Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP14_F_P21
(887 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_1404 - 29928792-29929040,29929147-29929551,29930130-299302... 54 1e-07
12_02_0522 - 19960092-19960595,19962737-19962880,19963042-199631... 39 0.005
09_04_0548 - 18469636-18470037,18471164-18472705,18474052-184744... 38 0.011
09_04_0546 - 18460309-18461859,18462593-18463015,18463415-18463540 38 0.011
08_02_1151 - 24712200-24713750,24714587-24715009,24716076-24716201 38 0.011
08_02_1073 - 24117834-24118037,24118122-24118211,24118299-241184... 38 0.014
04_01_0042 + 473912-474058,474208-474349,474442-476264 38 0.014
04_04_1046 + 30405805-30405858,30405991-30407950,30408460-30408476 35 0.099
09_04_0497 - 18096299-18096496,18096586-18096675,18096809-180969... 33 0.23
02_05_0686 - 30900748-30902167,30903442-30904742 32 0.53
11_06_0610 - 25449085-25453284 32 0.70
01_01_0715 - 5542648-5543219,5543352-5543544 32 0.70
01_06_0565 + 30287253-30287502,30287522-30289010,30289133-302892... 31 1.2
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 31 1.6
05_06_0098 + 25560158-25560925 30 2.8
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 30 2.8
03_01_0515 - 3864796-3865425 30 2.8
03_05_1138 + 30684014-30684386,30684480-30684865,30684870-306849... 29 3.7
01_03_0117 + 12684729-12685886,12685978-12686145,12686292-126863... 29 3.7
03_05_0576 + 25765137-25766420 29 4.9
12_02_1174 - 26696869-26698191 29 6.5
08_01_0256 + 2102044-2102883,2104208-2104741,2104838-2104945 29 6.5
05_07_0228 - 28526885-28527046,28527151-28527241,28528315-285284... 29 6.5
02_04_0179 + 20682852-20684510,20684593-20684661,20684741-206848... 29 6.5
02_05_1011 + 33487670-33487958,33490794-33492100,33492541-334928... 28 8.6
>06_03_1404 -
29928792-29929040,29929147-29929551,29930130-29930280,
29930363-29930501,29930578-29930743,29930826-29931041,
29931142-29931323,29931412-29931538,29931974-29932112,
29932227-29932353,29932501-29932612,29932704-29932784,
29933330-29933483,29933569-29933689,29934003-29934045,
29934356-29934460
Length = 838
Score = 54.4 bits (125), Expect = 1e-07
Identities = 31/67 (46%), Positives = 40/67 (59%)
Frame = +1
Query: 322 LGSSREGSRTDAEAVLREEEAISPDALSVAQMKELRDRAQNYTFQTEVNRMMKLIINSLY 501
+G G TD+E V RE E+IS K LR A+ + FQ EV+R+M +IINSLY
Sbjct: 74 IGGVPHGLSTDSEVVQREAESIS--------RKTLRSSAEKFEFQAEVSRLMDIIINSLY 125
Query: 502 RNKEIXL 522
NK+I L
Sbjct: 126 SNKDIFL 132
>12_02_0522 -
19960092-19960595,19962737-19962880,19963042-19963131,
19963215-19963320,19963400-19963574,19963849-19963951,
19964382-19964636,19964726-19964803,19964908-19965000,
