAAAP-APPLM 24
Score = 25.8 bits (54), Expect = 8.6
Identities = 15/45 (33%), Positives = 16/45 (35%), Gaps = 4/45 (8%)
Frame = +2
Query: 791 PPXPPA----PXXXPXPPRAPPXLPXPXPXXLDXAXRAQPHLPPP 913
PP P + P P P PP P P A LPPP
Sbjct: 130 PPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPP 174
>SPBC29A10.13 |atp7||F0-ATPase subunit D|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 175
Score = 26.2 bits (55), Expect = 6.5
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = +2
Query: 407 LEQSRQNIERTAEELRKAHPDVEK 478
+EQ+R E T E++++A P++EK
Sbjct: 126 IEQARPTEEITIEDMKQAVPEIEK 149
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.311 0.124 0.357
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,308,231
Number of Sequences: 5004
Number of extensions: 34629
Number of successful extensions: 199
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 92
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 165
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 464508080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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