Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP14_F_P23
         (1004 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        42   7e-06
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        42   7e-06
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        42   7e-06
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             26   0.62 
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    25   0.81 
DQ435335-1|ABD92650.1|  135|Apis mellifera OBP18 protein.              24   1.9  
DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.              23   4.3  
DQ435334-1|ABD92649.1|  135|Apis mellifera OBP17 protein.              22   7.6  
DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.              22   7.6  

>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 42.3 bits (95), Expect = 7e-06
 Identities = 20/71 (28%), Positives = 34/71 (47%)
 Frame = +3

Query: 129 ICACVNAAKITYKICVPSQHLKACQDMVDIPTKSKVTLDCIPXRXRMXCLNXVQXRXADL 308
           + A  +++   + ICVP  + K C +M        + + CI  R R  C+  V  + AD+
Sbjct: 23  VIAAQDSSGRIFTICVPEIYSKECDEMKKDSAVKGIPVSCISGRDRYECIEKVGKKEADV 82

Query: 309 VPLXPEHLXXA 341
           V + PE +  A
Sbjct: 83  VAVDPEDMYLA 93


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 42.3 bits (95), Expect = 7e-06
 Identities = 20/71 (28%), Positives = 34/71 (47%)
 Frame = +3

Query: 129 ICACVNAAKITYKICVPSQHLKACQDMVDIPTKSKVTLDCIPXRXRMXCLNXVQXRXADL 308
           + A  +++   + ICVP  + K C +M        + + CI  R R  C+  V  + AD+
Sbjct: 23  VIAAQDSSGRIFTICVPEIYSKECDEMKKDSAVKGIPVSCISGRDRYECIEKVGKKEADV 82

Query: 309 VPLXPEHLXXA 341
           V + PE +  A
Sbjct: 83  VAVDPEDMYLA 93


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 42.3 bits (95), Expect = 7e-06
 Identities = 20/71 (28%), Positives = 34/71 (47%)
 Frame = +3

Query: 129 ICACVNAAKITYKICVPSQHLKACQDMVDIPTKSKVTLDCIPXRXRMXCLNXVQXRXADL 308
           + A  +++   + ICVP  + K C +M        + + CI  R R  C+  V  + AD+
Sbjct: 23  VIAAQDSSGRIFTICVPEIYSKECDEMKKDSAVKGIPVSCISGRDRYECIEKVGKKEADV 82

Query: 309 VPLXPEHLXXA 341
           V + PE +  A
Sbjct: 83  VAVDPEDMYLA 93


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 25.8 bits (54), Expect = 0.62
 Identities = 12/37 (32%), Positives = 18/37 (48%)
 Frame = +2

Query: 377 TSXXPMPXXLRPFXXRTRNPPSPTDSHPXTLXPXTXT 487
           +S  P+P  L     R  +PP+ + S P T+   T T
Sbjct: 77  SSCDPVPGNLEQIGSRPLHPPASSTSLPATITTTTTT 113


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 25.4 bits (53), Expect = 0.81
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +1

Query: 679 TPPXRXXPPPPPXPTPP 729
           TPP    PPPPP  + P
Sbjct: 337 TPPKPAPPPPPPSSSGP 353



 Score = 25.4 bits (53), Expect = 0.81
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = +3

Query: 570 PPXPXPPXPPP 602
           PP P PP PPP
Sbjct: 338 PPKPAPPPPPP 348


>DQ435335-1|ABD92650.1|  135|Apis mellifera OBP18 protein.
          Length = 135

 Score = 24.2 bits (50), Expect = 1.9
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +3

Query: 102 LKYFILITLICACVNA 149
           +K F++I+ IC CV A
Sbjct: 1   MKTFVIISAICVCVGA 16


>DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.
          Length = 135

 Score = 23.0 bits (47), Expect = 4.3
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +3

Query: 102 LKYFILITLICACVNA 149
           +K F++I  IC CV A
Sbjct: 1   MKTFVIIFAICVCVGA 16


>DQ435334-1|ABD92649.1|  135|Apis mellifera OBP17 protein.
          Length = 135

 Score = 22.2 bits (45), Expect = 7.6
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +3

Query: 102 LKYFILITLICACVNA 149
           +K  ++I+ IC CV+A
Sbjct: 1   MKTIVIISAICVCVSA 16


>DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.
          Length = 135

 Score = 22.2 bits (45), Expect = 7.6
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +3

Query: 102 LKYFILITLICACVNAAKI 158
           +K  ++I+ IC CV A  I
Sbjct: 1   MKTILIISAICICVGALSI 19


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,230
Number of Sequences: 438
Number of extensions: 4635
Number of successful extensions: 22
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 33379164
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)