Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP14_F_P23
(1004 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 35 0.016
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 33 0.084
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 29 0.78
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 29 1.0
SPBC317.01 |mbx2|pvg4|MADS-box transcription factor Pvg4|Schizos... 29 1.4
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 29 1.4
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 27 3.2
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 27 5.5
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 26 7.3
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 26 8.3
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 35.1 bits (77), Expect = 0.016
Identities = 30/105 (28%), Positives = 35/105 (33%), Gaps = 2/105 (1%)
Frame = +2
Query: 269 GXSEXRPAQASRSRSTXPXTPVXGRXPTPSXLCRLPTSXXPMPXXLRPFXXRTRNPPSPT 448
G + R S + + P P PTP R PTS P P P PS
Sbjct: 108 GMPKLRHIGKSSASAAPPSAPAP---PTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKA 164
Query: 449 DSHPXTLXPXTXTXVXPXXSXLAPP--PXXPXXHXPXXPXTPSPP 577
P +L P P +PP P P P P P PP
Sbjct: 165 PPIPSSLPP----PAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPP 205
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 32.7 bits (71), Expect = 0.084
Identities = 30/105 (28%), Positives = 35/105 (33%), Gaps = 5/105 (4%)
Frame = +2
Query: 269 GXSEXRPAQASRSRSTXPXTPVXGRXPTPSXLCRLPTSXXPMPXXLR-----PFXXRTRN 433
G S +PA SR+ S P PT S P P P + P TR
Sbjct: 889 GASSAQPAAMSRTSSVSTLPPPP---PTASMTASAPAIASPPPPKVGETYHPPTASGTRV 945
Query: 434 PPSPTDSHPXTLXPXTXTXVXPXXSXLAPPPXXPXXHXPXXPXTP 568
PP SHP P S ++ P P P P TP
Sbjct: 946 PPVQQPSHPNPYTPVAPQSPVAAASRISSSPNMP----PSNPYTP 986
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 29.5 bits (63), Expect = 0.78
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = +3
Query: 510 SWPPPPXTXRXTRPXXHXPHPPXPXPPXPPPP 605
S PP P + +RP P P PP PPP
Sbjct: 228 SAPPIPPSIPSSRPPERVPSLSAPAPPPIPPP 259
Score = 27.9 bits (59), Expect = 2.4
Identities = 23/86 (26%), Positives = 24/86 (27%)
Frame = +2
Query: 329 PVXGRXPTPSXLCRLPTSXXPMPXXLRPFXXRTRNPPSPTDSHPXTLXPXTXTXVXPXXS 508
P GR P P R S P P P PP S T T + P
Sbjct: 370 PSTGRQPPPLSSSRA-VSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAP 428
Query: 509 XLAPPPXXPXXHXPXXPXTPSPPXRP 586
PP P P PP P
Sbjct: 429 PSLPPSAPPSLPMGAPAAPPLPPSAP 454
Score = 27.5 bits (58), Expect = 3.2
Identities = 11/30 (36%), Positives = 12/30 (40%)
Frame = +3
Query: 516 PPPPXTXRXTRPXXHXPHPPXPXPPXPPPP 605
PPPP +P PP PPPP
Sbjct: 314 PPPPSRRNRGKPPIGNGSSNSSLPPPPPPP 343
Score = 27.1 bits (57), Expect = 4.2
Identities = 23/90 (25%), Positives = 31/90 (34%), Gaps = 10/90 (11%)
Frame = +2
Query: 347 PTPSXLCRLPTSXXPMPXXLRPFXXRTRNPPSPTDSHPXTLXPXTXTXV---------XP 499
P P+ R + P+ R PPS S P +L P + P
Sbjct: 391 PPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLP 450
Query: 500 XXSXLAPP-PXXPXXHXPXXPXTPSPPXRP 586
+ +APP P P P P+PP P
Sbjct: 451 PSAPIAPPLPAGMPAAPPLPPAAPAPPPAP 480
