Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP15_F_A01
(887 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC806.07 |ndk1||nucleoside diphosphate kinase|Schizosaccharomy... 70 4e-13
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 40 4e-04
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 36 0.008
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 36 0.010
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 33 0.072
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 32 0.13
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 31 0.17
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 31 0.17
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 29 0.88
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 29 1.2
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 29 1.2
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 28 1.9
>SPAC806.07 |ndk1||nucleoside diphosphate kinase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 151
Score = 70.1 bits (164), Expect = 4e-13
Identities = 34/71 (47%), Positives = 47/71 (66%)
Frame = +1
Query: 130 ERTFIMVXPDGVQRGLVGTIIERXEKKGFKLVGLKFVWPSEELXQQHYSDLAYRPFFPGS 309
E+TFI V PD VQRGL+G II + E KG+KL LKF+ PS +L ++HY++ +PF+
Sbjct: 4 EQTFIAVKPDAVQRGLIGYIISKFELKGYKLRALKFLVPSRDLVEEHYAEHKGKPFY--- 60
Query: 310 TKVHXFXTCGP 342
K+ F GP
Sbjct: 61 EKLVGFMASGP 71
Score = 33.1 bits (72), Expect = 0.054
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = +2
Query: 308 LLKYMXSXPVVPMXXXGLNVVXTGRQLXGATNPAXS 415
L+ +M S PV M G V TGR + GA+NP S
Sbjct: 63 LVGFMASGPVCAMIWEGKQAVKTGRLMLGASNPLDS 98
Score = 26.6 bits (56), Expect = 4.7
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +3
Query: 453 NLGRNIIHGSXSXXSATXXIXL 518
+LGRN+ HGS S SA I L
Sbjct: 110 DLGRNVCHGSDSIESANREIKL 131
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 40.3 bits (90), Expect = 4e-04
Identities = 28/74 (37%), Positives = 28/74 (37%), Gaps = 1/74 (1%)
Frame = -1
Query: 887 GXGXXGXLAXGGXGGXGXXXGWXWGGXWXXGVXGSXXXGSXRRXGGGXXGAGGEXGKXXG 708
G G GG GG G G GG G G GGG G GG G G
Sbjct: 198 GGPPPGPGGFGGFGGFGGE-GHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGG 256
Query: 707 G-GGXXGXPXGGGG 669
G GG G P G GG
Sbjct: 257 GPGGFGGGPGGHGG 270
Score = 38.7 bits (86), Expect = 0.001
Identities = 26/65 (40%), Positives = 26/65 (40%), Gaps = 1/65 (1%)
Frame = -1
Query: 857 GGXGGXGXXXGWXWGGXWXXGVXGSXXXGSXRRXGGGXXGAGGEXGKXXGG-GGXXGXPX 681
GG GG G G G G G G GG G GG G GG GG G P
Sbjct: 188 GGFGGFGGGSGGPPPGP--GGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPG 245
Query: 680 GGGGG 666
G GGG
Sbjct: 246 GFGGG 250
Score = 37.1 bits (82), Expect = 0.003
Identities = 29/78 (37%), Positives = 31/78 (39%), Gaps = 4/78 (5%)
Frame = -1
Query: 887 GXGXXGXLAXG---GXGGXGXXXGWXWGGXWXXGVXGSXXXGSXRRXGGGXXGAGGEXGK 717
G G G + G G GG G G+ G G G G GG G GG G
Sbjct: 189 GFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGG--FGGGPGGFEGGPGGFGGGPGG 246
