Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP15_F_B02
(876 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF002198-10|AAF99937.1| 471|Caenorhabditis elegans Hypothetical... 32 0.47
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 31 1.1
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 31 1.1
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 31 1.1
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 31 1.1
Z81103-7|CAB03211.3| 579|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z81103-5|CAD56592.2| 550|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z81088-12|CAD56587.2| 579|Caenorhabditis elegans Hypothetical p... 29 3.3
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 29 3.3
AF326941-1|AAG49391.1| 139|Caenorhabditis elegans 5H1 protein. 29 3.3
AF125955-7|AAD14713.1| 139|Caenorhabditis elegans Hypothetical ... 29 3.3
AF067612-1|AAD36954.1| 780|Caenorhabditis elegans Egg laying de... 29 3.3
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 29 3.3
Z68006-7|CAA91995.2| 783|Caenorhabditis elegans Hypothetical pr... 29 4.4
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 29 4.4
AF497831-1|AAM18109.1| 783|Caenorhabditis elegans putative Na-H... 29 4.4
Z68753-3|CAA92988.3| 984|Caenorhabditis elegans Hypothetical pr... 28 7.6
U21319-7|AAL16307.1| 469|Caenorhabditis elegans Hypothetical pr... 28 7.6
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 28 7.6
L25598-2|AAV58887.1| 780|Caenorhabditis elegans Calpain family ... 28 7.6
>AF002198-10|AAF99937.1| 471|Caenorhabditis elegans Hypothetical
protein F35F10.12 protein.
Length = 471
Score = 32.3 bits (70), Expect = 0.47
Identities = 26/70 (37%), Positives = 30/70 (42%), Gaps = 3/70 (4%)
Frame = +3
Query: 156 DPDPFFAQPT-VGNGYEPIDNRPYIVNPPKDYN--PNGNGYEPIDNGAYYVDRPQGRPYF 326
DP+ +QPT +G G P P V PP Y P +G DNGA P G PY
Sbjct: 345 DPNLPPSQPTPIGGGVAPAGVAPAGVVPPPGYGFLPMTDG---TDNGAGDTPYPVGPPYP 401
Query: 327 KPTPFPGARG 356
P P G
Sbjct: 402 SDVPAPYPSG 411
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 31.1 bits (67), Expect = 1.1
Identities = 18/54 (33%), Positives = 19/54 (35%)
Frame = -1
Query: 858 GGXGAGGSXXGGXGXGXPXAXXXXPGGGRXXXSRXNXPNXGPRXRGXEKEAXGG 697
GG G GG GG G G A GGG S + G G GG
Sbjct: 50 GGSGFGGGNTGGSGFGGGKAGGSGFGGGNTCGSGFGGGSTGGSPYGGASSGFGG 103
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/31 (45%), Positives = 15/31 (48%), Gaps = 3/31 (9%)
Frame = +2
Query: 776 PPPGXXXLAXGXPXPLPPXXDPP---APXPP 859
PPPG + G P P PP PP P PP
Sbjct: 715 PPPGLPPITGGPPPPPPPGGLPPITGGPPPP 745
Score = 30.7 bits (66), Expect = 1.4
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +2
Query: 776 PPPGXXXLAXGXPXPLPPXXDPPAPXPP 859
PP G ++ G P P PP P P PP
Sbjct: 747 PPGGLPPISGGPPPPPPPPGGCPPPPPP 774
Score = 30.3 bits (65), Expect = 1.9
Identities = 14/30 (46%), Positives = 14/30 (46%), Gaps = 2/30 (6%)
Frame = +2
Query: 776 PPPGXXXLAXGXPXPLPPXXD--PPAPXPP 859
PPPG G P P PP PP P PP
Sbjct: 746 PPPGGLPPISGGPPPPPPPPGGCPPPPPPP 775
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/31 (45%), Positives = 15/31 (48%), Gaps = 3/31 (9%)
Frame = +2
Query: 776 PPPGXXXLAXGXPXPLPPXXDPP---APXPP 859
PPPG + G P P PP PP P PP
Sbjct: 715 PPPGLPPITGGPPPPPPPGGLPPITGGPPPP 745
Score = 30.7 bits (66), Expect = 1.4
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +2
Query: 776 PPPGXXXLAXGXPXPLPPXXDPPAPXPP 859
PP G ++ G P P PP P P PP
Sbjct: 747 PPGGLPPISGGPPPPPPPPGGCPPPPPP 774
Score = 30.3 bits (65), Expect = 1.9
Identities = 14/30 (46%), Positives = 14/30 (46%), Gaps = 2/30 (6%)
Frame = +2
Query: 776 PPPGXXXLAXGXPXPLPPXXD--PPAPXPP 859
PPPG G P P PP PP P PP
Sbjct: 746 PPPGGLPPISGGPPPPPPPPGGCPPPPPPP 775
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/31 (45%), Positives = 15/31 (48%), Gaps = 3/31 (9%)
Frame = +2
Query: 776 PPPGXXXLAXGXPXPLPPXXDPP---APXPP 859
PPPG + G P P PP PP P PP
Sbjct: 298 PPPGLPPITGGPPPPPPPGGLPPITGGPPPP 328
Score = 30.7 bits (66), Expect = 1.4
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +2
Query: 776 PPPGXXXLAXGXPXPLPPXXDPPAPXPP 859
PP G ++ G P P PP P P PP
Sbjct: 330 PPGGLPPISGGPPPPPPPPGGCPPPPPP 357
Score = 30.3 bits (65), Expect = 1.9
Identities = 14/30 (46%), Positives = 14/30 (46%), Gaps = 2/30 (6%)
Frame = +2
Query: 776 PPPGXXXLAXGXPXPLPPXXD--PPAPXPP 859
PPPG G P P PP PP P PP
Sbjct: 329 PPPGGLPPISGGPPPPPPPPGGCPPPPPPP 358
>Z81103-7|CAB03211.3| 579|Caenorhabditis elegans Hypothetical
protein M04G12.4a protein.
Length = 579
Score = 29.5 bits (63), Expect = 3.3
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = +3
Query: 177 QPTVGNGYEPIDNRPYIVNPPKDYNPNGNGYEP 275
QP VGN Y+P P +PP Y GY P
Sbjct: 91 QPLVGNSYDP----PVRFDPPYAYRATATGYMP 119
>Z81103-5|CAD56592.2| 550|Caenorhabditis elegans Hypothetical
protein M04G12.4b protein.
Length = 550
Score = 29.5 bits (63), Expect = 3.3
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = +3
Query: 177 QPTVGNGYEPIDNRPYIVNPPKDYNPNGNGYEP 275
QP VGN Y+P P +PP Y GY P
Sbjct: 62 QPLVGNSYDP----PVRFDPPYAYRATATGYMP 90
>Z81088-12|CAD56587.2| 579|Caenorhabditis elegans Hypothetical
protein M04G12.4a protein.
Length = 579
Score = 29.5 bits (63), Expect = 3.3
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = +3
Query: 177 QPTVGNGYEPIDNRPYIVNPPKDYNPNGNGYEP 275
QP VGN Y+P P +PP Y GY P
Sbjct: 91 QPLVGNSYDP----PVRFDPPYAYRATATGYMP 119
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 29.5 bits (63), Expect = 3.3
Identities = 17/54 (31%), Positives = 18/54 (33%)
Frame = -1
Query: 858 GGXGAGGSXXGGXGXGXPXAXXXXPGGGRXXXSRXNXPNXGPRXRGXEKEAXGG 697
GG G GG GG G G GGG S + G G GG
Sbjct: 50 GGSGFGGGNTGGSGFGGGKTGGSGFGGGNTCGSGFGGGSTGGSPYGGASSGFGG 103
>AF326941-1|AAG49391.1| 139|Caenorhabditis elegans 5H1 protein.
Length = 139
Score = 29.5 bits (63), Expect = 3.3
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = -1
Query: 858 GGXGAGGSXXGGXGXGXPXAXXXXPGGG 775
GG G GG GG G G P GGG
Sbjct: 46 GGPGIGGPGLGGPGIGGPGLGGPGVGGG 73
>AF125955-7|AAD14713.1| 139|Caenorhabditis elegans Hypothetical
protein F46E10.2 protein.
Length = 139
Score = 29.5 bits (63), Expect = 3.3
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = -1
Query: 858 GGXGAGGSXXGGXGXGXPXAXXXXPGGG 775
GG G GG GG G G P GGG
Sbjct: 46 GGPGIGGPGLGGPGIGGPGLGGPGVGGG 73
>AF067612-1|AAD36954.1| 780|Caenorhabditis elegans Egg laying
defective protein 4,isoform a protein.
