Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP14_F_P17
(927 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z37983-1|CAA86061.1| 276|Caenorhabditis elegans Hypothetical pr... 187 1e-47
U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical pr... 36 0.041
Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical pr... 36 0.054
Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical pr... 36 0.054
U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical pr... 36 0.054
U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical pr... 36 0.054
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 33 0.22
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 33 0.22
Z81573-2|CAB04626.1| 294|Caenorhabditis elegans Hypothetical pr... 30 2.0
U64609-7|AAB04604.3| 373|Caenorhabditis elegans Sperm-specific ... 30 2.0
Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical pr... 30 2.7
AC103567-8|AAL35729.1| 305|Caenorhabditis elegans Hypothetical ... 30 2.7
Z92837-1|CAB07400.1| 1043|Caenorhabditis elegans Hypothetical pr... 29 3.6
AY372076-1|AAQ75758.1| 1043|Caenorhabditis elegans SYM-4 protein. 29 3.6
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 29 6.2
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 29 6.2
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 29 6.2
>Z37983-1|CAA86061.1| 276|Caenorhabditis elegans Hypothetical
protein B0393.1 protein.
Length = 276
Score = 187 bits (455), Expect = 1e-47
Identities = 84/127 (66%), Positives = 104/127 (81%)
Frame = +3
Query: 108 MSGGLDVLALNEEDVTKMLAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWEKLVL 287
MSGG AL EEDV K+LA HLG+ N+NFQM+ YVYKRR DG ++IN+++TWEKL+L
Sbjct: 1 MSGGAAHSALTEEDVMKLLATQAHLGSTNLNFQMQQYVYKRRFDGPNIINVKKTWEKLLL 60
Query: 288 AARAVVAIENPADVFVISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPR 467
AARA+ A+ENPADV V+S+RP+ QRA+LKFAAHTGAT I GRF+PG TNQIQ F+EPR
Sbjct: 61 AARAIAAVENPADVVVVSARPYAQRALLKFAAHTGATAIFGRFSPGCLTNQIQKTFKEPR 120
Query: 468 LLIVLDP 488
LL++ DP
Sbjct: 121 LLVISDP 127
Score = 62.9 bits (146), Expect = 3e-10
Identities = 29/53 (54%), Positives = 36/53 (67%)
Frame = +1
Query: 496 DHQPITEASYVNIPVIALCXTDSPLTFVDIAIPCXTXSSHSIGLMLAGLLARE 654
DHQ +TEASYV +PVI+ T+SPL +DI +PC SIGLM +LARE
Sbjct: 130 DHQAVTEASYVGVPVISFVNTESPLKLIDIGVPCNNKGERSIGLMW-WMLARE 181
>U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical
protein C27A2.5 protein.
Length = 188
Score = 35.9 bits (79), Expect = 0.041
Identities = 16/42 (38%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Frame = +2
Query: 287 GCSCCRSHREPR*CVRHLITALRSACCTEVCRAHR-CYAYCG 409
GC CC + C R T R+ CCT C R C CG
Sbjct: 82 GCGCCCCRPKCCCCCRRCCTCCRTCCCTRCCTCCRPCCCGCG 123
>Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical
protein R13H4.8 protein.
Length = 212
Score = 35.5 bits (78), Expect = 0.054
Identities = 16/42 (38%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Frame = +2
Query: 287 GCSCCRSHREPR*CVRHLITALRSACCTEVCRAHR-CYAYCG 409
GC CC C R T R+ CCT C R C CG
Sbjct: 83 GCGCCCCRPRCCCCCRRCCTCCRTCCCTRCCTCCRPCCCGCG 124
>Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical
protein T01B7.8 protein.
Length = 164
Score = 35.5 bits (78), Expect = 0.054
Identities = 16/42 (38%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Frame = +2
Query: 287 GCSCCRSHREPR*CVRHLITALRSACCTEVCRAHR-CYAYCG 409
GC CC C R T R+ CCT C R C CG
Sbjct: 81 GCGCCCCRPRCCCCCRRCCTCCRTCCCTRCCTCCRPCCCGCG 122
>U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical
protein C04G6.10 protein.
Length = 166
Score = 35.5 bits (78), Expect = 0.054
Identities = 16/42 (38%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Frame = +2
Query: 287 GCSCCRSHREPR*CVRHLITALRSACCTEVCRAHR-CYAYCG 409
GC CC C R T R+ CCT C R C CG
Sbjct: 82 GCGCCCCRPRCCCCCRRCCTCCRTCCCTRCCTCCRPCCCGCG 123
>U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical
protein C04G6.7 protein.
Length = 197
Score = 35.5 bits (78), Expect = 0.054
Identities = 16/42 (38%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Frame = +2
Query: 287 GCSCCRSHREPR*CVRHLITALRSACCTEVCRAHR-CYAYCG 409
GC CC C R T R+ CCT C R C CG
Sbjct: 83 GCGCCCCRPRCCCCCRRCCTCCRTCCCTRCCTCCRPCCCGCG 124
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 33.5 bits (73), Expect = 0.22
Identities = 13/34 (38%), Positives = 15/34 (44%)
Frame = +3
Query: 825 PPPPXXXXPXXAPXXTXLXHTPPXLXATRXPPPP 926
PPPP P P + TPP + PPPP
Sbjct: 766 PPPPPPPPPHCEPTMVHVEFTPPSTSSVPPPPPP 799
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 33.5 bits (73), Expect = 0.22
Identities = 13/34 (38%), Positives = 15/34 (44%)
Frame = +3
Query: 825 PPPPXXXXPXXAPXXTXLXHTPPXLXATRXPPPP 926
PPPP P P + TPP + PPPP
Sbjct: 766 PPPPPPPPPHCEPTMVHVEFTPPSTSSVPPPPPP 799
>Z81573-2|CAB04626.1| 294|Caenorhabditis elegans Hypothetical
protein M02G9.3 protein.