Query: 716 XXGG-GGXXGXPXGGGGG 666
GG GG G P G GGG
Sbjct: 247 FGGGLGGFGGGPGGFGGG 264
Score = 35.1 bits (77), Expect = 0.013
Identities = 25/69 (36%), Positives = 25/69 (36%), Gaps = 3/69 (4%)
Frame = -1
Query: 881 GXXGXLAXGGXGGXGXXXGWXWG-GXWXXGVXGSXXX--GSXRRXGGGXXGAGGEXGKXX 711
G G GG GG G G G G G G G GGG G GG G
Sbjct: 203 GPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFG 262
Query: 710 GGGGXXGXP 684
GG G G P
Sbjct: 263 GGPGGHGGP 271
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 35.9 bits (79), Expect = 0.008
Identities = 16/45 (35%), Positives = 17/45 (37%)
Frame = +3
Query: 747 PPPXPALTPXXXTSXHXXPPXPXPXPXXTXPXPPPPXXRQXSPPP 881
PPP PA+ P P P P PPPP PPP
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPP 777
Score = 34.7 bits (76), Expect = 0.018
Identities = 20/55 (36%), Positives = 21/55 (38%), Gaps = 1/55 (1%)
Frame = +3
Query: 720 PXLPPXPXXPPPXPALTPXXXTS-XHXXPPXPXPXPXXTXPXPPPPXXRQXSPPP 881
P PP P P PA P + PP P P P PPPP PPP
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPP----PPPPP 783
Score = 26.2 bits (55), Expect = 6.2
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = +1
Query: 667 PPPPPXGXPXXPPPP 711
PPPPP G PPP
Sbjct: 763 PPPPPPGVAGAGPPP 777
Score = 26.2 bits (55), Expect = 6.2
Identities = 11/19 (57%), Positives = 11/19 (57%), Gaps = 4/19 (21%)
Frame = +1
Query: 667 PPPPPX----GXPXXPPPP 711
PPPPP G P PPPP
Sbjct: 764 PPPPPGVAGAGPPPPPPPP 782
Score = 25.8 bits (54), Expect = 8.2
Identities = 14/38 (36%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Frame = +3
Query: 717 LPXLPPXPXX--PPPXPALTPXXXTSXHXXPPXPXPXP 824
+P PP P PPP P P + PP P P P
Sbjct: 749 IPVPPPAPIMGGPPPPP---PPPGVAGAGPPPPPPPPP 783
Score = 25.8 bits (54), Expect = 8.2
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = +1
Query: 667 PPPPPXGXPXXPPPP 711
PP P G P PPPP
Sbjct: 753 PPAPIMGGPPPPPPP 767
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 35.5 bits (78), Expect = 0.010
Identities = 23/64 (35%), Positives = 23/64 (35%)
Frame = -1
Query: 857 GGXGGXGXXXGWXWGGXWXXGVXGSXXXGSXRRXGGGXXGAGGEXGKXXGGGGXXGXPXG 678
GG GG G GG G G R GG G GG G G GG G G
Sbjct: 9 GGRGGSRGGRGGFNGGRGGFGGGRGGARGGGR--GGARGGRGGRGGARGGRGGSSGGRGG 66
Query: 677 GGGG 666
GG
Sbjct: 67 AKGG 70
Score = 31.1 bits (67), Expect = 0.22
Identities = 16/36 (44%), Positives = 16/36 (44%)
Frame = -1
Query: 773 GSXRRXGGGXXGAGGEXGKXXGGGGXXGXPXGGGGG 666
GS GG G GG G G GG G GGG G
Sbjct: 6 GSRGGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRG 41
Score = 29.1 bits (62), Expect = 0.88
Identities = 19/54 (35%), Positives = 19/54 (35%)
Frame = -2
Query: 880 GGGEXWRXXGGGGXGXVXXGXGXGXGGXXCXEVWXXGVSAGXGGGXXGXGGXXG 719
GG R GGG G G G GG G G GG G GG G
Sbjct: 19 GGFNGGRGGFGGGRGG---ARGGGRGGARGGRGGRGGARGGRGGSSGGRGGAKG 69
Score = 27.9 bits (59), Expect = 2.0
Identities = 17/54 (31%), Positives = 17/54 (31%)
Frame = -2
Query: 880 GGGEXWRXXGGGGXGXVXXGXGXGXGGXXCXEVWXXGVSAGXGGGXXGXGGXXG 719
