Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP15_F_A08
         (889 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF039052-5|AAF98626.2|  586|Caenorhabditis elegans Hypothetical ...    78   7e-15
Z78543-1|CAB01753.2| 1170|Caenorhabditis elegans Hypothetical pr...    31   1.5  
U41532-8|AAK68318.1|  331|Caenorhabditis elegans Hypothetical pr...    30   2.5  
U41532-7|ABD63237.1|  769|Caenorhabditis elegans Hypothetical pr...    30   2.5  
U41532-6|AAF99908.2|  812|Caenorhabditis elegans Hypothetical pr...    30   2.5  
AF039710-10|AAB96693.2|  393|Caenorhabditis elegans Hypothetical...    29   4.4  
U41546-6|AAC48223.1|  798|Caenorhabditis elegans Hypothetical pr...    29   5.9  
AF067216-10|AAC17519.1|  492|Caenorhabditis elegans Hypothetical...    29   5.9  

>AF039052-5|AAF98626.2|  586|Caenorhabditis elegans Hypothetical
           protein T22D1.4 protein.
          Length = 586

 Score = 78.2 bits (184), Expect = 7e-15
 Identities = 47/139 (33%), Positives = 73/139 (52%), Gaps = 1/139 (0%)
 Frame = +2

Query: 176 KLKNVDRTVDISTQLVKVVSKIVLENSGKSSVKHFLFAVEEAAKNNLAFIGAKDSNSKD- 352
           K  NVDRT+D ++Q+VKV +    EN G       L A+ +     L+FI A    SK  
Sbjct: 20  KAANVDRTIDATSQIVKVSTLYSFENVGNGPQSKVLIALSKEESATLSFISAGIDGSKGK 79

Query: 353 LRLAETTVKGYDYVKFWRVELKEPLNAGATVNVVVETVFTKALQPYPTAITQQEDQFVKY 532
           L+++E   +    +  + V+L+ P+  GA V + +    T+ L+P P+ I Q + QFV  
Sbjct: 80  LKISEKPAE--KDLAVYEVDLRTPVAKGAKVTIRINLRITQVLEPLPSKIQQSDSQFVVL 137

Query: 533 VGNLYTYSPYYTSTQKTSV 589
             + Y  S Y T TQKT++
Sbjct: 138 HTSAYVPSLYETVTQKTTI 156



 Score = 71.7 bits (168), Expect = 6e-13
 Identities = 32/70 (45%), Positives = 39/70 (55%)
 Frame = +3

Query: 627 VKPFSQVDGTIIYGPYANVGPFTEKELSIHYKNNSPFLTVTRVERLIXVSHWGXXXXXXX 806
           V P  Q    +IYGPY N+  F  K + +HY+NNSPF+  T VER I VSHWG       
Sbjct: 170 VSPSKQETERVIYGPYVNIPAFETKPVKVHYENNSPFVIATIVERFIEVSHWGNIAVEEY 229

Query: 807 XXXXHTGAKL 836
               H GA+L
Sbjct: 230 IELVHKGAEL 239


>Z78543-1|CAB01753.2| 1170|Caenorhabditis elegans Hypothetical
           protein F29G6.1 protein.
          Length = 1170

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = +1

Query: 433 RCHSKCCCRNCVHQSFTTISDSYNSARRPVC 525
           RC SK C  NC +  F  + D+  S  R +C
Sbjct: 109 RCSSKDCNHNCTNTEFDPVCDTNGSVYRNLC 139


>U41532-8|AAK68318.1|  331|Caenorhabditis elegans Hypothetical
           protein F11D5.1b protein.
          Length = 331

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 14/22 (63%), Positives = 16/22 (72%)
 Frame = +2

Query: 548 TYSPYYTSTQKTSVILNTKTVE 613
           TYSP YTST   SV L++K VE
Sbjct: 53  TYSPSYTSTSLNSVSLSSKYVE 74


>U41532-7|ABD63237.1|  769|Caenorhabditis elegans Hypothetical
           protein F11D5.1c protein.
          Length = 769

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 14/22 (63%), Positives = 16/22 (72%)
 Frame = +2

Query: 548 TYSPYYTSTQKTSVILNTKTVE 613
           TYSP YTST   SV L++K VE
Sbjct: 491 TYSPSYTSTSLNSVSLSSKYVE 512


>U41532-6|AAF99908.2|  812|Caenorhabditis elegans Hypothetical
           protein F11D5.1a protein.
          Length = 812

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 14/22 (63%), Positives = 16/22 (72%)
 Frame = +2

Query: 548 TYSPYYTSTQKTSVILNTKTVE 613
           TYSP YTST   SV L++K VE
Sbjct: 534 TYSPSYTSTSLNSVSLSSKYVE 555


>AF039710-10|AAB96693.2|  393|Caenorhabditis elegans Hypothetical
           protein C46E10.9 protein.
          Length = 393

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 20/65 (30%), Positives = 28/65 (43%)
 Frame = +1

Query: 469 HQSFTTISDSYNSARRPVCEICWQFVYILPVLYLHTKNQRNSKYKDC*IIYQX*SLSHKL 648
           HQ+ T  +      R+  CEIC +     P L  H K    +K K C I  Q     ++L
Sbjct: 194 HQTLTGSNGVRPVNRQFKCEICEKQFANKPNLNRHRKIHSGTKSKKCNICQQTLHRENRL 253

Query: 649 MEQLF 663
            E L+
Sbjct: 254 QEHLY 258


>U41546-6|AAC48223.1|  798|Caenorhabditis elegans Hypothetical
           protein T25B6.2 protein.
          Length = 798

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 14/40 (35%), Positives = 23/40 (57%)
 Frame = +2

Query: 200 VDISTQLVKVVSKIVLENSGKSSVKHFLFAVEEAAKNNLA 319
           VD+ +++V  +SKI + ++  S  +    A  E  KNNLA
Sbjct: 119 VDVYSEIVAALSKIDVTSTTTSKTERITKAAFETCKNNLA 158


>AF067216-10|AAC17519.1|  492|Caenorhabditis elegans Hypothetical
           protein C35E7.3 protein.
          Length = 492

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = -3

Query: 767 YQSFDASNSQKW*IVFVVNAELLFSERPNISVRSI 663
           +QSFD+ N +KW   F++N   L  ++ NIS   I
Sbjct: 409 FQSFDSKNEEKW---FLLNYSNLCEKKNNISAMII 440


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,609,936
Number of Sequences: 27780
Number of extensions: 395162
Number of successful extensions: 1005
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 982
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1004
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2244863852
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)