Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP15_F_B13
(960 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z77662-15|CAI79240.1| 255|Caenorhabditis elegans Hypothetical p... 38 0.014
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 33 0.23
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 33 0.30
AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical ... 31 0.93
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 31 1.2
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 30 2.1
U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical pr... 30 2.1
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 30 2.1
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 29 3.7
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 29 3.7
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 29 3.7
AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical... 29 3.7
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 29 3.7
AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA topoisome... 29 3.7
AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical ... 29 3.7
Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical pr... 29 4.9
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 29 4.9
Z77662-14|CAI79239.1| 245|Caenorhabditis elegans Hypothetical p... 29 4.9
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 29 4.9
U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astaci... 29 4.9
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 4.9
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 4.9
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 4.9
Z77662-5|CAB01192.2| 579|Caenorhabditis elegans Hypothetical pr... 29 6.5
U80451-8|AAB37842.2| 288|Caenorhabditis elegans Collagen protei... 29 6.5
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 29 6.5
U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter... 29 6.5
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 29 6.5
AF047659-10|AAC04430.1| 798|Caenorhabditis elegans Hypothetical... 29 6.5
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 29 6.5
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 28 8.6
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 28 8.6
U55366-3|AAY86188.1| 118|Caenorhabditis elegans Hypothetical pr... 28 8.6
U52002-6|AAB37732.1| 142|Caenorhabditis elegans Hypothetical pr... 28 8.6
AL032646-7|CAA21680.1| 485|Caenorhabditis elegans Hypothetical ... 28 8.6
AF047656-13|AAC05105.1| 313|Caenorhabditis elegans Collagen pro... 28 8.6
>Z77662-15|CAI79240.1| 255|Caenorhabditis elegans Hypothetical
protein F47B8.14 protein.
Length = 255
Score = 37.5 bits (83), Expect = 0.014
Identities = 18/44 (40%), Positives = 18/44 (40%)
Frame = -1
Query: 408 YXRGXGGXGXXGGRGGGXXXGXPPPGXXXAPXXPAXRFXPRGXP 277
Y G GG G GG GGG PPP A PA P P
Sbjct: 20 YSSGGGGGGYSGGGGGGGDAAPPPPPPADAAPAPAPAPEPEAAP 63
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 33.5 bits (73), Expect = 0.23
Identities = 17/38 (44%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Frame = +2
Query: 284 PLGXKRXAGXXGAXXXPG-GGXPXXXPPPRPPXXPXPP 394
P G AG GA PG G PPP PP P PP
Sbjct: 185 PPGPDGNAGPAGAPGVPGPDGDAGSPPPPGPPGPPGPP 222
Score = 30.3 bits (65), Expect = 2.1
Identities = 15/44 (34%), Positives = 15/44 (34%)
Frame = -1
Query: 408 YXRGXGGXGXXGGRGGGXXXGXPPPGXXXAPXXPAXRFXPRGXP 277
Y G GG G GG GGG G P P G P
Sbjct: 108 YAAGGGGGGGGGGGGGGCHCAAQASGCPAGPPGPPGEAGTDGEP 151
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 33.1 bits (72), Expect = 0.30
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = +3
Query: 603 PPGXPXPXPTPXXPPPXRPXPPXRXP 680
PPG P P P PP P PP R P
Sbjct: 243 PPGPPGPPGPPTRRPPGPPGPPTRRP 268
Score = 28.7 bits (61), Expect = 6.5
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = +3
Query: 603 PPGXPXPXPTPXXPPPXRPXPPXRXP 680
PPG P P P PP P PP R P
Sbjct: 257 PPGPPGP---PTRRPPGPPGPPTRRP 279
>AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical
protein ZC123.1 protein.
