Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP15_F_A18
         (910 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.      24   1.7  
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    23   5.1  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    23   5.1  

>AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.
          Length = 366

 Score = 24.2 bits (50), Expect = 1.7
 Identities = 19/55 (34%), Positives = 20/55 (36%)
 Frame = +3

Query: 582 WRNPTGL*RYQAFPPGSSLVRSPGSXPGRLPDTCPXFLPFGKRGAFS*LTL*VSP 746
           + NP    RYQ  P G  L         RL D  P FL    R     L L  SP
Sbjct: 91  YENPDEEKRYQEHPNGKILRELQTDYDRRLHDNSPSFLSDHSRDQEQNLYLTPSP 145


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 22.6 bits (46), Expect = 5.1
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +3

Query: 774 WAVCXNPPFNPTAAP 818
           W V  +PP++P  AP
Sbjct: 264 WDVLPHPPYSPDLAP 278


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 22.6 bits (46), Expect = 5.1
 Identities = 9/29 (31%), Positives = 11/29 (37%)
 Frame = -2

Query: 564 DFCDARSGGRSLWKNASNAAFLRFLAFCW 478
           D C   SGG  LW+N      +      W
Sbjct: 343 DACQMDSGGPVLWQNPRTKRLVNIGIISW 371


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 237,955
Number of Sequences: 438
Number of extensions: 6025
Number of successful extensions: 8
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29509116
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)