Length = 780
Score = 29.5 bits (63), Expect = 3.3
Identities = 16/42 (38%), Positives = 18/42 (42%)
Frame = -1
Query: 858 GGXGAGGSXXGGXGXGXPXAXXXXPGGGRXXXSRXNXPNXGP 733
GG G GG GG G G P GG R S+ P+ P
Sbjct: 10 GGGGGGGGASGGAGGGAPGGGG---GGIRGFFSKLRKPSDQP 48
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 29.5 bits (63), Expect = 3.3
Identities = 17/54 (31%), Positives = 18/54 (33%)
Frame = -1
Query: 858 GGXGAGGSXXGGXGXGXPXAXXXXPGGGRXXXSRXNXPNXGPRXRGXEKEAXGG 697
GG G GG GG G G GGG S + G G GG
Sbjct: 50 GGSGFGGGNTGGSGFGGGKTGGSGFGGGNTCGSGFGGGSTGGSPYGGASSGFGG 103
>Z68006-7|CAA91995.2| 783|Caenorhabditis elegans Hypothetical
protein K09C8.1 protein.
Length = 783
Score = 29.1 bits (62), Expect = 4.4
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = -2
Query: 173 KEWIGVIDHNLSVGHSQQSEDENHEEFHFYMITSYH 66
+E+I V+ H S HS + H+E H + S+H
Sbjct: 65 EEFIKVLKHRQSKDHSGEHVGNEHDESHGISVVSWH 100
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 29.1 bits (62), Expect = 4.4
Identities = 14/41 (34%), Positives = 15/41 (36%)
Frame = -1
Query: 858 GGXGAGGSXXGGXGXGXPXAXXXXPGGGRXXXSRXNXPNXG 736
GG G GG GG G G P + GG R G
Sbjct: 132 GGGGRGGGGRGGDGRGPPGSNGGGDWGGNGGGGRGGGGGRG 172
>AF497831-1|AAM18109.1| 783|Caenorhabditis elegans putative Na-H
exchanger isoform 7 protein.
Length = 783
Score = 29.1 bits (62), Expect = 4.4
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = -2
Query: 173 KEWIGVIDHNLSVGHSQQSEDENHEEFHFYMITSYH 66
+E+I V+ H S HS + H+E H + S+H
Sbjct: 65 EEFIKVLKHRQSKDHSGEHVGNEHDESHGISVVSWH 100
>Z68753-3|CAA92988.3| 984|Caenorhabditis elegans Hypothetical
protein ZC518.2 protein.
Length = 984
Score = 28.3 bits (60), Expect = 7.6
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +2
Query: 779 PPGXXXLAXGXPXPLPPXXDPPAPXP 856
PP LA P P P PPAP P
Sbjct: 150 PPIPSALASARPAPFPAAQPPPAPTP 175
>U21319-7|AAL16307.1| 469|Caenorhabditis elegans Hypothetical
protein C30G12.1 protein.
Length = 469
Score = 28.3 bits (60), Expect = 7.6
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +1
Query: 244 TTTLMETATNLSTTVHITWTVPKADLTSSLPLS 342
TTT M T T ST + T T P+ ++P S
Sbjct: 294 TTTTMTTTTRTSTAIPTTTTTPRQISLQTIPFS 326
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 28.3 bits (60), Expect = 7.6
Identities = 11/28 (39%), Positives = 12/28 (42%)
Frame = +2
Query: 776 PPPGXXXLAXGXPXPLPPXXDPPAPXPP 859
PPP P +PP PP P PP
Sbjct: 496 PPPPPPLPPIATPSSVPPPPPPPPPPPP 523
>L25598-2|AAV58887.1| 780|Caenorhabditis elegans Calpain family
protein 1, isoform a protein.
Length = 780
Score = 28.3 bits (60), Expect = 7.6
Identities = 19/64 (29%), Positives = 22/64 (34%)
Frame = -1
Query: 858 GGXGAGGSXXGGXGXGXPXAXXXXPGGGRXXXSRXNXPNXGPRXRGXEKEAXGGVXXXVA 679
GG G GG GG G GG N + R R K+ GG+ V
Sbjct: 57 GGGGGGGGGFGGGNGGFGGGSNYDQGG------NGNSGDQQKRKRDMAKDLIGGIFDNVV 110
Query: 678 XXKG 667
KG
Sbjct: 111 NRKG 114
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,169,593
Number of Sequences: 27780
Number of extensions: 321814
Number of successful extensions: 1703
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 903
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1533
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2202903780
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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