Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP15_F_A08
(889 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y00281-1|CAA68392.1| 607|Homo sapiens protein ( Human mRNA for ... 116 9e-26
CR456742-1|CAG33023.1| 607|Homo sapiens RPN1 protein. 116 9e-26
BC010839-1|AAH10839.1| 607|Homo sapiens ribophorin I protein. 116 9e-26
AK223595-1|BAD97315.1| 607|Homo sapiens ribophorin I variant pr... 114 4e-25
BC007995-1|AAH07995.1| 568|Homo sapiens Similar to ribophorin I... 110 6e-24
X95486-1|CAA64752.1| 1640|Homo sapiens clathrin heavy chain poly... 30 9.8
U60803-1|AAB40909.1| 1569|Homo sapiens clathrin heavy chain 2 pr... 30 9.8
U60802-1|AAB40908.1| 1626|Homo sapiens clathrin heavy chain 2 pr... 30 9.8
U41763-1|AAC50494.1| 1640|Homo sapiens muscle clathrin heavy cha... 30 9.8
>Y00281-1|CAA68392.1| 607|Homo sapiens protein ( Human mRNA for
ribophorin I. ).
Length = 607
Score = 116 bits (280), Expect = 9e-26
Identities = 66/154 (42%), Positives = 93/154 (60%), Gaps = 7/154 (4%)
Frame = +2
Query: 182 KNVDRTVDISTQLVKVVSKIVLENSGKSSVKH---FLFAVEEAAKNNLAFIGAK----DS 340
++V RTVD+S+ L KV +++VL + G S FL A+E + LA +G + D
Sbjct: 34 EDVKRTVDLSSHLAKVTAEVVLAHLGGGSTSRATSFLLALEPELEARLAHLGVQVKGEDE 93
Query: 341 NSKDLRLAETTVKGYDYVKFWRVELKEPLNAGATVNVVVETVFTKALQPYPTAITQQEDQ 520
+L + ET +KG +F+ V+L L+ GA ++V+VETV+T L PYPT ITQ E Q
Sbjct: 94 EENNLEVRETKIKGKSG-RFFTVKLPVALDPGAKISVIVETVYTHVLHPYPTQITQSEKQ 152
Query: 521 FVKYVGNLYTYSPYYTSTQKTSVILNTKTVESFT 622
FV + GN Y YSPY T TQ V L ++ VES+T
Sbjct: 153 FVVFEGNHYFYSPYPTKTQTMRVKLASRNVESYT 186
Score = 66.1 bits (154), Expect = 2e-10
Identities = 28/62 (45%), Positives = 38/62 (61%)
Frame = +3
Query: 663 YGPYANVGPFTEKELSIHYKNNSPFLTVTRVERLIXVSHWGXXXXXXXXXXXHTGAKLKV 842
YGP+ +V +++ +HY+NNSPFLT+T + R+I VSHWG HTGA LK
Sbjct: 200 YGPFRDVPAYSQDTFKVHYENNSPFLTITSMTRVIEVSHWGNIAVEENVDLKHTGAVLKG 259
Query: 843 RF 848
F
Sbjct: 260 PF 261
>CR456742-1|CAG33023.1| 607|Homo sapiens RPN1 protein.
Length = 607
Score = 116 bits (280), Expect = 9e-26
Identities = 66/154 (42%), Positives = 93/154 (60%), Gaps = 7/154 (4%)
Frame = +2
Query: 182 KNVDRTVDISTQLVKVVSKIVLENSGKSSVKH---FLFAVEEAAKNNLAFIGAK----DS 340
++V RTVD+S+ L KV +++VL + G S FL A+E + LA +G + D
Sbjct: 34 EDVKRTVDLSSHLAKVTAEVVLAHLGGGSTSRATSFLLALEPELEARLAHLGVQVKGEDE 93
Query: 341 NSKDLRLAETTVKGYDYVKFWRVELKEPLNAGATVNVVVETVFTKALQPYPTAITQQEDQ 520
+L + ET +KG +F+ V+L L+ GA ++V+VETV+T L PYPT ITQ E Q
Sbjct: 94 EENNLEVRETKIKGKSG-RFFTVKLPVALDPGAKISVIVETVYTHVLHPYPTQITQSEKQ 152
Query: 521 FVKYVGNLYTYSPYYTSTQKTSVILNTKTVESFT 622
FV + GN Y YSPY T TQ V L ++ VES+T
Sbjct: 153 FVVFEGNHYFYSPYPTKTQTMRVKLASRNVESYT 186
Score = 66.1 bits (154), Expect = 2e-10
Identities = 28/62 (45%), Positives = 38/62 (61%)
Frame = +3
Query: 663 YGPYANVGPFTEKELSIHYKNNSPFLTVTRVERLIXVSHWGXXXXXXXXXXXHTGAKLKV 842
YGP+ +V +++ +HY+NNSPFLT+T + R+I VSHWG HTGA LK
Sbjct: 200 YGPFRDVPAYSQDTFKVHYENNSPFLTITSMTRVIEVSHWGNIAVEENVDLKHTGAVLKG 259
Query: 843 RF 848
F
Sbjct: 260 PF 261
>BC010839-1|AAH10839.1| 607|Homo sapiens ribophorin I protein.
Length = 607
Score = 116 bits (280), Expect = 9e-26
Identities = 66/154 (42%), Positives = 93/154 (60%), Gaps = 7/154 (4%)
Frame = +2
Query: 182 KNVDRTVDISTQLVKVVSKIVLENSGKSSVKH---FLFAVEEAAKNNLAFIGAK----DS 340
++V RTVD+S+ L KV +++VL + G S FL A+E + LA +G + D
Sbjct: 34 EDVKRTVDLSSHLAKVTAEVVLAHLGGGSTSRATSFLLALEPELEARLAHLGVQVKGEDE 93
Query: 341 NSKDLRLAETTVKGYDYVKFWRVELKEPLNAGATVNVVVETVFTKALQPYPTAITQQEDQ 520
+L + ET +KG +F+ V+L L+ GA ++V+VETV+T L PYPT ITQ E Q
Sbjct: 94 EENNLEVRETKIKGKSG-RFFTVKLPVALDPGAKISVIVETVYTHVLHPYPTQITQSEKQ 152
Query: 521 FVKYVGNLYTYSPYYTSTQKTSVILNTKTVESFT 622
FV + GN Y YSPY T TQ V L ++ VES+T
Sbjct: 153 FVVFEGNHYFYSPYPTKTQTMRVKLASRNVESYT 186
Score = 66.1 bits (154), Expect = 2e-10
Identities = 28/62 (45%), Positives = 38/62 (61%)
Frame = +3
Query: 663 YGPYANVGPFTEKELSIHYKNNSPFLTVTRVERLIXVSHWGXXXXXXXXXXXHTGAKLKV 842
YGP+ +V +++ +HY+NNSPFLT+T + R+I VSHWG HTGA LK
Sbjct: 200 YGPFRDVPAYSQDTFKVHYENNSPFLTITSMTRVIEVSHWGNIAVEENVDLKHTGAVLKG 259
Query: 843 RF 848
F
Sbjct: 260 PF 261
>AK223595-1|BAD97315.1| 607|Homo sapiens ribophorin I variant
protein.
Length = 607
Score = 114 bits (275), Expect = 4e-25
Identities = 65/154 (42%), Positives = 92/154 (59%), Gaps = 7/154 (4%)
Frame = +2
Query: 182 KNVDRTVDISTQLVKVVSKIVLENSGKSSVKH---FLFAVEEAAKNNLAFIGAK----DS 340
++V RTVD+S+ L KV +++VL + G S FL A+E + LA +G + D
Sbjct: 34 EDVKRTVDLSSHLAKVTAEVVLAHLGGGSTSRATSFLLALEPELEARLAHLGVQVKGEDE 93
Query: 341 NSKDLRLAETTVKGYDYVKFWRVELKEPLNAGATVNVVVETVFTKALQPYPTAITQQEDQ 520
+L + ET +KG +F+ V+L L+ GA ++V+VETV+T L PYPT ITQ E Q
Sbjct: 94 EENNLEVRETKIKGKSG-RFFTVKLPVALDPGAKISVIVETVYTHVLHPYPTQITQSEKQ 152
Query: 521 FVKYVGNLYTYSPYYTSTQKTSVILNTKTVESFT 622
FV + GN Y Y PY T TQ V L ++ VES+T
Sbjct: 153 FVVFEGNHYFYPPYPTKTQTMRVKLASRNVESYT 186
Score = 66.1 bits (154), Expect = 2e-10
Identities = 28/62 (45%), Positives = 38/62 (61%)
Frame = +3
Query: 663 YGPYANVGPFTEKELSIHYKNNSPFLTVTRVERLIXVSHWGXXXXXXXXXXXHTGAKLKV 842
YGP+ +V +++ +HY+NNSPFLT+T + R+I VSHWG HTGA LK
Sbjct: 200 YGPFRDVPAYSQDTFKVHYENNSPFLTITSMTRVIEVSHWGNIAVEENVDLKHTGAVLKG 259
Query: 843 RF 848
F
Sbjct: 260 PF 261
>BC007995-1|AAH07995.1| 568|Homo sapiens Similar to ribophorin I
protein.
Length = 568
Score = 110 bits (265), Expect = 6e-24
Identities = 63/148 (42%), Positives = 88/148 (59%), Gaps = 7/148 (4%)
Frame = +2
Query: 200 VDISTQLVKVVSKIVLENSGKSSVKH---FLFAVEEAAKNNLAFIGAK----DSNSKDLR 358
VD+S+ L KV +++VL + G S FL A+E + LA +G + D +L
Sbjct: 1 VDLSSHLAKVTAEVVLAHLGGGSTSRATSFLLALEPELEARLAHLGVQVKGEDEEENNLE 60
Query: 359 LAETTVKGYDYVKFWRVELKEPLNAGATVNVVVETVFTKALQPYPTAITQQEDQFVKYVG 538
+ ET +KG +F+ V+L L+ GA ++V+VETV+T L PYPT ITQ E QFV + G
Sbjct: 61 VRETKIKGKSG-RFFTVKLPVALDPGAKISVIVETVYTHVLHPYPTQITQSEKQFVVFEG 119
Query: 539 NLYTYSPYYTSTQKTSVILNTKTVESFT 622
N Y YSPY T TQ V L ++ VES+T
Sbjct: 120 NHYFYSPYPTKTQTMRVKLASRNVESYT 147
Score = 66.1 bits (154), Expect = 2e-10
Identities = 28/62 (45%), Positives = 38/62 (61%)
Frame = +3
Query: 663 YGPYANVGPFTEKELSIHYKNNSPFLTVTRVERLIXVSHWGXXXXXXXXXXXHTGAKLKV 842
YGP+ +V +++ +HY+NNSPFLT+T + R+I VSHWG HTGA LK
Sbjct: 161 YGPFRDVPAYSQDTFKVHYENNSPFLTITSMTRVIEVSHWGNIAVEENVDLKHTGAVLKG 220
Query: 843 RF 848
F
Sbjct: 221 PF 222
>X95486-1|CAA64752.1| 1640|Homo sapiens clathrin heavy chain
polypeptide protein.
Length = 1640
Score = 30.3 bits (65), Expect = 9.8
Identities = 26/95 (27%), Positives = 47/95 (49%), Gaps = 5/95 (5%)
Frame = +2
Query: 197 TVDISTQLVKVVSKIVLENSGKSSVKH-----FLFAVEEAAKNNLAFIGAKDSNSKDLRL 361
T D+ +L++++ KIVL+NS S ++ L A++ + +I D N L +
Sbjct: 997 TADLPNELIELLEKIVLDNSVFSEHRNLQNLLILTAIKADRTRVMEYISRLD-NYDALDI 1055
Query: 362 AETTVKGYDYVKFWRVELKEPLNAGATVNVVVETV 466
A V Y + + V K +NA A + V++E +
Sbjct: 1056 ASIAVSSALYEEAFTVFHKFDMNASA-IQVLIEHI 1089
>U60803-1|AAB40909.1| 1569|Homo sapiens clathrin heavy chain 2
protein.
Length = 1569
Score = 30.3 bits (65), Expect = 9.8
Identities = 26/95 (27%), Positives = 47/95 (49%), Gaps = 5/95 (5%)
Frame = +2
Query: 197 TVDISTQLVKVVSKIVLENSGKSSVKH-----FLFAVEEAAKNNLAFIGAKDSNSKDLRL 361
T D+ +L++++ KIVL+NS S ++ L A++ + +I D N L +
Sbjct: 997 TADLPNELIELLEKIVLDNSVFSEHRNLQNLLILTAIKADRTRVMEYISRLD-NYDALDI 1055
Query: 362 AETTVKGYDYVKFWRVELKEPLNAGATVNVVVETV 466
A V Y + + V K +NA A + V++E +
Sbjct: 1056 ASIAVSSALYEEAFTVFHKFDMNASA-IQVLIEHI 1089
>U60802-1|AAB40908.1| 1626|Homo sapiens clathrin heavy chain 2
protein.
Length = 1626
Score = 30.3 bits (65), Expect = 9.8
Identities = 26/95 (27%), Positives = 47/95 (49%), Gaps = 5/95 (5%)
Frame = +2
Query: 197 TVDISTQLVKVVSKIVLENSGKSSVKH-----FLFAVEEAAKNNLAFIGAKDSNSKDLRL 361
T D+ +L++++ KIVL+NS S ++ L A++ + +I D N L +
Sbjct: 997 TADLPNELIELLEKIVLDNSVFSEHRNLQNLLILTAIKADRTRVMEYISRLD-NYDALDI 1055
Query: 362 AETTVKGYDYVKFWRVELKEPLNAGATVNVVVETV 466
A V Y + + V K +NA A + V++E +
Sbjct: 1056 ASIAVSSALYEEAFTVFHKFDMNASA-IQVLIEHI 1089
>U41763-1|AAC50494.1| 1640|Homo sapiens muscle clathrin heavy chain
protein.
Length = 1640
Score = 30.3 bits (65), Expect = 9.8
Identities = 26/95 (27%), Positives = 47/95 (49%), Gaps = 5/95 (5%)
Frame = +2
Query: 197 TVDISTQLVKVVSKIVLENSGKSSVKH-----FLFAVEEAAKNNLAFIGAKDSNSKDLRL 361
T D+ +L++++ KIVL+NS S ++ L A++ + +I D N L +
Sbjct: 997 TADLPNELIELLEKIVLDNSVFSEHRNLQNLLILTAIKADRTRVMEYISRLD-NYDALDI 1055
Query: 362 AETTVKGYDYVKFWRVELKEPLNAGATVNVVVETV 466
A V Y + + V K +NA A + V++E +
Sbjct: 1056 ASIAVSSALYEEAFTVFHKFDMNASA-IQVLIEHI 1089
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,632,136
Number of Sequences: 237096
Number of extensions: 2281078
Number of successful extensions: 4225
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3835
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4192
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11381686510
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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