GG R GG G G G GG G G GG G G G
Sbjct: 12 GGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRG 65
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 32.7 bits (71), Expect = 0.072
Identities = 16/52 (30%), Positives = 18/52 (34%)
Frame = +3
Query: 720 PXLPPXPXXPPPXPALTPXXXTSXHXXPPXPXPXPXXTXPXPPPPXXRQXSP 875
P + P PP A TP PP P P PPPP +P
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAP 1741
Score = 29.9 bits (64), Expect = 0.51
Identities = 16/48 (33%), Positives = 18/48 (37%)
Frame = +3
Query: 720 PXLPPXPXXPPPXPALTPXXXTSXHXXPPXPXPXPXXTXPXPPPPXXR 863
P PP P PP P+ P PP P P + P P P R
Sbjct: 1705 PTPPPPPMSVPPPPSAPPMPAGPPSAPPP---PLPASSAPSVPNPGDR 1749
Score = 28.7 bits (61), Expect = 1.2
Identities = 15/51 (29%), Positives = 17/51 (33%), Gaps = 3/51 (5%)
Frame = +3
Query: 738 PXXPPPXPALTPXXXTSXHXXPPXPXPXPXXTXP---XPPPPXXRQXSPPP 881
P P P + P P P P P P PP P +PPP
Sbjct: 1683 PAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPP 1733
Score = 26.6 bits (56), Expect = 4.7
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +1
Query: 670 PPPPXGXPXXPPPP 711
PP P G P PPPP
Sbjct: 1721 PPMPAGPPSAPPPP 1734
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 31.9 bits (69), Expect = 0.13
Identities = 15/40 (37%), Positives = 16/40 (40%)
Frame = +3
Query: 729 PPXPXXPPPXPALTPXXXTSXHXXPPXPXPXPXXTXPXPP 848
PP P PPP PA P + PP P P P P
Sbjct: 144 PPRPSIPPPSPASAPPIPSK---APPIPSSLPPPAQPAAP 180
Score = 30.3 bits (65), Expect = 0.38
Identities = 18/57 (31%), Positives = 22/57 (38%), Gaps = 6/57 (10%)
Frame = +3
Query: 729 PPXPXXPPPXPALTPXXXTSXHXXPPXPXPXPXXTXPXPP------PPXXRQXSPPP 881
PP P PP P+ P +S PP P + P P PP + PPP
Sbjct: 151 PPSPASAPPIPSKAPPIPSSL--PPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPP 205
Score = 29.5 bits (63), Expect = 0.67
Identities = 18/52 (34%), Positives = 18/52 (34%), Gaps = 2/52 (3%)
Frame = +3
Query: 729 PPXPXXPPPXPALTPXXXTSXHXXPPXPXPXPXXTXPXPP--PPXXRQXSPP 878
P P P P L P TS P P P P P P PP PP
Sbjct: 125 PSAPAPPTPQSELRPP--TSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPP 174
Score = 29.1 bits (62), Expect = 0.88
Identities = 15/47 (31%), Positives = 18/47 (38%)
Frame = +3
Query: 738 PXXPPPXPALTPXXXTSXHXXPPXPXPXPXXTXPXPPPPXXRQXSPP 878
P PP P++ P S P P P + P P P SPP
Sbjct: 140 PTSAPPRPSIPPPSPASAPPIPSKAPPIP-SSLPPPAQPAAPVKSPP 185
Score = 23.8 bits (49), Expect(2) = 3.9
Identities = 8/16 (50%), Positives = 8/16 (50%)
Frame = +3
Query: 801 PPXPXPXPXXTXPXPP 848
PP P P P P PP
Sbjct: 7 PPPPAPAPAAAAPAPP 22
Score = 21.4 bits (43), Expect(2) = 3.9
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = +3
Query: 726 LPPXPXXPPPXPA 764
+ P P PPP PA
Sbjct: 1 MAPAPPPPPPAPA 13
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 31.5 bits (68), Expect = 0.17
Identities = 17/54 (31%), Positives = 20/54 (37%), Gaps = 1/54 (1%)
Frame = +3
Query: 720 PXLPPXPXXPPPXP-ALTPXXXTSXHXXPPXPXPXPXXTXPXPPPPXXRQXSPP 878