19965091-19965222,19965898-19966002,19966127-19966201,
19966284-19966340,19966419-19966532,19966613-19966756,
19966886-19966969,19967071-19967164,19967244-19967369,
19967507-19967580,19967672-19967875,19968234-19968388,
19968860-19968947,19969505-19969730,19970235-19970286,
19970766-19970958,19973221-19973314,19973744-19973788,
19974874-19974896
Length = 1210
Score = 39.1 bits (87), Expect = 0.005
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Frame = +1
Query: 340 GSRTDAEAVLREEEAISPDALSVAQMKELRDR--AQNYTFQTEVNRMMKLIINSLYRNKE 513
G+ A LRE + S A + D + + +Q EVNR+M LI++SLY NKE
Sbjct: 318 GTDNAASLKLREGSLVGRRYESSAAAVDSSDTPPVEKHEYQAEVNRLMDLIVHSLYSNKE 377
Query: 514 IXL 522
+ L
Sbjct: 378 VFL 380
>09_04_0548 -
18469636-18470037,18471164-18472705,18474052-18474474,
18474874-18474999
Length = 830
Score = 37.9 bits (84), Expect = 0.011
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = +1
Query: 424 LRDRAQNYTFQTEVNRMMKLIINSLYRNKEIXL 522
+ + + FQ E+N+++ LIIN+ Y NKEI L
Sbjct: 1 MASETETFAFQAEINQLLSLIINTFYSNKEIFL 33
>09_04_0546 - 18460309-18461859,18462593-18463015,18463415-18463540
Length = 699
Score = 37.9 bits (84), Expect = 0.011
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = +1
Query: 424 LRDRAQNYTFQTEVNRMMKLIINSLYRNKEIXL 522
+ + + FQ E+N+++ LIIN+ Y NKEI L
Sbjct: 1 MASETETFAFQAEINQLLSLIINTFYSNKEIFL 33
>08_02_1151 - 24712200-24713750,24714587-24715009,24716076-24716201
Length = 699
Score = 37.9 bits (84), Expect = 0.011
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = +1
Query: 424 LRDRAQNYTFQTEVNRMMKLIINSLYRNKEIXL 522
+ + + FQ E+N+++ LIIN+ Y NKEI L
Sbjct: 1 MASETETFAFQAEINQLLSLIINTFYSNKEIFL 33
>08_02_1073 -
24117834-24118037,24118122-24118211,24118299-24118404,
24118477-24118648,24118737-24118839,24118927-24119181,
24119259-24119336,24119449-24119541,24119660-24119800,
24119882-24119986,24120135-24120212,24120297-24120341,
24120463-24120579,24120685-24120828,24120934-24121017,
24121139-24121232,24121322-24121447,24121585-24121658,
24121870-24122098,24123124-24123611,24123702-24123749,
24123841-24124077,24124368-24124404,24125011-24125018
Length = 1051
Score = 37.5 bits (83), Expect = 0.014
Identities = 16/40 (40%), Positives = 27/40 (67%)
Frame = +1
Query: 403 SVAQMKELRDRAQNYTFQTEVNRMMKLIINSLYRNKEIXL 522
+VA+ E + + +Q EV+R+M LI++SLY +KE+ L
Sbjct: 330 AVAEKAEETAEEEKFEYQAEVSRLMDLIVHSLYSHKEVFL 369
>04_01_0042 + 473912-474058,474208-474349,474442-476264
Length = 703
Score = 37.5 bits (83), Expect = 0.014
Identities = 14/28 (50%), Positives = 21/28 (75%)
Frame = +1
Query: 439 QNYTFQTEVNRMMKLIINSLYRNKEIXL 522