Score = 26.6 bits (56), Expect = 5.5
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = +3
Query: 510 SWPPPPXTXRXTRPXXHXPHPPXPXPPXPPPP 605
S PPPP R + P PP PPPP
Sbjct: 335 SLPPPPPPPR-SNAAGSIPLPPQGRSAPPPPP 365
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 29.1 bits (62), Expect = 1.0
Identities = 16/45 (35%), Positives = 17/45 (37%), Gaps = 3/45 (6%)
Frame = +3
Query: 480 PXXXXHRXXXSWPPPPXTXRXTRPXXHXPHPP---XPXPPXPPPP 605
P H+ PPPP P H P PP P PPPP
Sbjct: 209 PPPMHHKPGEHMPPPP---MHHEPGEHMPPPPMHHEPGEHMPPPP 250
Score = 28.3 bits (60), Expect = 1.8
Identities = 16/45 (35%), Positives = 16/45 (35%), Gaps = 3/45 (6%)
Frame = +3
Query: 480 PXXXXHRXXXSWPPPPXTXRXTRPXXHXPHPP---XPXPPXPPPP 605
P H PPPP P H P PP P PPPP
Sbjct: 222 PPPMHHEPGEHMPPPP---MHHEPGEHMPPPPMHHEPGEHMPPPP 263
Score = 28.3 bits (60), Expect = 1.8
Identities = 16/45 (35%), Positives = 16/45 (35%), Gaps = 3/45 (6%)
Frame = +3
Query: 480 PXXXXHRXXXSWPPPPXTXRXTRPXXHXPHPP---XPXPPXPPPP 605
P H PPPP P H P PP P PPPP
Sbjct: 235 PPPMHHEPGEHMPPPP---MHHEPGEHMPPPPMHHEPGEHMPPPP 276
Score = 28.3 bits (60), Expect = 1.8
Identities = 16/45 (35%), Positives = 16/45 (35%), Gaps = 3/45 (6%)
Frame = +3
Query: 480 PXXXXHRXXXSWPPPPXTXRXTRPXXHXPHPP---XPXPPXPPPP 605
P H PPPP P H P PP P PPPP
Sbjct: 248 PPPMHHEPGEHMPPPP---MHHEPGEHMPPPPMHHEPGEHMPPPP 289
Score = 28.3 bits (60), Expect = 1.8
Identities = 16/45 (35%), Positives = 16/45 (35%), Gaps = 3/45 (6%)
Frame = +3
Query: 480 PXXXXHRXXXSWPPPPXTXRXTRPXXHXPHPP---XPXPPXPPPP 605
P H PPPP P H P PP P PPPP
Sbjct: 261 PPPMHHEPGEHMPPPP---MHHEPGEHMPPPPMHHEPGEHMPPPP 302
Score = 28.3 bits (60), Expect = 1.8
Identities = 16/45 (35%), Positives = 16/45 (35%), Gaps = 3/45 (6%)
Frame = +3
Query: 480 PXXXXHRXXXSWPPPPXTXRXTRPXXHXPHPP---XPXPPXPPPP 605
P H PPPP P H P PP P PPPP
Sbjct: 274 PPPMHHEPGEHMPPPP---MHHEPGEHMPPPPMHHEPGEHMPPPP 315
Score = 28.3 bits (60), Expect = 1.8
Identities = 16/45 (35%), Positives = 16/45 (35%), Gaps = 3/45 (6%)
Frame = +3
Query: 480 PXXXXHRXXXSWPPPPXTXRXTRPXXHXPHPP---XPXPPXPPPP 605
P H PPPP P H P PP P PPPP
Sbjct: 287 PPPMHHEPGEHMPPPP---MHHEPGEHMPPPPMHHEPGEHMPPPP 328
Score = 28.3 bits (60), Expect = 1.8
Identities = 16/45 (35%), Positives = 16/45 (35%), Gaps = 3/45 (6%)
Frame = +3
Query: 480 PXXXXHRXXXSWPPPPXTXRXTRPXXHXPHPP---XPXPPXPPPP 605
P H PPPP P H P PP P PPPP
Sbjct: 300 PPPMHHEPGEHMPPPP---MHHEPGEHMPPPPMHHEPGEHMPPPP 341
Score = 27.9 bits (59), Expect = 2.4
Identities = 15/40 (37%), Positives = 16/40 (40%), Gaps = 3/40 (7%)
Frame = +3
Query: 495 HRXXXSWPPPPXTXRXTRPXXHXPHPP---XPXPPXPPPP 605
H PPPP +P H P PP P PPPP
Sbjct: 201 HEPGEHMPPPP---MHHKPGEHMPPPPMHHEPGEHMPPPP 237
>SPBC317.01 |mbx2|pvg4|MADS-box transcription factor
Pvg4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 372
Score = 28.7 bits (61), Expect = 1.4
Identities = 13/35 (37%), Positives = 14/35 (40%)
Frame = +3
Query: 498 RXXXSWPPPPXTXRXTRPXXHXPHPPXPXPPXPPP 602
R +PP TRP H PHP PPP
Sbjct: 158 RSCPPFPPTQHHHPHTRPPHHPPHPHFHNNNYPPP 192
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 28.7 bits (61), Expect = 1.4