Length = 730
Score = 31.5 bits (68), Expect = 0.93
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +3
Query: 603 PPGXPXPXPTPXXPPPXRPXPP 668
PP P PTP PPP P PP
Sbjct: 128 PPRTCCPPPTPAAPPPPPPPPP 149
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 31.1 bits (67), Expect = 1.2
Identities = 17/42 (40%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Frame = -1
Query: 399 GXGGXGXXGG-RGGGXXXGXPPPGXXXAPXXPAXRFXPRGXP 277
G G G G +GG G PPPG A P F P G P
Sbjct: 416 GPGAPGSYGPPQGGPGGFGPPPPGGPGAYGPPPTGFPPVGAP 457
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 30.3 bits (65), Expect = 2.1
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +3
Query: 603 PPGXPXPXPTPXXPPPXRPXPPXRXP 680
PP P P P PPP P PP P
Sbjct: 57 PPPPMCPPPPPPPPPPMCPPPPPPMP 82
Score = 28.7 bits (61), Expect = 6.5
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 347 PXXXPPPRPPXXPXPPXP 400
P PPP PP P PP P
Sbjct: 63 PPPPPPPPPPMCPPPPPP 80
>U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical
protein R144.4a protein.
Length = 360
Score = 30.3 bits (65), Expect = 2.1
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +3
Query: 603 PPGXPXPXPTPXXPPPXRPXPP 668
PP P P P P PPP PP
Sbjct: 2 PPPPPPPPPPPPPPPPAASAPP 23
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical
protein R144.4b protein.
Length = 362
Score = 30.3 bits (65), Expect = 2.1
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +3
Query: 603 PPGXPXPXPTPXXPPPXRPXPP 668
PP P P P P PPP PP
Sbjct: 2 PPPPPPPPPPPPPPPPAASAPP 23
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 29.5 bits (63), Expect = 3.7
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = -1
Query: 402 RGXGGXGXXGGRGGGXXXG 346
RG GG G GGRGGG G
Sbjct: 29 RGGGGGGYSGGRGGGYGGG 47
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 29.5 bits (63), Expect = 3.7
Identities = 14/32 (43%), Positives = 14/32 (43%), Gaps = 3/32 (9%)
Frame = +3
Query: 582 PXXXGXXPP---GXPXPXPTPXXPPPXRPXPP 668
P G PP G P P P P PP P PP
Sbjct: 745 PPPPGGLPPISGGPPPPPPPPGGCPPPPPPPP 776
Score = 29.1 bits (62), Expect = 4.9
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +3
Query: 573 GXXPXXXGXXPPGXPXPXPTPXXPPPXRP 659
G P G PP P P P PPP P
Sbjct: 749 GGLPPISGGPPPPPPPPGGCPPPPPPPPP 777
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 29.5 bits (63), Expect = 3.7
Identities = 14/32 (43%), Positives = 14/32 (43%), Gaps = 3/32 (9%)
Frame = +3
Query: 582 PXXXGXXPP---GXPXPXPTPXXPPPXRPXPP 668
P G PP G P P P P PP P PP
Sbjct: 745 PPPPGGLPPISGGPPPPPPPPGGCPPPPPPPP 776
Score = 29.1 bits (62), Expect = 4.9
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +3
Query: 573 GXXPXXXGXXPPGXPXPXPTPXXPPPXRP 659
G P G PP P P P PPP P
Sbjct: 749 GGLPPISGGPPPPPPPPGGCPPPPPPPPP 777
>AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical
protein Y56A3A.27 protein.
Length = 759
Score = 29.5 bits (63), Expect = 3.7
Identities = 16/43 (37%), Positives = 17/43 (39%), Gaps = 1/43 (2%)
Frame = +2
Query: 278 GXPLGXKRXAGXXGAXXXPGGGXPXXXP-PPRPPXXPXPPXPR 403
G P G G GGG P P PP+PP P PR
Sbjct: 616 GGPGGPGGGGGPPRGPGGGGGGGPTGPPAPPKPPAKPRGRPPR 658
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 29.5 bits (63), Expect = 3.7
Identities = 14/32 (43%), Positives = 14/32 (43%), Gaps = 3/32 (9%)
Frame = +3
Query: 582 PXXXGXXPP---GXPXPXPTPXXPPPXRPXPP 668
P G PP G P P P P PP P PP
Sbjct: 328 PPPPGGLPPISGGPPPPPPPPGGCPPPPPPPP 359
Score = 29.1 bits (62), Expect = 4.9
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +3
Query: 573 GXXPXXXGXXPPGXPXPXPTPXXPPPXRP 659
G P G PP P P P PPP P
Sbjct: 332 GGLPPISGGPPPPPPPPGGCPPPPPPPPP 360
>AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA
topoisomerase III protein.