+ + FQ E+N+++ LIIN+ Y NKEI L
Sbjct: 13 ETFAFQAEINQLLSLIINTFYSNKEIFL 40
>04_04_1046 + 30405805-30405858,30405991-30407950,30408460-30408476
Length = 676
Score = 34.7 bits (76), Expect = 0.099
Identities = 26/75 (34%), Positives = 33/75 (44%)
Frame = +3
Query: 663 SSTPAXRMNPPRPHSTTSGTIXNXGPPRDSPVPXCKTGXKXGXPPT*PALIRPSXGVXXS 842
SST + PP P S+TSG+ + PPRD+ + G PP+ L P G
Sbjct: 454 SSTYSSSSCPPEPTSSTSGSTSSWVPPRDNASSWAPPPPR-GNPPSWVPLPPPPGG---- 508
Query: 843 XSXXPXWXRPRPPLP 887
P W P PP P
Sbjct: 509 --NAPSWV-PPPPQP 520
>09_04_0497 -
18096299-18096496,18096586-18096675,18096809-18096914,
18097005-18097179,18097263-18097365,18097458-18097712,
18097791-18097868,18097986-18098078,18098179-18098319,
18098406-18098510,18098658-18098738,18098825-18098866,
18098966-18099082,18099208-18099351,18099485-18099568,
18099683-18099803,18099863-18099988,18100106-18100179,
18100388-18100657
Length = 800
Score = 33.5 bits (73), Expect = 0.23
Identities = 12/28 (42%), Positives = 22/28 (78%)
Frame = +1
Query: 439 QNYTFQTEVNRMMKLIINSLYRNKEIXL 522
+ + +Q EV+R++ LI++SLY +KE+ L
Sbjct: 83 EQFEYQAEVSRLLDLIVHSLYSHKEVFL 110
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 32.3 bits (70), Expect = 0.53
Identities = 25/95 (26%), Positives = 31/95 (32%)
Frame = +3
Query: 603 PTPXSASASXXEPPXAGCCXSSTPAXRMNPPRPHSTTSGTIXNXGPPRDSPVPXCKTGXK 782
P+P A A+ P P R +P RP S + + + PP P P K
Sbjct: 271 PSPAPAPAARPASPSPSL---PLPPGRESPSRPQSIAAAAVASPAPP---PPPPPKPAAA 324
Query: 783 XGXPPT*PALIRPSXGVXXSXSXXPXWXRPRPPLP 887
PP P P P P PP P
Sbjct: 325 APPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPP 359
Score = 30.7 bits (66), Expect = 1.6
Identities = 21/68 (30%), Positives = 23/68 (33%)
Frame = +3
Query: 603 PTPXSASASXXEPPXAGCCXSSTPAXRMNPPRPHSTTSGTIXNXGPPRDSPVPXCKTGXK 782
P P A+A+ PP P PP P G P SP P G K
Sbjct: 317 PPPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPP---AKGPPPPPPPKGPSPPPPPPPGGK 373
Query: 783 XGXPPT*P 806
G PP P
Sbjct: 374 KGGPPPPP 381
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 31.9 bits (69), Expect = 0.70
Identities = 23/69 (33%), Positives = 27/69 (39%), Gaps = 3/69 (4%)
Frame = +3
Query: 603 PTPXSASASXXEPPXAGCCXS---STPAXRMNPPRPHSTTSGTIXNXGPPRDSPVPXCKT 773
PTP S ++S P G S STP +PP P S S P +P P T
Sbjct: 619 PTPESKASSPPPPAPEGHTPSPPESTPPSEKSPPTPESKASSP-PPPTPEGHTPSPPKST 677
Query: 774 GXKXGXPPT 800
PPT
Sbjct: 678 PPTEKSPPT 686
Score = 31.9 bits (69), Expect = 0.70
Identities = 23/69 (33%), Positives = 27/69 (39%), Gaps = 3/69 (4%)
Frame = +3
Query: 603 PTPXSASASXXEPPXAGCCXS---STPAXRMNPPRPHSTTSGTIXNXGPPRDSPVPXCKT 773