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +1
Query: 658 PPPXIXXTPPXRXXPPPPP 714
PPP PP + PPPPP
Sbjct: 12 PPPPPGFEPPSQPPPPPPP 30
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 27.5 bits (58), Expect = 3.2
Identities = 22/88 (25%), Positives = 26/88 (29%), Gaps = 2/88 (2%)
Frame = +2
Query: 320 PXTPVX-GRXPTPSXLCRLPTSXXPMPXXLRPFXXRTRNP-PSPTDSHPXTLXPXTXTXV 493
P PV G P P P P P P P+P+ P P
Sbjct: 1131 PPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPP 1190
Query: 494 XPXXSXLAPPPXXPXXHXPXXPXTPSPP 577
P S P P P P + +PP
Sbjct: 1191 VPPPSEAPPVPKPSVGVPPVPPPSTAPP 1218
Score = 26.6 bits (56), Expect = 5.5
Identities = 25/104 (24%), Positives = 31/104 (29%), Gaps = 9/104 (8%)
Frame = +2
Query: 290 AQASRSRSTXPXTPVXGRXPTPSXLCRLP--------TSXXPMPXXLRPFXXRTRNPPSP 445
A S+ ST P P+ P P + P P+P P T PP P
Sbjct: 994 APLSKPVSTSPAAPLARVPPVPKLSSKAPPVPLPSADAPPIPVPSTAPPVPIPTSTPPVP 1053
Query: 446 -TDSHPXTLXPXTXTXVXPXXSXLAPPPXXPXXHXPXXPXTPSP 574
+ S + P S AP P P P P
Sbjct: 1054 KSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKP 1097
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 26.6 bits (56), Expect = 5.5
Identities = 11/29 (37%), Positives = 11/29 (37%)
Frame = +3
Query: 519 PPPXTXRXTRPXXHXPHPPXPXPPXPPPP 605
PP P P PP P PPPP
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPP 1718
Score = 26.6 bits (56), Expect = 5.5
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = +3
Query: 510 SWPPPPXTXRXTRPXXHXPHPPXPXPPXPPPP 605
S P PP P P P P PPPP
Sbjct: 1703 SAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 26.2 bits (55), Expect = 7.3
Identities = 13/31 (41%), Positives = 13/31 (41%), Gaps = 1/31 (3%)
Frame = +3
Query: 516 PPPPXTXRXTRPXXHXP-HPPXPXPPXPPPP 605
PPPP T P PP P PPPP
Sbjct: 734 PPPPAVIVPTPAPAPIPVPPPAPIMGGPPPP 764
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 25.8 bits (54), Expect = 9.6
Identities = 11/30 (36%), Positives = 11/30 (36%)
Frame = +3
Query: 516 PPPPXTXRXTRPXXHXPHPPXPXPPXPPPP 605
PP P P P PP PPPP
Sbjct: 168 PPSFQPPSAAAPATSLPSDYNPPPPPPPPP 197
Score = 25.8 bits (54), Expect = 9.6
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = +3
Query: 519 PPPXTXRXTRPXXHXPHPPXPXPPXPPP 602
PP T + P P PP P PP PP
Sbjct: 224 PPTYTPKQADPL---PAPPPPPPPTLPP 248
Score = 23.0 bits (47), Expect(2) = 8.3
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +1
Query: 703 PPPPXPTPP 729
PPPP P PP
Sbjct: 189 PPPPPPPPP 197
Score = 21.0 bits (42), Expect(2) = 8.3
Identities = 7/13 (53%), Positives = 7/13 (53%)
Frame = +1
Query: 682 PPXRXXPPPPPXP 720
P PPPPP P
Sbjct: 184 PSDYNPPPPPPPP 196
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,103,020
Number of Sequences: 5004
Number of extensions: 37283
Number of successful extensions: 252
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 73
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 192
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 521265546
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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