Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP14_F_P21
(887 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68751-3|CAA92973.1| 760|Caenorhabditis elegans Hypothetical pr... 77 2e-14
Z75530-3|CAA99793.1| 702|Caenorhabditis elegans Hypothetical pr... 38 0.007
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 30 1.9
AL023828-7|CAA19452.1| 881|Caenorhabditis elegans Hypothetical ... 29 3.4
U29381-3|AAA68758.2| 617|Caenorhabditis elegans Hypothetical pr... 29 5.9
Z29117-15|CAA82385.1| 193|Caenorhabditis elegans Hypothetical p... 28 7.8
Z29117-14|CAA82386.1| 190|Caenorhabditis elegans Hypothetical p... 28 7.8
Z22179-16|CAA80172.1| 193|Caenorhabditis elegans Hypothetical p... 28 7.8
Z22179-15|CAA80173.1| 190|Caenorhabditis elegans Hypothetical p... 28 7.8
>Z68751-3|CAA92973.1| 760|Caenorhabditis elegans Hypothetical
protein T05E11.3 protein.
Length = 760
Score = 76.6 bits (180), Expect = 2e-14
Identities = 37/62 (59%), Positives = 47/62 (75%)
Frame = +1
Query: 337 EGSRTDAEAVLREEEAISPDALSVAQMKELRDRAQNYTFQTEVNRMMKLIINSLYRNKEI 516
E + + + REE++I D LSV+Q+KELR +A+ + FQ EVNRMMKLIINSLYRNKEI
Sbjct: 28 EDAPKETKEETREEDSIKLDGLSVSQIKELRSKAEKHEFQAEVNRMMKLIINSLYRNKEI 87
Query: 517 XL 522
L
Sbjct: 88 FL 89
>Z75530-3|CAA99793.1| 702|Caenorhabditis elegans Hypothetical
protein C47E8.5 protein.
Length = 702
Score = 38.3 bits (85), Expect = 0.007
Identities = 15/33 (45%), Positives = 23/33 (69%)
Frame = +1
Query: 424 LRDRAQNYTFQTEVNRMMKLIINSLYRNKEIXL 522
+ + A+ + FQ E+ ++M LIIN+ Y NKEI L
Sbjct: 1 MSENAETFAFQAEIAQLMSLIINTFYSNKEIYL 33
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 30.3 bits (65), Expect = 1.9
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = +3
Query: 603 PTPXSASASXXEPPXAGCCXSSTPAXRMNPPRPHSTTSGTIXNXGP 740
P P +AS+S P +TP+ PP P S ++ T + P
Sbjct: 587 PAPQAASSSQAAPTSGANTQPATPSASNQPPTPASASASTTLHVEP 632
>AL023828-7|CAA19452.1| 881|Caenorhabditis elegans Hypothetical
protein Y17G7B.5a protein.
Length = 881
Score = 29.5 bits (63), Expect = 3.4
Identities = 16/59 (27%), Positives = 25/59 (42%)
Frame = +1
Query: 325 GSSREGSRTDAEAVLREEEAISPDALSVAQMKELRDRAQNYTFQTEVNRMMKLIINSLY 501
G G D ++V EEE I D L + + +RD + E+ R K + S +
Sbjct: 122 GRRGRGDAADDDSVPMEEEDIPVDILENIRGRTIRDHVSDEAVAKEIERRFKNFLRSFH 180
>U29381-3|AAA68758.2| 617|Caenorhabditis elegans Hypothetical
protein F35D11.3 protein.
Length = 617
Score = 28.7 bits (61), Expect = 5.9
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +1
Query: 376 EEAISPDALSVAQMKELRDRAQNYTFQTEVNRMMKL 483
E SPD V Q + LR + YT + E N +M+L
Sbjct: 316 ESDTSPDQAFVHQWRHLRHTKEQYTLRYESNYLMEL 351
>Z29117-15|CAA82385.1| 193|Caenorhabditis elegans Hypothetical
protein C48B4.12b protein.
Length = 193
Score = 28.3 bits (60), Expect = 7.8
Identities = 15/59 (25%), Positives = 24/59 (40%), Gaps = 1/59 (1%)
Frame = +3
Query: 603 PTPXSASASXXEPPXAGCCXSSTPAXRMNPPRPHSTTSGTIXNXGP-PRDSPVPXCKTG 776
PTP + + +P ++P P P + T+ T P P ++P P K G
Sbjct: 79 PTPKPTTTTTVKPTSPTTLKMTSPTTTTKKPAPAAPTATTFWIRSPTPPNTPAPVVKGG 137
>Z29117-14|CAA82386.1| 190|Caenorhabditis elegans Hypothetical
protein C48B4.12a protein.
Length = 190
Score = 28.3 bits (60), Expect = 7.8
Identities = 15/59 (25%), Positives = 24/59 (40%), Gaps = 1/59 (1%)
Frame = +3
Query: 603 PTPXSASASXXEPPXAGCCXSSTPAXRMNPPRPHSTTSGTIXNXGP-PRDSPVPXCKTG 776
PTP + + +P ++P P P + T+ T P P ++P P K G
Sbjct: 76 PTPKPTTTTTVKPTSPTTLKMTSPTTTTKKPAPAAPTATTFWIRSPTPPNTPAPVVKGG 134
>Z22179-16|CAA80172.1| 193|Caenorhabditis elegans Hypothetical
protein C48B4.12b protein.
Length = 193
Score = 28.3 bits (60), Expect = 7.8
Identities = 15/59 (25%), Positives = 24/59 (40%), Gaps = 1/59 (1%)
Frame = +3
Query: 603 PTPXSASASXXEPPXAGCCXSSTPAXRMNPPRPHSTTSGTIXNXGP-PRDSPVPXCKTG 776
PTP + + +P ++P P P + T+ T P P ++P P K G
Sbjct: 79 PTPKPTTTTTVKPTSPTTLKMTSPTTTTKKPAPAAPTATTFWIRSPTPPNTPAPVVKGG 137
>Z22179-15|CAA80173.1| 190|Caenorhabditis elegans Hypothetical
protein C48B4.12a protein.
Length = 190
Score = 28.3 bits (60), Expect = 7.8
Identities = 15/59 (25%), Positives = 24/59 (40%), Gaps = 1/59 (1%)
Frame = +3
Query: 603 PTPXSASASXXEPPXAGCCXSSTPAXRMNPPRPHSTTSGTIXNXGP-PRDSPVPXCKTG 776
PTP + + +P ++P P P + T+ T P P ++P P K G
Sbjct: 76 PTPKPTTTTTVKPTSPTTLKMTSPTTTTKKPAPAAPTATTFWIRSPTPPNTPAPVVKGG 134
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,982,722
Number of Sequences: 27780
Number of extensions: 276549
Number of successful extensions: 609
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 566
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 604
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2244863852
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -