Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP14_F_P17
         (927 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    23   3.9  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    23   3.9  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    22   6.9  
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    22   9.1  

>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 23.0 bits (47), Expect = 3.9
 Identities = 11/39 (28%), Positives = 16/39 (41%)
 Frame = -3

Query: 691 WSRGKHTTXASAXHVPTSQPASNQ*SGKTXCXMG*QCPQ 575
           W+RG      SA  +P       +  G T C +  QC +
Sbjct: 437 WARGTKDIPISACSLPCEPGMIKKQQGDTCCWVCDQCEE 475


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 23.0 bits (47), Expect = 3.9
 Identities = 11/39 (28%), Positives = 16/39 (41%)
 Frame = -3

Query: 691 WSRGKHTTXASAXHVPTSQPASNQ*SGKTXCXMG*QCPQ 575
           W+RG      SA  +P       +  G T C +  QC +
Sbjct: 527 WARGTKDIPISACSLPCEPGMIKKQQGDTCCWVCDQCEE 565


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 22.2 bits (45), Expect = 6.9
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = -1

Query: 651 TCQQASQHQTNRVGRLGVAWDSNVH 577
           TCQ+A     N   +L V  D N+H
Sbjct: 389 TCQEAMHMLKNADSQLLVISDDNIH 413


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 21.8 bits (44), Expect = 9.1
 Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
 Frame = +3

Query: 54  FASQWHYTRLVVTQISATMSGGLDVLALNEEDVTKMLAATTHLGAENVNF-QMETYVYKR 230
           FAS   YT   +   S T+  G+  +AL+   +T+ L  +  L + N+N+   E +V  +
Sbjct: 229 FASDPRYTTFTINGESFTLQSGIFGMALS--PLTQNLYYSA-LSSHNLNYVNTEQFVKSQ 285

Query: 231 -RADGTH 248
            +A+  H
Sbjct: 286 YQANNVH 292


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 246,090
Number of Sequences: 438
Number of extensions: 6053
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 30234750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)