P +P P PP P +L P S P P P PP P +PP
Sbjct: 415 PPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPP 468
Score = 29.5 bits (63), Expect = 0.67
Identities = 17/53 (32%), Positives = 19/53 (35%)
Frame = +3
Query: 720 PXLPPXPXXPPPXPALTPXXXTSXHXXPPXPXPXPXXTXPXPPPPXXRQXSPP 878
P PP PAL P S PP P P + P PP +PP
Sbjct: 388 PPAPPPAIPGRSAPALPPLGNASRTSTPPVPTP---PSLPPSAPPSLPPSAPP 437
Score = 28.7 bits (61), Expect = 1.2
Identities = 19/58 (32%), Positives = 21/58 (36%), Gaps = 4/58 (6%)
Frame = +3
Query: 720 PXLPPX--PXXPPPXPALTPXXXTSXHXXPP-XPXPXPXXT-XPXPPPPXXRQXSPPP 881
P LPP P PP P P + PP P P P PP +PPP
Sbjct: 421 PSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPP 478
Score = 28.3 bits (60), Expect = 1.5
Identities = 15/54 (27%), Positives = 17/54 (31%)
Frame = +3
Query: 720 PXLPPXPXXPPPXPALTPXXXTSXHXXPPXPXPXPXXTXPXPPPPXXRQXSPPP 881
P PP P ++ PP P P P PP R PPP
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPP 364
Score = 27.5 bits (58), Expect = 2.7
Identities = 17/54 (31%), Positives = 19/54 (35%), Gaps = 2/54 (3%)
Frame = +3
Query: 726 LPPXPXXPPPXPALTPXXXTSXHXXPPXPXPXPXXTXPXPPPP--XXRQXSPPP 881
LPP P P A + PP P P + PPP R S PP
Sbjct: 336 LPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPP 389
Score = 26.2 bits (55), Expect = 6.2
Identities = 15/52 (28%), Positives = 16/52 (30%)
Frame = +3
Query: 720 PXLPPXPXXPPPXPALTPXXXTSXHXXPPXPXPXPXXTXPXPPPPXXRQXSP 875
P LP PP P P P P P P PP P +P
Sbjct: 437 PSLPMGAPAAPPLPPSAPIAPPLPAGMPAAP-PLPPAAPAPPPAPAPAPAAP 487
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 31.5 bits (68), Expect = 0.17
Identities = 19/57 (33%), Positives = 20/57 (35%), Gaps = 3/57 (5%)
Frame = +3
Query: 720 PXLPPXPXXPP-PXPALTPXXXTSXHXXP--PXPXPXPXXTXPXPPPPXXRQXSPPP 881
P +P PP P P TP S P P P P P P P P P P
Sbjct: 1032 PPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAP 1088
Score = 27.5 bits (58), Expect = 2.7
Identities = 16/55 (29%), Positives = 22/55 (40%), Gaps = 1/55 (1%)
Frame = +3
Query: 717 LPXLPPXPXXPP-PXPALTPXXXTSXHXXPPXPXPXPXXTXPXPPPPXXRQXSPP 878
+P +PP PP P P++ PP P P + PP P +PP
Sbjct: 1188 VPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTP----SAGLPPVPVPTAKAPP 1238
Score = 27.1 bits (57), Expect = 3.6
Identities = 17/72 (23%), Positives = 20/72 (27%)
Frame = +1
Query: 667 PPPPPXGXPXXPPPPXXXXXXXXXXXXXXXXRRXLPXXXLPXTPXXHXPPQXXPXXXPXP 846
P P P G P P P + P +P P P P
Sbjct: 1151 PVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPK--PAAGVPPVPPPSEAPPVPKPSVGVP 1208
Query: 847 PXPPXAKXPXXP 882
P PP + P P
Sbjct: 1209 PVPPPSTAPPVP 1220
Score = 25.8 bits (54), Expect = 8.2
Identities = 18/56 (32%), Positives = 20/56 (35%), Gaps = 2/56 (3%)
Frame = +3
Query: 720 PXLP-PXPXXPP-PXPALTPXXXTSXHXXPPXPXPXPXXTXPXPPPPXXRQXSPPP 881
P +P P PP P P+ P PP P P P P P PPP
Sbjct: 1140 PPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAP-SSGIPPVPKPAAGVPPVPPP 1194
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 29.1 bits (62), Expect = 0.88