PTP S ++S P G S STP +PP P S +S P P P T
Sbjct: 652 PTPESKASSPPPPTPEGHTPSPPKSTPPTEKSPPTPESESSSP-PPPAPEGHMPSPPKST 710
Query: 774 GXKXGXPPT 800
PPT
Sbjct: 711 PPVEKSPPT 719
Score = 31.9 bits (69), Expect = 0.70
Identities = 23/71 (32%), Positives = 28/71 (39%), Gaps = 3/71 (4%)
Frame = +3
Query: 603 PTPXSASASXXEPPXAGCCXS---STPAXRMNPPRPHSTTSGTIXNXGPPRDSPVPXCKT 773
PTP S S+S P G S STP +PP P S S P +P P +
Sbjct: 685 PTPESESSSPPPPAPEGHMPSPPKSTPPVEKSPPTPESEASSP-PPPAPEGHTPSPPKSS 743
Query: 774 GXKXGXPPT*P 806
+ PP P
Sbjct: 744 PPEEKSPPIPP 754
>01_01_0715 - 5542648-5543219,5543352-5543544
Length = 254
Score = 31.9 bits (69), Expect = 0.70
Identities = 19/58 (32%), Positives = 24/58 (41%)
Frame = +3
Query: 603 PTPXSASASXXEPPXAGCCXSSTPAXRMNPPRPHSTTSGTIXNXGPPRDSPVPXCKTG 776
P P + PP G + +PA MN P T+GT PPR S P + G
Sbjct: 182 PAPAGSPPPPPPPPAGGNFTAPSPAGGMNFTAPAPGTNGTA--APPPRPSSAPSVRGG 237
Score = 30.3 bits (65), Expect = 2.1
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +3
Query: 615 SASASXXEPPXAGCCXSSTPAXRMNPPRPHSTTSGTIXNXGPPRDSPVP 761
+A+ + PP ++ P R +PP P + T+GT PP +P P
Sbjct: 137 TATPTTPSPPPPPTVPAA-PTPRPSPPPPAAGTNGTARAPSPPVPAPAP 184
>01_06_0565 +
30287253-30287502,30287522-30289010,30289133-30289277,
30289679-30289729
Length = 644
Score = 31.1 bits (67), Expect = 1.2
Identities = 19/50 (38%), Positives = 21/50 (42%), Gaps = 2/50 (4%)
Frame = +3
Query: 609 PXSASASXXEPPXAGCCXSSTPAXRMNPPRPHSTTSGTIXNXG--PPRDS 752
P +S + P GC S TP PP P S TS T G PP S
Sbjct: 468 PSPSSGTSPSTPGGGCSSSPTPCDA--PPSPSSDTSPTTPGGGYYPPTPS 515
Score = 29.5 bits (63), Expect = 3.7
Identities = 19/51 (37%), Positives = 21/51 (41%)
Frame = +3
Query: 609 PXSASASXXEPPXAGCCXSSTPAXRMNPPRPHSTTSGTIXNXGPPRDSPVP 761
P +S + P GC S TP PP P S TS T G SP P
Sbjct: 132 PSPSSDTSPSTPGGGCSSSPTPCDA--PPSPSSDTSPTTPGGGGGY-SPTP 179
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 30.7 bits (66), Expect = 1.6
Identities = 29/99 (29%), Positives = 33/99 (33%), Gaps = 4/99 (4%)
Frame = +3
Query: 603 PTPXSASASXXEPPXAGCCXSSTPAXRMNPPRPHST----TSGTIXNXGPPRDSPVPXCK 770
P P S PP A + PA PP P S+ T + GPP P P
Sbjct: 640 PPPPSLPNRLVPPPPAPGIGNKFPAPPPPPPPPRSSSRTPTGAATSSKGPPPPPPPPLPP 699
Query: 771 TGXKXGXPPT*PALIRPSXGVXXSXSXXPXWXRPRPPLP 887
G P A P + S P P PPLP
Sbjct: 700 ANRTNG-PGVPSAPPPPPPPPPANRSNGP--SAPAPPLP 735
Score = 28.3 bits (60), Expect = 8.6
Identities = 28/95 (29%), Positives = 31/95 (32%), Gaps = 2/95 (2%)
Frame = +3
Query: 603 PTPXSASASXXEPPXAGCCXS-STPAXRMNPPRPHSTTSGTIXNXGPPRDSPVPXCKTGX 779
P SA PP A S PA + PP P + PP P P TG
Sbjct: 706 PGVPSAPPPPPPPPPANRSNGPSAPAPPLPPPLPAAANK-----RNPPAPPP-PPLMTGK 759
Query: 780 K-XGXPPT*PALIRPSXGVXXSXSXXPXWXRPRPP 881
K PP P +P V RP PP
Sbjct: 760 KAPAPPPPPPQAPKPPGTVPPPPPLHGASGRPHPP 794
>05_06_0098 + 25560158-25560925
Length = 255
Score = 29.9 bits (64), Expect = 2.8
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +3
Query: 603 PTPXSASASXXEPPXAGCCXSSTPAXRMNPPRPHSTTS 716
P S+S S P A SS+P+ PP P S++S
Sbjct: 5 PNSPSSSTSSSSPSSAAAAASSSPSSHRPPPPPPSSSS 42
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 29.9 bits (64), Expect = 2.8
Identities = 21/70 (30%), Positives = 23/70 (32%)
Frame = +3
Query: 603 PTPXSASASXXEPPXAGCCXSSTPAXRMNPPRPHSTTSGTIXNXGPPRDSPVPXCKTGXK 782
P P A + PP S+ A PP P GP P P G
Sbjct: 321 PPPPPAHPAAPAPPPPAPSPSAAGAGSGPPPPPPPAAPAAPRPPGPGPGPPPPPGAAGRG 380
Query: 783 XGXPPT*PAL 812
G PP PAL
Sbjct: 381 GGGPPP-PAL 389
>03_01_0515 - 3864796-3865425
Length = 209
Score = 29.9 bits (64), Expect = 2.8
Identities = 17/52 (32%), Positives = 19/52 (36%)
Frame = +3
Query: 603 PTPXSASASXXEPPXAGCCXSSTPAXRMNPPRPHSTTSGTIXNXGPPRDSPV 758
P P +A PP SS P + PP P S PP SPV
Sbjct: 61 PPPPAAGPLMPPPPPPPSVTSSPPPPPLPPPPPPPAASPPPPPPSPPPPSPV 112
>03_05_1138 +
30684014-30684386,30684480-30684865,30684870-30684962,
30684963-30685108,30685211-30685454,30685562-30685666,
30685774-30685956,30686052-30686738
Length = 738
Score = 29.5 bits (63), Expect = 3.7
Identities = 12/35 (34%), Positives = 23/35 (65%)
Frame = +2
Query: 14 PSHYREFLKILTSKCQEYMIKFTEMPNSLTGLLRV 118
P++Y+ F+ ILTS +I + + +++T +LRV
Sbjct: 453 PNNYQSFISILTSHVNNGIIPMSRIDDAVTRILRV 487
>01_03_0117 +
12684729-12685886,12685978-12686145,12686292-12686336,
12686438-12687280
Length = 737
Score = 29.5 bits (63), Expect = 3.7
Identities = 21/93 (22%), Positives = 29/93 (31%)
Frame = +3
Query: 603 PTPXSASASXXEPPXAGCCXSSTPAXRMNPPRPHSTTSGTIXNXGPPRDSPVPXCKTGXK 782
P+ A P A S +++P HST PP + PVP
Sbjct: 151 PSMPPAERPALPPTKAPAAISPATPPQLSPANAHSTHHHAKPPSLPPAEPPVPSPSPEHP 210
Query: 783 XGXPPT*PALIRPSXGVXXSXSXXPXWXRPRPP 881
P+ P P+ P P+PP
Sbjct: 211 PRHSPSKPPAYAPAKPPTALRPAIPPAAMPKPP 243
>03_05_0576 + 25765137-25766420
Length = 427
Score = 29.1 bits (62), Expect = 4.9
Identities = 18/50 (36%), Positives = 20/50 (40%)
Frame = +3
Query: 738 PPRDSPVPXCKTGXKXGXPPT*PALIRPSXGVXXSXSXXPXWXRPRPPLP 887
PP SP P + PP P P+ V S P RPRP LP
Sbjct: 68 PPSPSPSPSPSPPPQPSSPPPPPPSPPPAAAVSVSPPTQP---RPRPELP 114
>12_02_1174 - 26696869-26698191
Length = 440
Score = 28.7 bits (61), Expect = 6.5
Identities = 19/66 (28%), Positives = 24/66 (36%)
Frame = +3
Query: 690 PPRPHSTTSGTIXNXGPPRDSPVPXCKTGXKXGXPPT*PALIRPSXGVXXSXSXXPXWXR 869
PPRP S + P+ P P + PPT P ++P V P