Length = 759
Score = 29.5 bits (63), Expect = 3.7
Identities = 16/43 (37%), Positives = 17/43 (39%), Gaps = 1/43 (2%)
Frame = +2
Query: 278 GXPLGXKRXAGXXGAXXXPGGGXPXXXP-PPRPPXXPXPPXPR 403
G P G G GGG P P PP+PP P PR
Sbjct: 616 GGPGGPGGGGGPPRGPGGGGGGGPTGPPAPPKPPAKPRGRPPR 658
>AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical
protein Y53G8AR.9 protein.
Length = 315
Score = 29.5 bits (63), Expect = 3.7
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = -1
Query: 399 GXGGXGXXGGRGGGXXXGXPPP 334
G GG G GG GGG PPP
Sbjct: 194 GMGGGGGSGGSGGGSGRFPPPP 215
>Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical
protein Y48E1B.1 protein.
Length = 497
Score = 29.1 bits (62), Expect = 4.9
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +3
Query: 603 PPGXPXPXPTPXXPPPXRPXPP 668
PP P P P PPP P PP
Sbjct: 349 PPIISPPAPPPPPPPPPPPPPP 370
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 29.1 bits (62), Expect = 4.9
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = -1
Query: 399 GXGGXGXXGGRGGGXXXGXPPP 334
G GG G GG GGG PPP
Sbjct: 38 GGGGCGGGGGCGGGCAPPPPPP 59
Score = 29.1 bits (62), Expect = 4.9
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = -1
Query: 399 GXGGXGXXGGRGGGXXXGXPPP 334
G GG G GG GGG PPP
Sbjct: 95 GGGGCGGGGGCGGGCAPPPPPP 116
>Z77662-14|CAI79239.1| 245|Caenorhabditis elegans Hypothetical
protein F47B8.13 protein.
Length = 245
Score = 29.1 bits (62), Expect = 4.9
Identities = 15/41 (36%), Positives = 15/41 (36%)
Frame = -1
Query: 399 GXGGXGXXGGRGGGXXXGXPPPGXXXAPXXPAXRFXPRGXP 277
G GG G G GG PPP A PA P P
Sbjct: 20 GGGGGGEAGYSGGAGVEAPPPPPPADAAPAPAPEPAPAPAP 60
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 29.1 bits (62), Expect = 4.9
Identities = 13/25 (52%), Positives = 13/25 (52%), Gaps = 2/25 (8%)
Frame = +2
Query: 335 GGGXPXXXPPPRPPXXPXP--PXPR 403
GG P PPPR P P P P PR
Sbjct: 134 GGSSPPPPPPPRVPRTPPPRSPPPR 158
Score = 28.7 bits (61), Expect = 6.5
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = +3
Query: 594 GXXPPGXPXPXPTPXXPPPXRPXPPXRXP 680
G P P P P PPP P PP R P
Sbjct: 134 GGSSPPPPPPPRVPRTPPPRSP-PPRRPP 161
>U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astacin
protease protein33 protein.
Length = 644
Score = 29.1 bits (62), Expect = 4.9
Identities = 14/31 (45%), Positives = 14/31 (45%), Gaps = 2/31 (6%)
Frame = +3
Query: 594 GXXPPGXPXPXPTPXXPPP--XRPXPPXRXP 680
G PP P P PPP RP PP R P
Sbjct: 39 GPPPPWHRNRGPPPFGPPPPWDRPPPPWRRP 69
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.1 bits (62), Expect = 4.9
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = +2
Query: 332 PGGGXPXXXPPPRPPXXPXPPXPR 403
P GG P PPPR P PP PR
Sbjct: 284 PAGGSP---PPPRAGSPPPPPPPR 304
Score = 28.3 bits (60), Expect = 8.6
Identities = 15/41 (36%), Positives = 15/41 (36%), Gaps = 3/41 (7%)
Frame = +3
Query: 567 AXGXXPXXXGXXPP---GXPXPXPTPXXPPPXRPXPPXRXP 680
A P G PP G P P P PPP R P P
Sbjct: 261 AGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPP 301
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.1 bits (62), Expect = 4.9
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = +2
Query: 332 PGGGXPXXXPPPRPPXXPXPPXPR 403
P GG P PPPR P PP PR
Sbjct: 305 PAGGSP---PPPRAGSPPPPPPPR 325
Score = 28.3 bits (60), Expect = 8.6
Identities = 15/41 (36%), Positives = 15/41 (36%), Gaps = 3/41 (7%)
Frame = +3
Query: 567 AXGXXPXXXGXXPP---GXPXPXPTPXXPPPXRPXPPXRXP 680
A P G PP G P P P PPP R P P
Sbjct: 282 AGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPP 322
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.1 bits (62), Expect = 4.9
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = +2
Query: 332 PGGGXPXXXPPPRPPXXPXPPXPR 403
P GG P PPPR P PP PR
Sbjct: 290 PAGGSP---PPPRAGSPPPPPPPR 310
Score = 28.3 bits (60), Expect = 8.6
Identities = 15/41 (36%), Positives = 15/41 (36%), Gaps = 3/41 (7%)
Frame = +3
Query: 567 AXGXXPXXXGXXPP---GXPXPXPTPXXPPPXRPXPPXRXP 680
A P G PP G P P P PPP R P P
Sbjct: 267 AGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPP 307
>Z77662-5|CAB01192.2| 579|Caenorhabditis elegans Hypothetical
protein F47B8.5 protein.
Length = 579
Score = 28.7 bits (61), Expect = 6.5
Identities = 17/44 (38%), Positives = 17/44 (38%)
Frame = -1
Query: 408 YXRGXGGXGXXGGRGGGXXXGXPPPGXXXAPXXPAXRFXPRGXP 277
Y G GG G GG GGG PP A PA P P
Sbjct: 386 YSSGGGGGGYSGGGGGGG--EAAPPSSPPADAAPAPPPAPEPVP 427
>U80451-8|AAB37842.2| 288|Caenorhabditis elegans Collagen protein
20 protein.
Length = 288
Score = 28.7 bits (61), Expect = 6.5
Identities = 17/37 (45%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Frame = -1
Query: 384 GXXGGRGGGXXXGXP-PPGXXXAPXXPAXRFXPRGXP 277
G G GG G P PPG P PA R PRG P
Sbjct: 147 GPAGPAGGPGPKGPPGPPGGHGEPG-PAGRGGPRGPP 182
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 28.7 bits (61), Expect = 6.5
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = -1
Query: 408 YXRGXGGXGXXGGRGGG 358
+ RG GG G GGRGGG
Sbjct: 55 WGRGGGGSGWGGGRGGG 71
>U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 3 protein.
Length = 302
Score = 28.7 bits (61), Expect = 6.5
Identities = 18/49 (36%), Positives = 20/49 (40%), Gaps = 7/49 (14%)
Frame = +2
Query: 278 GXPLGXKRXAGXXGAXXXPGGGXPXXXP-------PPRPPXXPXPPXPR 403
G P G +G GA PG P P PP PP P PP P+
Sbjct: 189 GLP-GPPGPSGPQGAPGVPGEKGPTGEPGKVINGAPPGPPGPPGPPGPQ 236
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 28.7 bits (61), Expect = 6.5
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 347 PXXXPPPRPPXXPXPPXP 400
P PPP PP P PP P
Sbjct: 68 PPICPPPPPPPMPCPPPP 85
>AF047659-10|AAC04430.1| 798|Caenorhabditis elegans Hypothetical
protein K07H8.10 protein.