Identities = 19/64 (29%), Positives = 20/64 (31%)
Frame = +1
Query: 667 PPPPPXGXPXXPPPPXXXXXXXXXXXXXXXXRRXLPXXXLPXTPXXHXPPQXXPXXXPXP 846
PPPPP PPPP P P + P Q P P P
Sbjct: 189 PPPPP------PPPPAVEDQAADANEPDDYYSSGRAVS--PEIPPTYTPKQADPLPAPPP 240
Query: 847 PXPP 858
P PP
Sbjct: 241 PPPP 244
Score = 27.1 bits (57), Expect = 3.6
Identities = 15/50 (30%), Positives = 17/50 (34%), Gaps = 1/50 (2%)
Frame = +3
Query: 732 PXPXXPPPXPALTPXXXTSXHXXP-PXPXPXPXXTXPXPPPPXXRQXSPP 878
P P PPP P P T+ P P + PPP PP
Sbjct: 234 PLPAPPPPPPPTLPPQSTNTSQLPMPSRNVNNLGSQVNIPPPPATPSQPP 283
Score = 25.8 bits (54), Expect = 8.2
Identities = 11/31 (35%), Positives = 12/31 (38%)
Frame = +3
Query: 732 PXPXXPPPXPALTPXXXTSXHXXPPXPXPXP 824
P P PP A S + PP P P P
Sbjct: 167 PPPSFQPPSAAAPATSLPSDYNPPPPPPPPP 197
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 28.7 bits (61), Expect = 1.2
Identities = 13/29 (44%), Positives = 13/29 (44%), Gaps = 2/29 (6%)
Frame = +3
Query: 801 PPXPXPXPXXTXPXPPPPXXRQXSP--PP 881
PP P P P PPPP SP PP
Sbjct: 731 PPTPAPTPAVKHHPPPPPVRSSISPSMPP 759
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 28.7 bits (61), Expect = 1.2
Identities = 19/57 (33%), Positives = 19/57 (33%), Gaps = 2/57 (3%)
Frame = -1
Query: 854 GXGGXGXXXGWXWGGXWXXGVXGSXXXGSXRRXGGGXXGAGGEXGKXXGG--GGXXG 690
G GG G G G G G R G G GG G GG GG G
Sbjct: 136 GRGGRGGFRGGRGGSRGGFGGNSRGGFGGGSRGGFGGGSRGGSRGGFRGGSRGGFRG 192
Score = 26.2 bits (55), Expect = 6.2
Identities = 15/44 (34%), Positives = 16/44 (36%)
Frame = -1
Query: 797 GVXGSXXXGSXRRXGGGXXGAGGEXGKXXGGGGXXGXPXGGGGG 666
G G G R GG G G + GGG G GG G
Sbjct: 133 GPAGRGGRGGFRGGRGGSRGGFGGNSRGGFGGGSRGGFGGGSRG 176
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 27.9 bits (59), Expect = 2.0
Identities = 11/17 (64%), Positives = 11/17 (64%), Gaps = 2/17 (11%)
Frame = +1
Query: 667 PPPPPXG--XPXXPPPP 711
PPPPP G P PPPP
Sbjct: 11 PPPPPPGFEPPSQPPPP 27
Score = 26.2 bits (55), Expect = 6.2
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +3
Query: 801 PPXPXPXPXXTXPXPPPPXXRQXSPPP 881
PP P P P P PPP PPP
Sbjct: 9 PPPPPPPPGFEPPSQPPP-----PPPP 30
Score = 23.8 bits (49), Expect(2) = 1.9
Identities = 9/21 (42%), Positives = 9/21 (42%)
Frame = +1
Query: 796 PXXHXPPQXXPXXXPXPPXPP 858
P PP P P PP PP
Sbjct: 10 PPPPPPPGFEPPSQPPPPPPP 30
Score = 22.2 bits (45), Expect(2) = 1.9
Identities = 7/12 (58%), Positives = 7/12 (58%)
Frame = +1
Query: 676 PPXGXPXXPPPP 711
PP P PPPP
Sbjct: 5 PPGNPPPPPPPP 16
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,128,936
Number of Sequences: 5004
Number of extensions: 32044
Number of successful extensions: 283
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 74
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 200
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 446488370
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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