Length = 294
Score = 30.3 bits (65), Expect = 2.0
Identities = 16/56 (28%), Positives = 23/56 (41%)
Frame = +2
Query: 284 SGCSCCRSHREPR*CVRHLITALRSACCTEVCRAHRCYAYCGTFHTRCFY*PDPSC 451
S SCC S C+ + +S+C T +C+ +C C T PSC
Sbjct: 38 SSSSCCSSSSSNSYCIPVCMAQCQSSCTTPICQ-QQCSNQCNQQCTSITISSGPSC 92
>U64609-7|AAB04604.3| 373|Caenorhabditis elegans Sperm-specific
family, class qprotein 4 protein.
Length = 373
Score = 30.3 bits (65), Expect = 2.0
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = -3
Query: 925 GGGGXRVAXXXGGVWXSXVXXGAXXGXXXXGGGG 824
GGGG + GG+ V GA G GGGG
Sbjct: 331 GGGGAKSGGGGGGIPGQSVYMGAGGGGGGGGGGG 364
>Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical
protein Y48E1B.1 protein.
Length = 497
Score = 29.9 bits (64), Expect = 2.7
Identities = 14/36 (38%), Positives = 16/36 (44%), Gaps = 2/36 (5%)
Frame = +3
Query: 825 PPPPXXXXPXXAPXXTXLXHT--PPXLXATRXPPPP 926
PPPP P P T + T PP + PPPP
Sbjct: 326 PPPPMKLDPSPQPAATPVEITEIPPIISPPAPPPPP 361
>AC103567-8|AAL35729.1| 305|Caenorhabditis elegans Hypothetical
protein Y51F10.2 protein.
Length = 305
Score = 29.9 bits (64), Expect = 2.7
Identities = 23/100 (23%), Positives = 42/100 (42%)
Frame = +3
Query: 465 RLLIVLDPGTRPSTHY*SFICQHSCDCFVXHRLPTNICGHCYPMXHXVFPLYWFDAGWLV 644
+L+ ++D + H SF+ C+ V H TNIC C P+ P + G ++
Sbjct: 91 QLIELMDSMRGEADHNISFLACVGCNG-VYHEKDTNICTTCSPIIKDAHPTELIEQGVIL 149
Query: 645 GT*XADAFVVCFPRDHRWDVXXPHXALPTRPPRXXLXKXQ 764
+ C RDH + H ++ +P R + + +
Sbjct: 150 NQYALCS--TCLLRDH---IKKNHVSISLQPLRVEMQRQE 184
>Z92837-1|CAB07400.1| 1043|Caenorhabditis elegans Hypothetical
protein R03E1.1 protein.
Length = 1043
Score = 29.5 bits (63), Expect = 3.6
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = +3
Query: 819 RXPPPPXXXXPXXAPXXTXLXHTPPXLXATRXPPP 923
R PPP P +P + L H PP R PPP
Sbjct: 234 RVPPPIPSRAPVMSPVQSPLTH-PPVAPMPRCPPP 267
>AY372076-1|AAQ75758.1| 1043|Caenorhabditis elegans SYM-4 protein.
Length = 1043
Score = 29.5 bits (63), Expect = 3.6
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = +3
Query: 819 RXPPPPXXXXPXXAPXXTXLXHTPPXLXATRXPPP 923
R PPP P +P + L H PP R PPP
Sbjct: 234 RVPPPIPSRAPVMSPVQSPLTH-PPVAPMPRCPPP 267
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 28.7 bits (61), Expect = 6.2
Identities = 15/42 (35%), Positives = 17/42 (40%)
Frame = -1
Query: 744 FGGGG*EGXXGAXQHPSGGHGGSTPRXRXXFTCQQASQHQTN 619
FG GG G GGHGG R F CQQ ++
Sbjct: 132 FGSGGGSFGGGNSGFGEGGHGGG-ERNNNCFNCQQPGHRSSD 172
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 28.7 bits (61), Expect = 6.2
Identities = 15/42 (35%), Positives = 17/42 (40%)
Frame = -1
Query: 744 FGGGG*EGXXGAXQHPSGGHGGSTPRXRXXFTCQQASQHQTN 619
FG GG G GGHGG R F CQQ ++
Sbjct: 132 FGSGGGSFGGGNSGFGEGGHGGG-ERNNNCFNCQQPGHRSSD 172
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 28.7 bits (61), Expect = 6.2
Identities = 15/42 (35%), Positives = 17/42 (40%)
Frame = -1
Query: 744 FGGGG*EGXXGAXQHPSGGHGGSTPRXRXXFTCQQASQHQTN 619
FG GG G GGHGG R F CQQ ++
Sbjct: 132 FGSGGGSFGGGNSGFGEGGHGGG-ERNNNCFNCQQPGHRSSD 172
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,268,424
Number of Sequences: 27780
Number of extensions: 465439
Number of successful extensions: 1523
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1147
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1460
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2381234086
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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