Sbjct: 164 PPRPPSVKPPVVQ----PKPQPPPSLQPPSPPPPPPTRPPSVKPPV-VQPKPQPPPTLPP 218
Query: 870 PRPPLP 887
P PP P
Sbjct: 219 PSPPPP 224
Score = 28.3 bits (60), Expect = 8.6
Identities = 17/52 (32%), Positives = 21/52 (40%), Gaps = 2/52 (3%)
Frame = +3
Query: 738 PPRDSPVPXCKTGXKXGXPPT*--PALIRPSXGVXXSXSXXPXWXRPRPPLP 887
PP P P + + PP P +P+ G S S PRPPLP
Sbjct: 297 PPPSPPPPPQQPSQRYWTPPPAITPEPAKPAAGKPTSSSPPSTKDSPRPPLP 348
Score = 28.3 bits (60), Expect = 8.6
Identities = 16/47 (34%), Positives = 18/47 (38%)
Frame = +3
Query: 606 TPXSASASXXEPPXAGCCXSSTPAXRMNPPRPHSTTSGTIXNXGPPR 746
TP A P AG SS+P + PRP N G PR
Sbjct: 314 TPPPAITPEPAKPAAGKPTSSSPPSTKDSPRPPLPAPSPAANGGDPR 360
>08_01_0256 + 2102044-2102883,2104208-2104741,2104838-2104945
Length = 493
Score = 28.7 bits (61), Expect = 6.5
Identities = 15/38 (39%), Positives = 17/38 (44%)
Frame = +3
Query: 603 PTPXSASASXXEPPXAGCCXSSTPAXRMNPPRPHSTTS 716
P P +A+AS PP C SST A R P S
Sbjct: 112 PAPAAAAASEPLPPNLRFCVSSTDASRFPYTHPRGLPS 149
>05_07_0228 -
28526885-28527046,28527151-28527241,28528315-28528455,
28528560-28528625,28529180-28529317,28529759-28529860,
28530156-28530236,28530314-28530383,28530598-28530674,
28531035-28531483
Length = 458
Score = 28.7 bits (61), Expect = 6.5
Identities = 16/49 (32%), Positives = 21/49 (42%)
Frame = +3
Query: 609 PXSASASXXEPPXAGCCXSSTPAXRMNPPRPHSTTSGTIXNXGPPRDSP 755
P +A+ PP A PA M P P S +G + PPR +P
Sbjct: 47 PTNAATPNPSPPGASIVVVVRPA--MQPASPVSGDAGPVAEAVPPRGAP 93
>02_04_0179 +
20682852-20684510,20684593-20684661,20684741-20684809,
20686779-20688206
Length = 1074
Score = 28.7 bits (61), Expect = 6.5
Identities = 19/69 (27%), Positives = 26/69 (37%)
Frame = +3
Query: 603 PTPXSASASXXEPPXAGCCXSSTPAXRMNPPRPHSTTSGTIXNXGPPRDSPVPXCKTGXK 782
P P A+ + +PP + A PP+P +T + P P P T K
Sbjct: 44 PQPQQATVAEGDPPPPATGSAEEVAGNGEPPQPPATDPAS-----EPTAPPEPQRATEEK 98
Query: 783 XGXPPT*PA 809
G P PA
Sbjct: 99 KGDEPPPPA 107
>02_05_1011 +
33487670-33487958,33490794-33492100,33492541-33492853,
33493190-33494247
Length = 988
Score = 28.3 bits (60), Expect = 8.6
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +1
Query: 181 TSKSRWMFLTPAMKHIWLFGLGVLLLSGW 267
TS S W+FL P +WL L +G+
Sbjct: 572 TSTSMWIFLQPLTTSLWLASLAFFCFTGF 600
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,035,767
Number of Sequences: 37544
Number of extensions: 368883
Number of successful extensions: 981
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 880
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 970
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2495239620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -