Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP15_F_A07
         (1307 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

J05070-1|AAA51539.1|  707|Homo sapiens CLG4A protein.                  32   5.3  
DQ194553-1|ABA03169.1|  707|Homo sapiens matrix metallopeptidase...    32   5.3  
BC006093-1|AAH06093.1|  707|Homo sapiens matrix metallopeptidase...    32   5.3  
AL162458-5|CAC10459.1|  707|Homo sapiens matrix metallopeptidase...    32   5.3  
AF538844-1|AAM97934.1|  707|Homo sapiens matrix metalloproteinas...    32   5.3  

>J05070-1|AAA51539.1|  707|Homo sapiens CLG4A protein.
          Length = 707

 Score = 31.9 bits (69), Expect = 5.3
 Identities = 17/47 (36%), Positives = 18/47 (38%)
 Frame = +2

Query: 410 PPNTTXPXXPTHPPXXXPPNPTXIHTPXRTPXXHXXXXKATSTXSPT 550
           PP TT P  PT PP   P  P  +H   R          A  T  PT
Sbjct: 453 PPTTTTPQ-PTAPPTVCPTGPPTVHPSERPTAGPTGPPSAGPTGPPT 498


>DQ194553-1|ABA03169.1|  707|Homo sapiens matrix metallopeptidase 9
           (gelatinase B, 92kDa gelatinase, 92kDa type IV collag
           protein.
          Length = 707

 Score = 31.9 bits (69), Expect = 5.3
 Identities = 17/47 (36%), Positives = 18/47 (38%)
 Frame = +2

Query: 410 PPNTTXPXXPTHPPXXXPPNPTXIHTPXRTPXXHXXXXKATSTXSPT 550
           PP TT P  PT PP   P  P  +H   R          A  T  PT
Sbjct: 453 PPTTTTPQ-PTAPPTVCPTGPPTVHPSERPTAGPTGPPSAGPTGPPT 498


>BC006093-1|AAH06093.1|  707|Homo sapiens matrix metallopeptidase 9
           (gelatinase B, 92kDa gelatinase, 92kDa type IV collag
           protein.
          Length = 707

 Score = 31.9 bits (69), Expect = 5.3
 Identities = 17/47 (36%), Positives = 18/47 (38%)
 Frame = +2

Query: 410 PPNTTXPXXPTHPPXXXPPNPTXIHTPXRTPXXHXXXXKATSTXSPT 550
           PP TT P  PT PP   P  P  +H   R          A  T  PT
Sbjct: 453 PPTTTTPQ-PTAPPTVCPTGPPTVHPSERPTAGPTGPPSAGPTGPPT 498


>AL162458-5|CAC10459.1|  707|Homo sapiens matrix metallopeptidase 9
           (gelatinase B, 92kDa gelatinase, 92kDa type IV collag
           protein.
          Length = 707

 Score = 31.9 bits (69), Expect = 5.3
 Identities = 17/47 (36%), Positives = 18/47 (38%)
 Frame = +2

Query: 410 PPNTTXPXXPTHPPXXXPPNPTXIHTPXRTPXXHXXXXKATSTXSPT 550
           PP TT P  PT PP   P  P  +H   R          A  T  PT
Sbjct: 453 PPTTTTPQ-PTAPPTVCPTGPPTVHPSERPTAGPTGPPSAGPTGPPT 498


>AF538844-1|AAM97934.1|  707|Homo sapiens matrix metalloproteinase 9
           (gelatinase B, 92kD gelatinase, 92kD type IV collage
           protein.
          Length = 707

 Score = 31.9 bits (69), Expect = 5.3
 Identities = 17/47 (36%), Positives = 18/47 (38%)
 Frame = +2

Query: 410 PPNTTXPXXPTHPPXXXPPNPTXIHTPXRTPXXHXXXXKATSTXSPT 550
           PP TT P  PT PP   P  P  +H   R          A  T  PT
Sbjct: 453 PPTTTTPQ-PTAPPTVCPTGPPTVHPSERPTAGPTGPPSAGPTGPPT 498


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,841,136
Number of Sequences: 237096
Number of extensions: 320193
Number of successful extensions: 3522
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1851
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3118
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 18880856890
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)