Length = 798
Score = 28.7 bits (61), Expect = 6.5
Identities = 14/24 (58%), Positives = 14/24 (58%)
Frame = -1
Query: 402 RGXGGXGXXGGRGGGXXXGXPPPG 331
RG GG G GGRGGG G P G
Sbjct: 7 RGRGGGGFRGGRGGG--SGFTPRG 28
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 28.7 bits (61), Expect = 6.5
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +3
Query: 567 AXGXXPXXXGXXPPGXPXPXPTPXXPPPXRPXPP 668
A P P P P PTP PP P PP
Sbjct: 1100 AQSVTPMASHIVPVAAPVPVPTPFTIPPPVPPPP 1133
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.3 bits (60), Expect = 8.6
Identities = 14/37 (37%), Positives = 15/37 (40%)
Frame = +2
Query: 290 GXKRXAGXXGAXXXPGGGXPXXXPPPRPPXXPXPPXP 400
G G G+ G P PPP PP P PP P
Sbjct: 279 GGGSSGGYAGSSGGGGYSAPAAAPPPPPP-PPPPPAP 314
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.3 bits (60), Expect = 8.6
Identities = 14/37 (37%), Positives = 15/37 (40%)
Frame = +2
Query: 290 GXKRXAGXXGAXXXPGGGXPXXXPPPRPPXXPXPPXP 400
G G G+ G P PPP PP P PP P
Sbjct: 279 GGGSSGGYAGSSGGGGYSAPAAAPPPPPP-PPPPPAP 314
>U55366-3|AAY86188.1| 118|Caenorhabditis elegans Hypothetical
protein F41F3.8 protein.
Length = 118
Score = 28.3 bits (60), Expect = 8.6
Identities = 12/32 (37%), Positives = 13/32 (40%)
Frame = +3
Query: 573 GXXPXXXGXXPPGXPXPXPTPXXPPPXRPXPP 668
G P PP P P P+P PP PP
Sbjct: 36 GCAPRPRVAAPPFAPPPPPSPPLPPKCECPPP 67
>U52002-6|AAB37732.1| 142|Caenorhabditis elegans Hypothetical
protein F08B4.7 protein.
Length = 142
Score = 28.3 bits (60), Expect = 8.6
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +2
Query: 308 GXXGAXXXPGGGXPXXXPPPRPPXXPXPP 394
G G PGG PP PP P PP
Sbjct: 108 GAPGMPPFPGGPMGMAGPPGMPPMMPRPP 136
>AL032646-7|CAA21680.1| 485|Caenorhabditis elegans Hypothetical
protein Y54E2A.8 protein.
Length = 485
Score = 28.3 bits (60), Expect = 8.6
Identities = 12/24 (50%), Positives = 12/24 (50%), Gaps = 2/24 (8%)
Frame = +3
Query: 603 PPGXPXPXPTP--XXPPPXRPXPP 668
PP P P P P PPP P PP
Sbjct: 153 PPPTPIPTPVPILEPPPPPPPVPP 176
>AF047656-13|AAC05105.1| 313|Caenorhabditis elegans Collagen
protein 116 protein.
Length = 313
Score = 28.3 bits (60), Expect = 8.6
Identities = 12/22 (54%), Positives = 12/22 (54%), Gaps = 1/22 (4%)
Frame = +3
Query: 606 PGXPXPXPTPXXP-PPXRPXPP 668
PG P PTP P PP P PP
Sbjct: 177 PGLPGDGPTPGSPGPPGPPGPP 198
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,651,465
Number of Sequences: 27780
Number of extensions: 152865
Number of successful extensions: 3503
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 883
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2822
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2496624284
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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